RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 TTC7BQ86TV6 843 aa27.42■■□□□ 1.98
CHMP4B-201ENST00000217402 RASSF3Q86WH2 238 aa27.42■■□□□ 1.98
CHMP4B-201ENST00000217402 CAMKK1Q8N5S9 505 aa27.42■■□□□ 1.98
CHMP4B-201ENST00000217402 DTWD2Q8NBA8 298 aa27.42■■□□□ 1.98
CHMP4B-201ENST00000217402 HDAC8Q9BY41 377 aa27.42■■□□□ 1.98
CHMP4B-201ENST00000217402 SCML1Q9UN30 329 aa27.42■■□□□ 1.98
CHMP4B-201ENST00000217402 A0A1W2PQ67 120 aa27.41■■□□□ 1.98
CHMP4B-201ENST00000217402 UPK3BL1B0FP48 263 aa27.41■■□□□ 1.98
CHMP4B-201ENST00000217402 UPK3BL2E5RIL1 263 aa27.41■■□□□ 1.98
CHMP4B-201ENST00000217402 SUN1O94901 812 aa27.41■■□□□ 1.98
CHMP4B-201ENST00000217402 PAPSS2O95340 614 aaPredicted RBP27.41■■□□□ 1.98
CHMP4B-201ENST00000217402 ADRB3P13945 408 aa27.41■■□□□ 1.98
CHMP4B-201ENST00000217402 TIMP2P16035 220 aa27.41■■□□□ 1.98
CHMP4B-201ENST00000217402 MAGEA6P43360 314 aa27.41■■□□□ 1.98
CHMP4B-201ENST00000217402 ITGA8P53708 1063 aa27.41■■□□□ 1.98
CHMP4B-201ENST00000217402 PTPRRQ15256 657 aa27.41■■□□□ 1.98
CHMP4B-201ENST00000217402 TRADDQ15628 312 aa27.41■■□□□ 1.98
CHMP4B-201ENST00000217402 UGP2Q16851 508 aa27.41■■□□□ 1.98
CHMP4B-201ENST00000217402 TMEM31Q5JXX7 168 aa27.41■■□□□ 1.98
CHMP4B-201ENST00000217402 RANBP10Q6VN20 620 aa27.41■■□□□ 1.98
CHMP4B-201ENST00000217402 PCGF5Q86SE9 256 aa27.41■■□□□ 1.98
CHMP4B-201ENST00000217402 FAM124AQ86V42 546 aa27.41■■□□□ 1.98
CHMP4B-201ENST00000217402 C1orf210Q8IVY1 113 aa27.41■■□□□ 1.98
CHMP4B-201ENST00000217402 NAT8LQ8N9F0 302 aa27.41■■□□□ 1.98
CHMP4B-201ENST00000217402 HCAR2Q8TDS4 363 aa27.41■■□□□ 1.98
CHMP4B-201ENST00000217402 EBF1Q9UH73 591 aa27.41■■□□□ 1.98
CHMP4B-201ENST00000217402 EPOP01588 193 aa27.41■■□□□ 1.98
CHMP4B-201ENST00000217402 ALPIP09923 528 aa27.41■■□□□ 1.98
CHMP4B-201ENST00000217402 HLA-DPA1P20036 260 aa27.41■■□□□ 1.98
CHMP4B-201ENST00000217402 AVPR2P30518 371 aa27.41■■□□□ 1.98
CHMP4B-201ENST00000217402 ABL2P42684 1182 aa27.41■■□□□ 1.98
CHMP4B-201ENST00000217402 GRIA4P48058 902 aa27.41■■□□□ 1.98
CHMP4B-201ENST00000217402 TPMTP51580 245 aa27.41■■□□□ 1.98
CHMP4B-201ENST00000217402 RPL26P61254 145 aaKnown RBP27.41■■□□□ 1.98
CHMP4B-201ENST00000217402 POLR2LP62875 67 aaKnown RBP27.41■■□□□ 1.98
CHMP4B-201ENST00000217402 SEMG2Q02383 582 aa27.41■■□□□ 1.98
CHMP4B-201ENST00000217402 QPCTQ16769 361 aa27.41■■□□□ 1.98
CHMP4B-201ENST00000217402 PIP5KL1Q5T9C9 394 aa27.41■■□□□ 1.98
CHMP4B-201ENST00000217402 AGBL4Q5VU57 503 aa27.41■■□□□ 1.98
CHMP4B-201ENST00000217402 LINC00523Q86TU6 105 aa27.41■■□□□ 1.98
CHMP4B-201ENST00000217402 OR52K1Q8NGK4 314 aa27.41■■□□□ 1.98
CHMP4B-201ENST00000217402 EPB41L5Q9HCM4 733 aa27.41■■□□□ 1.98
CHMP4B-201ENST00000217402 PRMT8Q9NR22 394 aaPredicted RBP27.41■■□□□ 1.98
CHMP4B-201ENST00000217402 PHTF1Q9UMS5 762 aa27.41■■□□□ 1.98
CHMP4B-201ENST00000217402 RPL26L1Q9UNX3 145 aaKnown RBP27.41■■□□□ 1.98
CHMP4B-201ENST00000217402 ANKRD66B4E2M5 251 aa27.4■■□□□ 1.98
CHMP4B-201ENST00000217402 PIRTP0C851 137 aa27.4■■□□□ 1.98
CHMP4B-201ENST00000217402 C7P10643 843 aa27.4■■□□□ 1.98
CHMP4B-201ENST00000217402 ITIH2P19823 946 aa27.4■■□□□ 1.98
CHMP4B-201ENST00000217402 CALCOCO2Q13137 446 aa27.4■■□□□ 1.98
CHMP4B-201ENST00000217402 MTM1Q13496 603 aa27.4■■□□□ 1.98
CHMP4B-201ENST00000217402 DNAAF3Q8N9W5 541 aa27.4■■□□□ 1.98
CHMP4B-201ENST00000217402 SPOCK2Q92563 424 aa27.4■■□□□ 1.98
CHMP4B-201ENST00000217402 NEUROG2Q9H2A3 272 aa27.4■■□□□ 1.98
CHMP4B-201ENST00000217402 PCDH12Q9NPG4 1184 aa27.4■■□□□ 1.98
CHMP4B-201ENST00000217402 GRHL1Q9NZI5 618 aa27.4■■□□□ 1.98
CHMP4B-201ENST00000217402 ANAPC5Q9UJX4 755 aa27.4■■□□□ 1.98
CHMP4B-201ENST00000217402 ITM2BQ9Y287 266 aa27.4■■□□□ 1.98
CHMP4B-201ENST00000217402 NCKAP1Q9Y2A7 1128 aa27.4■■□□□ 1.98
CHMP4B-201ENST00000217402 FGF1P05230 155 aa27.39■■□□□ 1.98
CHMP4B-201ENST00000217402 FAM193AP78312 1265 aa27.39■■□□□ 1.98
CHMP4B-201ENST00000217402 CDK16Q00536 496 aa27.39■■□□□ 1.98
CHMP4B-201ENST00000217402 DMWDQ09019 674 aa27.39■■□□□ 1.98
CHMP4B-201ENST00000217402 DENND5AQ6IQ26 1287 aa27.39■■□□□ 1.98
CHMP4B-201ENST00000217402 HIBCHQ6NVY1 386 aaPredicted RBP27.39■■□□□ 1.98
CHMP4B-201ENST00000217402 WHRNQ9P202 907 aa27.39■■□□□ 1.98
CHMP4B-201ENST00000217402 USP36Q9P275 1121 aaKnown RBP27.39■■□□□ 1.98
CHMP4B-201ENST00000217402 NOL12Q9UGY1 213 aaKnown RBP eCLIP27.39■■□□□ 1.98
CHMP4B-201ENST00000217402 CYP8B1Q9UNU6 501 aa27.39■■□□□ 1.98
CHMP4B-201ENST00000217402 V9GYY5 206 aaPredicted RBP27.39■■□□□ 1.98
CHMP4B-201ENST00000217402 A0A0J9YYE9 177 aa27.38■■□□□ 1.97
CHMP4B-201ENST00000217402 A8MX80 341 aa27.38■■□□□ 1.97
CHMP4B-201ENST00000217402 TRBC1P01850 177 aa27.38■■□□□ 1.97
CHMP4B-201ENST00000217402 MORF4L2Q15014 288 aa27.38■■□□□ 1.97
CHMP4B-201ENST00000217402 USP30Q70CQ3 517 aa27.38■■□□□ 1.97
CHMP4B-201ENST00000217402 USP45Q70EL2 814 aa27.38■■□□□ 1.97
CHMP4B-201ENST00000217402 HOOK3Q86VS8 718 aa27.38■■□□□ 1.97
CHMP4B-201ENST00000217402 BBOF1Q8ND07 529 aa27.38■■□□□ 1.97
CHMP4B-201ENST00000217402 ITM2CQ9NQX7 267 aa27.38■■□□□ 1.97
CHMP4B-201ENST00000217402 GGT7Q9UJ14 662 aa27.38■■□□□ 1.97
CHMP4B-201ENST00000217402 TPH1P17752 444 aa27.38■■□□□ 1.97
CHMP4B-201ENST00000217402 CSTF1Q05048 431 aaKnown RBP27.38■■□□□ 1.97
CHMP4B-201ENST00000217402 SFSWAPQ12872 951 aaKnown RBP27.38■■□□□ 1.97
CHMP4B-201ENST00000217402 ERAP2Q6P179 960 aa27.38■■□□□ 1.97
CHMP4B-201ENST00000217402 ZNF534Q76KX8 674 aa27.38■■□□□ 1.97
CHMP4B-201ENST00000217402 KBTBD6Q86V97 674 aa27.38■■□□□ 1.97
CHMP4B-201ENST00000217402 NDUFAF2Q8N183 169 aa27.38■■□□□ 1.97
CHMP4B-201ENST00000217402 RLN3Q8WXF3 142 aa27.38■■□□□ 1.97
CHMP4B-201ENST00000217402 SHOC2Q9UQ13 582 aa27.38■■□□□ 1.97
CHMP4B-201ENST00000217402 AXIN1O15169 862 aa27.37■■□□□ 1.97
CHMP4B-201ENST00000217402 TP73O15350 636 aa27.37■■□□□ 1.97
CHMP4B-201ENST00000217402 SPINT1O43278 529 aa27.37■■□□□ 1.97
CHMP4B-201ENST00000217402 HNF1BP35680 557 aa27.37■■□□□ 1.97
CHMP4B-201ENST00000217402 SARNPP82979 210 aaKnown RBP27.37■■□□□ 1.97
CHMP4B-201ENST00000217402 CCDC15Q0P6D6 951 aa27.37■■□□□ 1.97
CHMP4B-201ENST00000217402 CDH17Q12864 832 aa27.37■■□□□ 1.97
CHMP4B-201ENST00000217402 MAML2Q8IZL2 1156 aaPredicted RBP27.37■■□□□ 1.97
CHMP4B-201ENST00000217402 OR14C36Q8NHC7 312 aa27.37■■□□□ 1.97
CHMP4B-201ENST00000217402 SEC14L1Q92503 715 aa27.37■■□□□ 1.97
CHMP4B-201ENST00000217402 EPC1Q9H2F5 836 aa27.37■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms