RNA–Protein interactions for RNA: ENST00000222120.7

RAB3D-201, Transcript of RAB3D, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3D, Length 4,273 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3D-201ENST00000222120 ZNF467Q7Z7K2 595 aaPredicted RBP13.67□□□□□ -0.22
RAB3D-201ENST00000222120 C14orf80Q86SX3 495 aa13.67□□□□□ -0.22
RAB3D-201ENST00000222120 DHFR2Q86XF0 187 aa13.67□□□□□ -0.22
RAB3D-201ENST00000222120 PQLC1Q8N2U9 271 aa13.67□□□□□ -0.22
RAB3D-201ENST00000222120 OR7D4Q8NG98 312 aa13.67□□□□□ -0.22
RAB3D-201ENST00000222120 RNF217Q8TC41 542 aa13.67□□□□□ -0.22
RAB3D-201ENST00000222120 ZNF483Q8TF39 744 aaPredicted RBP13.67□□□□□ -0.22
RAB3D-201ENST00000222120 DNAJC1Q96KC8 554 aaKnown RBP13.67□□□□□ -0.22
RAB3D-201ENST00000222120 MLPHQ9BV36 600 aaPredicted RBP13.67□□□□□ -0.22
RAB3D-201ENST00000222120 CRLS1Q9UJA2 301 aa13.67□□□□□ -0.22
RAB3D-201ENST00000222120 F8W810 466 aa13.66□□□□□ -0.22
RAB3D-201ENST00000222120 LYNP07948 512 aa13.66□□□□□ -0.22
RAB3D-201ENST00000222120 DHRS4L1P0CG22 281 aa13.66□□□□□ -0.22
RAB3D-201ENST00000222120 HGFP14210 728 aa13.66□□□□□ -0.22
RAB3D-201ENST00000222120 SREBF2Q12772 1141 aa13.66□□□□□ -0.22
RAB3D-201ENST00000222120 FNDC5Q8NAU1 212 aa13.66□□□□□ -0.22
RAB3D-201ENST00000222120 SYTL2Q9HCH5 934 aa13.66□□□□□ -0.22
RAB3D-201ENST00000222120 UBA2Q9UBT2 640 aaPredicted RBP13.66□□□□□ -0.22
RAB3D-201ENST00000222120 LY75O60449 1722 aa13.66□□□□□ -0.22
RAB3D-201ENST00000222120 ARHGAP10A1A4S6 786 aa13.66□□□□□ -0.22
RAB3D-201ENST00000222120 SNRPB2P08579 225 aaKnown RBP13.66□□□□□ -0.22
RAB3D-201ENST00000222120 ZNF23P17027 643 aa13.66□□□□□ -0.22
RAB3D-201ENST00000222120 SCNN1AP37088 669 aa13.66□□□□□ -0.22
RAB3D-201ENST00000222120 CLCN5P51795 746 aa13.66□□□□□ -0.22
RAB3D-201ENST00000222120 AGMOQ6ZNB7 445 aa13.66□□□□□ -0.22
RAB3D-201ENST00000222120 ARHGAP22Q7Z5H3 698 aa13.66□□□□□ -0.22
RAB3D-201ENST00000222120 MIER2Q8N344 545 aa13.66□□□□□ -0.22
RAB3D-201ENST00000222120 DDI1Q8WTU0 396 aa13.66□□□□□ -0.22
RAB3D-201ENST00000222120 KCTD13Q8WZ19 329 aa13.66□□□□□ -0.22
RAB3D-201ENST00000222120 RTKNQ9BST9 563 aa13.66□□□□□ -0.22
RAB3D-201ENST00000222120 PCDHAC1Q9H158 963 aa13.66□□□□□ -0.22
RAB3D-201ENST00000222120 TRPM5Q9NZQ8 1165 aa13.66□□□□□ -0.22
RAB3D-201ENST00000222120 NDUFAF1Q9Y375 327 aa13.66□□□□□ -0.22
RAB3D-201ENST00000222120 DCLK1O15075 740 aa13.66□□□□□ -0.22
RAB3D-201ENST00000222120 IPO13O94829 963 aaKnown RBP13.66□□□□□ -0.22
RAB3D-201ENST00000222120 RPL17P18621 184 aaKnown RBP13.66□□□□□ -0.22
RAB3D-201ENST00000222120 AKT1P31749 480 aa13.66□□□□□ -0.22
RAB3D-201ENST00000222120 DDX39BQ13838 428 aaKnown RBP13.66□□□□□ -0.22
RAB3D-201ENST00000222120 TAZQ16635 292 aa13.66□□□□□ -0.22
RAB3D-201ENST00000222120 TTC33Q6PID6 262 aaPredicted RBP13.66□□□□□ -0.22
RAB3D-201ENST00000222120 LINGO4Q6UY18 593 aa13.66□□□□□ -0.22
RAB3D-201ENST00000222120 OXSMQ9NWU1 459 aa13.66□□□□□ -0.22
RAB3D-201ENST00000222120 AP4S1Q9Y587 144 aa13.66□□□□□ -0.22
RAB3D-201ENST00000222120 GABBR2O75899 941 aa13.65□□□□□ -0.22
RAB3D-201ENST00000222120 ITGAXP20702 1163 aa13.65□□□□□ -0.22
RAB3D-201ENST00000222120 HOXD10P28358 340 aa13.65□□□□□ -0.22
RAB3D-201ENST00000222120 PRKAA2P54646 552 aa13.65□□□□□ -0.22
RAB3D-201ENST00000222120 LDLRAD1Q5T700 205 aa13.65□□□□□ -0.22
RAB3D-201ENST00000222120 SPNS2Q8IVW8 549 aa13.65□□□□□ -0.22
RAB3D-201ENST00000222120 ANKLE1Q8NAG6 615 aa13.65□□□□□ -0.22
RAB3D-201ENST00000222120 C3orf58Q8NDZ4 430 aa13.65□□□□□ -0.22
RAB3D-201ENST00000222120 ACVR1CQ8NER5 493 aa13.65□□□□□ -0.22
RAB3D-201ENST00000222120 ARNTL2Q8WYA1 636 aa13.65□□□□□ -0.22
RAB3D-201ENST00000222120 SLC25A23Q9BV35 468 aa13.65□□□□□ -0.22
RAB3D-201ENST00000222120 PCDHGC4Q9Y5F7 938 aa13.65□□□□□ -0.22
RAB3D-201ENST00000222120 CD3EAPO15446 510 aaKnown RBP13.65□□□□□ -0.22
RAB3D-201ENST00000222120 SYNCRIPO60506 623 aaKnown RBP13.65□□□□□ -0.22
RAB3D-201ENST00000222120 CNTN5O94779 1100 aa13.65□□□□□ -0.22
RAB3D-201ENST00000222120 SIX3O95343 332 aaPredicted RBP13.65□□□□□ -0.22
RAB3D-201ENST00000222120 XRCC1P18887 633 aaPredicted RBP13.65□□□□□ -0.22
RAB3D-201ENST00000222120 PSMA4P25789 261 aaKnown RBP13.65□□□□□ -0.22
RAB3D-201ENST00000222120 RECQLP46063 649 aaPredicted RBP13.65□□□□□ -0.22
RAB3D-201ENST00000222120 THOP1P52888 689 aa13.65□□□□□ -0.22
RAB3D-201ENST00000222120 PIM3Q86V86 326 aa13.65□□□□□ -0.22
RAB3D-201ENST00000222120 APLFQ8IW19 511 aaPredicted RBP13.65□□□□□ -0.22
RAB3D-201ENST00000222120 CDYL2Q8N8U2 506 aa13.65□□□□□ -0.22
RAB3D-201ENST00000222120 OR4K2Q8NGD2 314 aa13.65□□□□□ -0.22
RAB3D-201ENST00000222120 METTL6Q8TCB7 284 aa13.65□□□□□ -0.22
RAB3D-201ENST00000222120 RTP4Q96DX8 246 aa13.65□□□□□ -0.22
RAB3D-201ENST00000222120 DTNBP1Q96EV8 351 aa13.65□□□□□ -0.22
RAB3D-201ENST00000222120 SLC39A3Q9BRY0 314 aa13.65□□□□□ -0.22
RAB3D-201ENST00000222120 C17orf80Q9BSJ5 609 aa13.65□□□□□ -0.22
RAB3D-201ENST00000222120 HAUS8Q9BT25 410 aa13.65□□□□□ -0.22
RAB3D-201ENST00000222120 PLK2Q9NYY3 685 aa13.65□□□□□ -0.22
RAB3D-201ENST00000222120 WWOXQ9NZC7 414 aa13.65□□□□□ -0.22
RAB3D-201ENST00000222120 ADCY6O43306 1168 aa13.65□□□□□ -0.22
RAB3D-201ENST00000222120 MT-ND1P03886 318 aa13.65□□□□□ -0.22
RAB3D-201ENST00000222120 CTPS1P17812 591 aa13.65□□□□□ -0.22
RAB3D-201ENST00000222120 VCLP18206 1134 aa13.65□□□□□ -0.22
RAB3D-201ENST00000222120 CCL23P55773 120 aa13.65□□□□□ -0.22
RAB3D-201ENST00000222120 RGMBQ6NW40 437 aa13.65□□□□□ -0.22
RAB3D-201ENST00000222120 NAPRTQ6XQN6 538 aa13.65□□□□□ -0.22
RAB3D-201ENST00000222120 HGH1Q9BTY7 390 aa13.65□□□□□ -0.22
RAB3D-201ENST00000222120 DRC3Q9H069 523 aa13.65□□□□□ -0.22
RAB3D-201ENST00000222120 CASS4Q9NQ75 786 aa13.65□□□□□ -0.22
RAB3D-201ENST00000222120 FLRT1Q9NZU1 646 aa13.65□□□□□ -0.22
RAB3D-201ENST00000222120 COL11A2P13942 1736 aaPredicted RBP13.65□□□□□ -0.23
RAB3D-201ENST00000222120 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.64□□□□□ -0.23
RAB3D-201ENST00000222120 HDCP19113 662 aa13.64□□□□□ -0.23
RAB3D-201ENST00000222120 GSTT1P30711 240 aa13.64□□□□□ -0.23
RAB3D-201ENST00000222120 ATP5C1P36542 298 aaKnown RBP13.64□□□□□ -0.23
RAB3D-201ENST00000222120 GALNT2Q10471 571 aa13.64□□□□□ -0.23
RAB3D-201ENST00000222120 PLD1Q13393 1074 aa13.64□□□□□ -0.23
RAB3D-201ENST00000222120 PKDCCQ504Y2 493 aa13.64□□□□□ -0.23
RAB3D-201ENST00000222120 UBXN11Q5T124 520 aa13.64□□□□□ -0.23
RAB3D-201ENST00000222120 TIFABQ6ZNK6 161 aa13.64□□□□□ -0.23
RAB3D-201ENST00000222120 ZNF534Q76KX8 674 aa13.64□□□□□ -0.23
RAB3D-201ENST00000222120 HS6ST3Q8IZP7 471 aa13.64□□□□□ -0.23
RAB3D-201ENST00000222120 RTL3Q8N8U3 475 aaKnown RBP13.64□□□□□ -0.23
RAB3D-201ENST00000222120 OR13C4Q8NGS5 318 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms