RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 KLHL35Q6PF15 583 aa13.31□□□□□ -0.28
COL1A1-201ENST00000225964 ALLCQ8N6M5 410 aa13.31□□□□□ -0.28
COL1A1-201ENST00000225964 ATP6V1C2Q8NEY4 427 aa13.31□□□□□ -0.28
COL1A1-201ENST00000225964 MYO19Q96H55 970 aa13.31□□□□□ -0.28
COL1A1-201ENST00000225964 GOT1P17174 413 aa13.3□□□□□ -0.28
COL1A1-201ENST00000225964 PSMD7P51665 324 aa13.3□□□□□ -0.28
COL1A1-201ENST00000225964 NOGQ13253 232 aa13.3□□□□□ -0.28
COL1A1-201ENST00000225964 MAMLD1Q13495 774 aa13.3□□□□□ -0.28
COL1A1-201ENST00000225964 SF1Q15637 639 aaKnown RBP13.3□□□□□ -0.28
COL1A1-201ENST00000225964 PTPRNQ16849 979 aa13.3□□□□□ -0.28
COL1A1-201ENST00000225964 ATP13A4Q4VNC1 1196 aa13.3□□□□□ -0.28
COL1A1-201ENST00000225964 EARS2Q5JPH6 523 aaKnown RBP13.3□□□□□ -0.28
COL1A1-201ENST00000225964 ZFP1Q6P2D0 407 aa13.3□□□□□ -0.28
COL1A1-201ENST00000225964 PPP3R2Q96LZ3 170 aa13.3□□□□□ -0.28
COL1A1-201ENST00000225964 CLCC1Q96S66 551 aa13.3□□□□□ -0.28
COL1A1-201ENST00000225964 ACAT2Q9BWD1 397 aa13.3□□□□□ -0.28
COL1A1-201ENST00000225964 ELNP15502 786 aa13.3□□□□□ -0.28
COL1A1-201ENST00000225964 ZNF143P52747 638 aaPredicted RBP13.3□□□□□ -0.28
COL1A1-201ENST00000225964 ARF5P84085 180 aa13.3□□□□□ -0.28
COL1A1-201ENST00000225964 NR1D2Q14995 579 aa13.3□□□□□ -0.28
COL1A1-201ENST00000225964 ISLR2Q6UXK2 745 aa13.3□□□□□ -0.28
COL1A1-201ENST00000225964 NYAP1Q6ZVC0 841 aa13.3□□□□□ -0.28
COL1A1-201ENST00000225964 HPS6Q86YV9 775 aa13.3□□□□□ -0.28
COL1A1-201ENST00000225964 NRDE2Q9H7Z3 1164 aa13.3□□□□□ -0.28
COL1A1-201ENST00000225964 PTPRJQ12913 1337 aa13.3□□□□□ -0.28
COL1A1-201ENST00000225964 A0A1W2PQH9 124 aa13.3□□□□□ -0.28
COL1A1-201ENST00000225964 DDX3XO00571 662 aaKnown RBP eCLIP13.3□□□□□ -0.28
COL1A1-201ENST00000225964 MAFO75444 373 aaPredicted RBP13.3□□□□□ -0.28
COL1A1-201ENST00000225964 LPOP22079 712 aaPredicted RBP13.3□□□□□ -0.28
COL1A1-201ENST00000225964 GPRIN3Q6ZVF9 776 aa13.3□□□□□ -0.28
COL1A1-201ENST00000225964 TRPV3Q8NET8 790 aa13.3□□□□□ -0.28
COL1A1-201ENST00000225964 DNAJB14Q8TBM8 379 aa13.3□□□□□ -0.28
COL1A1-201ENST00000225964 MAGEE2Q8TD90 523 aaPredicted RBP13.3□□□□□ -0.28
COL1A1-201ENST00000225964 MTMR8Q96EF0 704 aa13.3□□□□□ -0.28
COL1A1-201ENST00000225964 TMEM138Q9NPI0 162 aa13.3□□□□□ -0.28
COL1A1-201ENST00000225964 EQTNQ9NQ60 294 aa13.3□□□□□ -0.28
COL1A1-201ENST00000225964 CMTM6Q9NX76 183 aa13.3□□□□□ -0.28
COL1A1-201ENST00000225964 COMMD9Q9P000 198 aa13.3□□□□□ -0.28
COL1A1-201ENST00000225964 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.3□□□□□ -0.28
COL1A1-201ENST00000225964 RBMXL2O75526 392 aaKnown RBP13.3□□□□□ -0.28
COL1A1-201ENST00000225964 MATN4O95460 622 aa13.3□□□□□ -0.28
COL1A1-201ENST00000225964 PROCP04070 461 aa13.3□□□□□ -0.28
COL1A1-201ENST00000225964 TFEBP19484 476 aa13.3□□□□□ -0.28
COL1A1-201ENST00000225964 PHF10Q8WUB8 498 aaKnown RBP13.3□□□□□ -0.28
COL1A1-201ENST00000225964 BRINP2Q9C0B6 783 aa13.3□□□□□ -0.28
COL1A1-201ENST00000225964 NOL6Q9H6R4 1146 aaKnown RBP13.3□□□□□ -0.28
COL1A1-201ENST00000225964 HMG20AQ9NP66 347 aa13.3□□□□□ -0.28
COL1A1-201ENST00000225964 ATXN2Q99700 1313 aaKnown RBP13.3□□□□□ -0.28
COL1A1-201ENST00000225964 LIN7AO14910 233 aaPredicted RBP13.3□□□□□ -0.28
COL1A1-201ENST00000225964 TLR5O60602 858 aa13.3□□□□□ -0.28
COL1A1-201ENST00000225964 GIMD1P0DJR0 217 aa13.3□□□□□ -0.28
COL1A1-201ENST00000225964 ITGA2P17301 1181 aa13.3□□□□□ -0.28
COL1A1-201ENST00000225964 GRIA4P48058 902 aa13.3□□□□□ -0.28
COL1A1-201ENST00000225964 SULT2A1Q06520 285 aa13.3□□□□□ -0.28
COL1A1-201ENST00000225964 MAPKAPK3Q16644 382 aa13.3□□□□□ -0.28
COL1A1-201ENST00000225964 TMC3Q7Z5M5 1100 aa13.3□□□□□ -0.28
COL1A1-201ENST00000225964 FAM129CQ86XR2 697 aa13.3□□□□□ -0.28
COL1A1-201ENST00000225964 BPIFB6Q8NFQ5 453 aa13.3□□□□□ -0.28
COL1A1-201ENST00000225964 CERS2Q96G23 380 aa13.3□□□□□ -0.28
COL1A1-201ENST00000225964 IDI2Q9BXS1 227 aa13.3□□□□□ -0.28
COL1A1-201ENST00000225964 OSER1Q9NX31 292 aa13.3□□□□□ -0.28
COL1A1-201ENST00000225964 ADAM28Q9UKQ2 775 aa13.3□□□□□ -0.28
COL1A1-201ENST00000225964 MRPS7Q9Y2R9 242 aaKnown RBP13.3□□□□□ -0.28
COL1A1-201ENST00000225964 MAP2P11137 1827 aaKnown RBP13.3□□□□□ -0.28
COL1A1-201ENST00000225964 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.29□□□□□ -0.28
COL1A1-201ENST00000225964 OR10H3O60404 316 aa13.29□□□□□ -0.28
COL1A1-201ENST00000225964 OR1D2P34982 312 aa13.29□□□□□ -0.28
COL1A1-201ENST00000225964 UGT1A5P35504 534 aa13.29□□□□□ -0.28
COL1A1-201ENST00000225964 STAT5AP42229 794 aa13.29□□□□□ -0.28
COL1A1-201ENST00000225964 NDUFA5Q16718 116 aa13.29□□□□□ -0.28
COL1A1-201ENST00000225964 LSM12Q3MHD2 195 aaKnown RBP13.29□□□□□ -0.28
COL1A1-201ENST00000225964 UBE2R2Q712K3 238 aaPredicted RBP13.29□□□□□ -0.28
COL1A1-201ENST00000225964 PIGZQ86VD9 579 aa13.29□□□□□ -0.28
COL1A1-201ENST00000225964 CDYL2Q8N8U2 506 aa13.29□□□□□ -0.28
COL1A1-201ENST00000225964 MRPL45Q9BRJ2 306 aaKnown RBP13.29□□□□□ -0.28
COL1A1-201ENST00000225964 ULK1O75385 1050 aa13.29□□□□□ -0.28
COL1A1-201ENST00000225964 MTRF1O75570 445 aaKnown RBP13.29□□□□□ -0.28
COL1A1-201ENST00000225964 TCEA1P23193 301 aaKnown RBP13.29□□□□□ -0.28
COL1A1-201ENST00000225964 MYL9P24844 172 aa13.29□□□□□ -0.28
COL1A1-201ENST00000225964 DUSP4Q13115 394 aa13.29□□□□□ -0.28
COL1A1-201ENST00000225964 FBXO22Q8NEZ5 403 aa13.29□□□□□ -0.28
COL1A1-201ENST00000225964 CRISPLD1Q9H336 500 aa13.29□□□□□ -0.28
COL1A1-201ENST00000225964 CXorf56Q9H5V9 222 aa13.29□□□□□ -0.28
COL1A1-201ENST00000225964 SGK2Q9HBY8 427 aa13.29□□□□□ -0.28
COL1A1-201ENST00000225964 PCDHGC5Q9Y5F6 944 aa13.29□□□□□ -0.28
COL1A1-201ENST00000225964 PNMA8CA0A1B0GUJ8 204 aa13.29□□□□□ -0.28
COL1A1-201ENST00000225964 TCEA3O75764 348 aa13.29□□□□□ -0.28
COL1A1-201ENST00000225964 ADRB2P07550 413 aa13.29□□□□□ -0.28
COL1A1-201ENST00000225964 KELP23276 732 aa13.29□□□□□ -0.28
COL1A1-201ENST00000225964 RAB10P61026 200 aa13.29□□□□□ -0.28
COL1A1-201ENST00000225964 MRPS22P82650 360 aaKnown RBP13.29□□□□□ -0.28
COL1A1-201ENST00000225964 TAB1Q15750 504 aa13.29□□□□□ -0.28
COL1A1-201ENST00000225964 PYDC2Q56P42 97 aa13.29□□□□□ -0.28
COL1A1-201ENST00000225964 OR4L1Q8NH43 312 aa13.29□□□□□ -0.28
COL1A1-201ENST00000225964 KCTD4Q8WVF5 259 aa13.29□□□□□ -0.28
COL1A1-201ENST00000225964 METTL21AQ8WXB1 218 aa13.29□□□□□ -0.28
COL1A1-201ENST00000225964 LMLNQ96KR4 655 aa13.29□□□□□ -0.28
COL1A1-201ENST00000225964 Q96MT0 163 aa13.29□□□□□ -0.28
COL1A1-201ENST00000225964 FRMD6Q96NE9 622 aa13.29□□□□□ -0.28
COL1A1-201ENST00000225964 PAIP1Q9H074 479 aaKnown RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms