RNA–Protein interactions for RNA: ENST00000216840.10

RABGGTA-201, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RABGGTA, Length 2,088 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-201ENST00000216840 OR51F1A6NGY5 319 aa17.33■□□□□ 0.36
RABGGTA-201ENST00000216840 BUD23O43709 281 aaKnown RBP17.33■□□□□ 0.36
RABGGTA-201ENST00000216840 CSPG5O95196 566 aa17.33■□□□□ 0.36
RABGGTA-201ENST00000216840 PRLP01236 227 aa17.33■□□□□ 0.36
RABGGTA-201ENST00000216840 MYL4P12829 197 aa17.33■□□□□ 0.36
RABGGTA-201ENST00000216840 CDC25CP30307 473 aa17.33■□□□□ 0.36
RABGGTA-201ENST00000216840 BMPR1AP36894 532 aa17.33■□□□□ 0.36
RABGGTA-201ENST00000216840 CSKP41240 450 aa17.33■□□□□ 0.36
RABGGTA-201ENST00000216840 POU4F1Q01851 419 aa17.33■□□□□ 0.36
RABGGTA-201ENST00000216840 ITGA9Q13797 1035 aa17.33■□□□□ 0.36
RABGGTA-201ENST00000216840 RBM20Q5T481 1227 aaKnown RBP17.33■□□□□ 0.36
RABGGTA-201ENST00000216840 ATG14Q6ZNE5 492 aa17.33■□□□□ 0.36
RABGGTA-201ENST00000216840 TMEM151AQ8N4L1 468 aa17.33■□□□□ 0.36
RABGGTA-201ENST00000216840 PNPLA1Q8N8W4 532 aa17.33■□□□□ 0.36
RABGGTA-201ENST00000216840 CORO1BQ9BR76 489 aa17.33■□□□□ 0.36
RABGGTA-201ENST00000216840 MARCH4Q9P2E8 410 aaPredicted RBP17.33■□□□□ 0.36
RABGGTA-201ENST00000216840 LHX3Q9UBR4 397 aa17.33■□□□□ 0.36
RABGGTA-201ENST00000216840 MARCOQ9UEW3 520 aaPredicted RBP17.33■□□□□ 0.36
RABGGTA-201ENST00000216840 VPS28Q9UK41 221 aa17.33■□□□□ 0.36
RABGGTA-201ENST00000216840 RIMKLBQ9ULI2 386 aa17.33■□□□□ 0.36
RABGGTA-201ENST00000216840 RUVBL2Q9Y230 463 aaKnown RBP17.33■□□□□ 0.36
RABGGTA-201ENST00000216840 SPO11Q9Y5K1 396 aa17.33■□□□□ 0.36
RABGGTA-201ENST00000216840 CCL16O15467 120 aa17.32■□□□□ 0.36
RABGGTA-201ENST00000216840 GLUD1P00367 558 aa17.32■□□□□ 0.36
RABGGTA-201ENST00000216840 APOA4P06727 396 aa17.32■□□□□ 0.36
RABGGTA-201ENST00000216840 KITP10721 976 aa17.32■□□□□ 0.36
RABGGTA-201ENST00000216840 ARRB2P32121 409 aa17.32■□□□□ 0.36
RABGGTA-201ENST00000216840 CTNNB1P35222 781 aa17.32■□□□□ 0.36
RABGGTA-201ENST00000216840 SKIV2L2P42285 1042 aaKnown RBP17.32■□□□□ 0.36
RABGGTA-201ENST00000216840 CLCN5P51795 746 aa17.32■□□□□ 0.36
RABGGTA-201ENST00000216840 NSUN2Q08J23 767 aaKnown RBP eCLIP17.32■□□□□ 0.36
RABGGTA-201ENST00000216840 CDH18Q13634 790 aa17.32■□□□□ 0.36
RABGGTA-201ENST00000216840 SPDYAQ5MJ70 313 aa17.32■□□□□ 0.36
RABGGTA-201ENST00000216840 PLPP4Q5VZY2 271 aa17.32■□□□□ 0.36
RABGGTA-201ENST00000216840 BBS7Q8IWZ6 715 aa17.32■□□□□ 0.36
RABGGTA-201ENST00000216840 LMNTD2Q8IXW0 634 aa17.32■□□□□ 0.36
RABGGTA-201ENST00000216840 BHMTQ93088 406 aa17.32■□□□□ 0.36
RABGGTA-201ENST00000216840 SKA1Q96BD8 255 aa17.32■□□□□ 0.36
RABGGTA-201ENST00000216840 TSNARE1Q96NA8 513 aa17.32■□□□□ 0.36
RABGGTA-201ENST00000216840 SORT1Q99523 831 aa17.32■□□□□ 0.36
RABGGTA-201ENST00000216840 SUDS3Q9H7L9 328 aaPredicted RBP17.32■□□□□ 0.36
RABGGTA-201ENST00000216840 SLC40A1Q9NP59 571 aa17.32■□□□□ 0.36
RABGGTA-201ENST00000216840 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.32■□□□□ 0.36
RABGGTA-201ENST00000216840 DNMT3BQ9UBC3 853 aaKnown RBP17.32■□□□□ 0.36
RABGGTA-201ENST00000216840 VPS51Q9UID3 782 aa17.32■□□□□ 0.36
RABGGTA-201ENST00000216840 LZTS1Q9Y250 596 aa17.32■□□□□ 0.36
RABGGTA-201ENST00000216840 ZNF510Q9Y2H8 683 aa17.32■□□□□ 0.36
RABGGTA-201ENST00000216840 SH3BP1Q9Y3L3 701 aa17.32■□□□□ 0.36
RABGGTA-201ENST00000216840 BPTFQ12830 3046 aa17.32■□□□□ 0.36
RABGGTA-201ENST00000216840 DNAJC6O75061 913 aa17.32■□□□□ 0.36
RABGGTA-201ENST00000216840 RPP40O75818 363 aaKnown RBP17.32■□□□□ 0.36
RABGGTA-201ENST00000216840 UNC5CO95185 931 aa17.32■□□□□ 0.36
RABGGTA-201ENST00000216840 S1PR4O95977 384 aa17.32■□□□□ 0.36
RABGGTA-201ENST00000216840 SBK3P0C264 359 aa17.32■□□□□ 0.36
RABGGTA-201ENST00000216840 SERPINB3P29508 390 aa17.32■□□□□ 0.36
RABGGTA-201ENST00000216840 DLG1Q12959 904 aa17.32■□□□□ 0.36
RABGGTA-201ENST00000216840 INO80DQ53TQ3 878 aaPredicted RBP17.32■□□□□ 0.36
RABGGTA-201ENST00000216840 FBXW10Q5XX13 1052 aa17.32■□□□□ 0.36
RABGGTA-201ENST00000216840 CLNKQ7Z7G1 428 aa17.32■□□□□ 0.36
RABGGTA-201ENST00000216840 LDB1Q86U70 411 aaPredicted RBP17.32■□□□□ 0.36
RABGGTA-201ENST00000216840 CPXM2Q8N436 756 aa17.32■□□□□ 0.36
RABGGTA-201ENST00000216840 MRPL43Q8N983 215 aaKnown RBP17.32■□□□□ 0.36
RABGGTA-201ENST00000216840 TDRD5Q8NAT2 981 aaKnown RBP17.32■□□□□ 0.36
RABGGTA-201ENST00000216840 OR13C4Q8NGS5 318 aa17.32■□□□□ 0.36
RABGGTA-201ENST00000216840 STYXQ8WUJ0 223 aa17.32■□□□□ 0.36
RABGGTA-201ENST00000216840 RMDN1Q96DB5 314 aa17.32■□□□□ 0.36
RABGGTA-201ENST00000216840 GPR78Q96P69 363 aa17.32■□□□□ 0.36
RABGGTA-201ENST00000216840 GCNAQ96QF7 691 aa17.32■□□□□ 0.36
RABGGTA-201ENST00000216840 NDNQ99608 321 aa17.32■□□□□ 0.36
RABGGTA-201ENST00000216840 SLC46A2Q9BY10 475 aa17.32■□□□□ 0.36
RABGGTA-201ENST00000216840 ASAH2Q9NR71 780 aa17.32■□□□□ 0.36
RABGGTA-201ENST00000216840 TXLNGQ9NUQ3 528 aa17.32■□□□□ 0.36
RABGGTA-201ENST00000216840 CPSF2Q9P2I0 782 aaKnown RBP17.32■□□□□ 0.36
RABGGTA-201ENST00000216840 PCDHGC4Q9Y5F7 938 aa17.32■□□□□ 0.36
RABGGTA-201ENST00000216840 RAI2Q9Y5P3 530 aa17.32■□□□□ 0.36
RABGGTA-201ENST00000216840 A0A087X1B8 175 aa17.31■□□□□ 0.36
RABGGTA-201ENST00000216840 CCDC162PA2VCL2 907 aa17.31■□□□□ 0.36
RABGGTA-201ENST00000216840 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.31■□□□□ 0.36
RABGGTA-201ENST00000216840 TLL1O43897 1013 aa17.31■□□□□ 0.36
RABGGTA-201ENST00000216840 GOT2P00505 430 aaKnown RBP17.31■□□□□ 0.36
RABGGTA-201ENST00000216840 PDHA1P08559 390 aa17.31■□□□□ 0.36
RABGGTA-201ENST00000216840 EN2P19622 333 aaPredicted RBP17.31■□□□□ 0.36
RABGGTA-201ENST00000216840 ABCE1P61221 599 aaKnown RBP17.31■□□□□ 0.36
RABGGTA-201ENST00000216840 PSRC1Q6PGN9 363 aaPredicted RBP17.31■□□□□ 0.36
RABGGTA-201ENST00000216840 NCEH1Q6PIU2 408 aa17.31■□□□□ 0.36
RABGGTA-201ENST00000216840 ZYG11AQ6WRX3 759 aa17.31■□□□□ 0.36
RABGGTA-201ENST00000216840 ASRGL1Q7L266 308 aa17.31■□□□□ 0.36
RABGGTA-201ENST00000216840 MFN1Q8IWA4 741 aa17.31■□□□□ 0.36
RABGGTA-201ENST00000216840 RDH11Q8TC12 318 aa17.31■□□□□ 0.36
RABGGTA-201ENST00000216840 DDI1Q8WTU0 396 aa17.31■□□□□ 0.36
RABGGTA-201ENST00000216840 NXNL1Q96CM4 212 aa17.31■□□□□ 0.36
RABGGTA-201ENST00000216840 OLFM1Q99784 485 aa17.31■□□□□ 0.36
RABGGTA-201ENST00000216840 HCFC1R1Q9NWW0 138 aa17.31■□□□□ 0.36
RABGGTA-201ENST00000216840 MID2Q9UJV3 735 aa17.31■□□□□ 0.36
RABGGTA-201ENST00000216840 DNAJC16Q9Y2G8 782 aa17.31■□□□□ 0.36
RABGGTA-201ENST00000216840 CFAP73A6NFT4 308 aa17.3■□□□□ 0.36
RABGGTA-201ENST00000216840 TK2O00142 265 aa17.3■□□□□ 0.36
RABGGTA-201ENST00000216840 LEFTY2O00292 366 aa17.3■□□□□ 0.36
RABGGTA-201ENST00000216840 RASSF9O75901 435 aa17.3■□□□□ 0.36
RABGGTA-201ENST00000216840 KLHL2O95198 593 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms