RNA–Protein interactions for RNA: ENST00000230480.10

VEGFA-201, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-201ENST00000230480 CBFA2T3O75081 653 aa13.83□□□□□ -0.2
VEGFA-201ENST00000230480 PCDH8O95206 1070 aa13.83□□□□□ -0.2
VEGFA-201ENST00000230480 ZRANB2O95218 330 aaKnown RBP eCLIP13.83□□□□□ -0.24e-17■■□□□ 11.4
VEGFA-201ENST00000230480 JCHAINP01591 159 aa13.83□□□□□ -0.2
VEGFA-201ENST00000230480 CCNB1P14635 433 aa13.83□□□□□ -0.2
VEGFA-201ENST00000230480 GNSP15586 552 aa13.83□□□□□ -0.2
VEGFA-201ENST00000230480 LHCGRP22888 699 aa13.83□□□□□ -0.2
VEGFA-201ENST00000230480 CD38P28907 300 aa13.83□□□□□ -0.2
VEGFA-201ENST00000230480 CD68P34810 354 aaPredicted RBP13.83□□□□□ -0.2
VEGFA-201ENST00000230480 AP1S1P61966 158 aa13.83□□□□□ -0.2
VEGFA-201ENST00000230480 PPP2R5EQ16537 467 aa13.83□□□□□ -0.2
VEGFA-201ENST00000230480 CDKN3Q16667 212 aa13.83□□□□□ -0.2
VEGFA-201ENST00000230480 KCTD16Q68DU8 428 aa13.83□□□□□ -0.2
VEGFA-201ENST00000230480 ZNF662Q6ZS27 426 aa13.83□□□□□ -0.2
VEGFA-201ENST00000230480 RFLNAQ6ZTI6 216 aa13.83□□□□□ -0.2
VEGFA-201ENST00000230480 BBS12Q6ZW61 710 aa13.83□□□□□ -0.2
VEGFA-201ENST00000230480 RABEPKQ7Z6M1 372 aa13.83□□□□□ -0.2
VEGFA-201ENST00000230480 RFX6Q8HWS3 928 aa13.83□□□□□ -0.2
VEGFA-201ENST00000230480 CCDC13Q8IYE1 715 aa13.83□□□□□ -0.2
VEGFA-201ENST00000230480 TP53I13Q8NBR0 393 aaPredicted RBP13.83□□□□□ -0.2
VEGFA-201ENST00000230480 OR13H1Q8NG92 308 aa13.83□□□□□ -0.2
VEGFA-201ENST00000230480 HES6Q96HZ4 224 aa13.83□□□□□ -0.2
VEGFA-201ENST00000230480 PPP1R16AQ96I34 528 aa13.83□□□□□ -0.2
VEGFA-201ENST00000230480 FEM1CQ96JP0 617 aa13.83□□□□□ -0.2
VEGFA-201ENST00000230480 CAMK1GQ96NX5 476 aa13.83□□□□□ -0.2
VEGFA-201ENST00000230480 LENG8Q96PV6 779 aaPredicted RBP13.83□□□□□ -0.2
VEGFA-201ENST00000230480 MYOCQ99972 504 aa13.83□□□□□ -0.2
VEGFA-201ENST00000230480 GORASP1Q9BQQ3 440 aa13.83□□□□□ -0.2
VEGFA-201ENST00000230480 HEMGNQ9BXL5 484 aa13.83□□□□□ -0.2
VEGFA-201ENST00000230480 CEP41Q9BYV8 373 aa13.83□□□□□ -0.2
VEGFA-201ENST00000230480 KCNF1Q9H3M0 494 aa13.83□□□□□ -0.2
VEGFA-201ENST00000230480 GAREM1Q9H706 876 aa13.83□□□□□ -0.2
VEGFA-201ENST00000230480 BTBD3Q9Y2F9 522 aa13.83□□□□□ -0.2
VEGFA-201ENST00000230480 COQ6Q9Y2Z9 468 aa13.83□□□□□ -0.2
VEGFA-201ENST00000230480 CEP295Q9C0D2 2601 aa13.83□□□□□ -0.2
VEGFA-201ENST00000230480 KNTC1P50748 2209 aa13.83□□□□□ -0.2
VEGFA-201ENST00000230480 CHD8Q9HCK8 2581 aa13.82□□□□□ -0.2
VEGFA-201ENST00000230480 MED19A0JLT2 244 aaPredicted RBP13.82□□□□□ -0.2
VEGFA-201ENST00000230480 PRAMEF26H0Y7S4 382 aa13.82□□□□□ -0.2
VEGFA-201ENST00000230480 TLR4O00206 839 aa13.82□□□□□ -0.2
VEGFA-201ENST00000230480 ARHGAP6O43182 974 aa13.82□□□□□ -0.2
VEGFA-201ENST00000230480 PGLSO95336 258 aa13.82□□□□□ -0.2
VEGFA-201ENST00000230480 FTCDO95954 541 aa13.82□□□□□ -0.2
VEGFA-201ENST00000230480 GIMD1P0DJR0 217 aa13.82□□□□□ -0.2
VEGFA-201ENST00000230480 PTPN7P35236 360 aa13.82□□□□□ -0.2
VEGFA-201ENST00000230480 IGFALSP35858 605 aa13.82□□□□□ -0.2
VEGFA-201ENST00000230480 HSPA9P38646 679 aaKnown RBP13.82□□□□□ -0.2
VEGFA-201ENST00000230480 RENBPP51606 427 aa13.82□□□□□ -0.2
VEGFA-201ENST00000230480 RPS21P63220 83 aaKnown RBP13.82□□□□□ -0.2
VEGFA-201ENST00000230480 SKOR1P84550 965 aa13.82□□□□□ -0.2
VEGFA-201ENST00000230480 RAD51Q06609 339 aa13.82□□□□□ -0.2
VEGFA-201ENST00000230480 AGERQ15109 404 aa13.82□□□□□ -0.2
VEGFA-201ENST00000230480 WSCD2Q2TBF2 565 aa13.82□□□□□ -0.2
VEGFA-201ENST00000230480 TFDP3Q5H9I0 405 aa13.82□□□□□ -0.2
VEGFA-201ENST00000230480 KAZNQ674X7 775 aa13.82□□□□□ -0.2
VEGFA-201ENST00000230480 KIAA1161Q6NSJ0 714 aa13.82□□□□□ -0.2
VEGFA-201ENST00000230480 LIPIQ6XZB0 460 aa13.82□□□□□ -0.2
VEGFA-201ENST00000230480 KIAA1328Q86T90 577 aa13.82□□□□□ -0.2
VEGFA-201ENST00000230480 BAHD1Q8TBE0 780 aaPredicted RBP13.82□□□□□ -0.2
VEGFA-201ENST00000230480 MCCC1Q96RQ3 725 aaPredicted RBP13.82□□□□□ -0.2
VEGFA-201ENST00000230480 TRIB3Q96RU7 358 aa13.82□□□□□ -0.2
VEGFA-201ENST00000230480 WRAP53Q9BUR4 548 aaKnown RBP13.82□□□□□ -0.2
VEGFA-201ENST00000230480 DYRK4Q9NR20 520 aa13.82□□□□□ -0.2
VEGFA-201ENST00000230480 KLF15Q9UIH9 416 aa13.82□□□□□ -0.2
VEGFA-201ENST00000230480 HS3ST3A1Q9Y663 406 aa13.82□□□□□ -0.2
VEGFA-201ENST00000230480 AKAP13Q12802 2813 aa13.81□□□□□ -0.2
VEGFA-201ENST00000230480 A0A1B0GTQ1 180 aa13.81□□□□□ -0.2
VEGFA-201ENST00000230480 KCNK5O95279 499 aa13.81□□□□□ -0.2
VEGFA-201ENST00000230480 ZNF883P0CG24 379 aa13.81□□□□□ -0.2
VEGFA-201ENST00000230480 HNRNPA2B1P22626 353 aaKnown RBP13.81□□□□□ -0.2
VEGFA-201ENST00000230480 PTPN3P26045 913 aa13.81□□□□□ -0.2
VEGFA-201ENST00000230480 LIG3P49916 1009 aa13.81□□□□□ -0.2
VEGFA-201ENST00000230480 PFN3P60673 137 aa13.81□□□□□ -0.2
VEGFA-201ENST00000230480 BCL2L1Q07817 233 aa13.81□□□□□ -0.2
VEGFA-201ENST00000230480 KIF5AQ12840 1032 aa13.81□□□□□ -0.2
VEGFA-201ENST00000230480 BNIP3Q12983 259 aa13.81□□□□□ -0.2
VEGFA-201ENST00000230480 KLF1Q13351 362 aaPredicted RBP13.81□□□□□ -0.2
VEGFA-201ENST00000230480 ZNF211Q13398 564 aaPredicted RBP13.81□□□□□ -0.2
VEGFA-201ENST00000230480 ZNF235Q14590 738 aa13.81□□□□□ -0.2
VEGFA-201ENST00000230480 GRM3Q14832 879 aa13.81□□□□□ -0.2
VEGFA-201ENST00000230480 UAP1L1Q3KQV9 507 aa13.81□□□□□ -0.2
VEGFA-201ENST00000230480 SETMARQ53H47 684 aaPredicted RBP13.81□□□□□ -0.2
VEGFA-201ENST00000230480 BRAT1Q6PJG6 821 aa13.81□□□□□ -0.2
VEGFA-201ENST00000230480 DPPA4Q7L190 304 aa13.81□□□□□ -0.2
VEGFA-201ENST00000230480 TSPAN33Q86UF1 283 aa13.81□□□□□ -0.2
VEGFA-201ENST00000230480 IQCHQ86VS3 1027 aa13.81□□□□□ -0.2
VEGFA-201ENST00000230480 HAUS1Q96CS2 278 aa13.81□□□□□ -0.2
VEGFA-201ENST00000230480 EID2BQ96D98 161 aa13.81□□□□□ -0.2
VEGFA-201ENST00000230480 ZDHHC5Q9C0B5 715 aa13.81□□□□□ -0.2
VEGFA-201ENST00000230480 BRD8Q9H0E9 1235 aa13.81□□□□□ -0.2
VEGFA-201ENST00000230480 ATP13A3Q9H7F0 1226 aa13.81□□□□□ -0.2
VEGFA-201ENST00000230480 SCUBE2Q9NQ36 999 aa13.81□□□□□ -0.2
VEGFA-201ENST00000230480 AASDHPPTQ9NRN7 309 aa13.81□□□□□ -0.2
VEGFA-201ENST00000230480 B4GALT6Q9UBX8 382 aa13.81□□□□□ -0.2
VEGFA-201ENST00000230480 TPX2Q9ULW0 747 aaKnown RBP13.81□□□□□ -0.2
VEGFA-201ENST00000230480 WASF3Q9UPY6 502 aa13.81□□□□□ -0.2
VEGFA-201ENST00000230480 PCDHB9Q9Y5E1 797 aa13.81□□□□□ -0.2
VEGFA-201ENST00000230480 RAI2Q9Y5P3 530 aa13.81□□□□□ -0.2
VEGFA-201ENST00000230480 ARHGEF17Q96PE2 2063 aaPredicted RBP13.81□□□□□ -0.2
VEGFA-201ENST00000230480 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms