RNA–Protein interactions for RNA: ENST00000040877.1

TARBP1-201, Transcript of TAR (HIV-1) RNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARBP1, Length 5,130 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARBP1-201ENST00000040877 MTERF3Q96E29 417 aa23.27■■□□□ 1.32
TARBP1-201ENST00000040877 BRD9Q9H8M2 597 aa23.27■■□□□ 1.32
TARBP1-201ENST00000040877 ZNHIT2Q9UHR6 403 aa23.27■■□□□ 1.32
TARBP1-201ENST00000040877 MYRFQ9Y2G1 1151 aa23.27■■□□□ 1.32
TARBP1-201ENST00000040877 PEX11AO75192 247 aa23.27■■□□□ 1.32
TARBP1-201ENST00000040877 HOXB6P17509 224 aaKnown RBP23.27■■□□□ 1.32
TARBP1-201ENST00000040877 SLC5A3P53794 718 aa23.27■■□□□ 1.32
TARBP1-201ENST00000040877 COPZ1P61923 177 aa23.27■■□□□ 1.32
TARBP1-201ENST00000040877 FGD2Q7Z6J4 655 aa23.27■■□□□ 1.32
TARBP1-201ENST00000040877 CAMK1DQ8IU85 385 aa23.27■■□□□ 1.32
TARBP1-201ENST00000040877 NPAS4Q8IUM7 802 aa23.27■■□□□ 1.32
TARBP1-201ENST00000040877 RNF148Q8N7C7 305 aa23.27■■□□□ 1.32
TARBP1-201ENST00000040877 B3GNT5Q9BYG0 378 aa23.27■■□□□ 1.32
TARBP1-201ENST00000040877 C15orf41Q9Y2V0 281 aa23.27■■□□□ 1.32
TARBP1-201ENST00000040877 REXO2Q9Y3B8 237 aaKnown RBP23.27■■□□□ 1.32
TARBP1-201ENST00000040877 A0A0U1RQJ8 604 aa23.26■■□□□ 1.31
TARBP1-201ENST00000040877 AZIN1O14977 448 aa23.26■■□□□ 1.31
TARBP1-201ENST00000040877 SMPD1P17405 629 aa23.26■■□□□ 1.31
TARBP1-201ENST00000040877 MYL12AP19105 171 aa23.26■■□□□ 1.31
TARBP1-201ENST00000040877 GALNT3Q14435 633 aa23.26■■□□□ 1.31
TARBP1-201ENST00000040877 HGSNATQ68CP4 663 aa23.26■■□□□ 1.31
TARBP1-201ENST00000040877 CAMKK1Q8N5S9 505 aa23.26■■□□□ 1.31
TARBP1-201ENST00000040877 PTCD3Q96EY7 689 aaKnown RBP23.26■■□□□ 1.31
TARBP1-201ENST00000040877 EXOC2Q96KP1 924 aa23.26■■□□□ 1.31
TARBP1-201ENST00000040877 DEPDC7Q96QD5 511 aa23.26■■□□□ 1.31
TARBP1-201ENST00000040877 NTPCRQ9BSD7 190 aaKnown RBP23.26■■□□□ 1.31
TARBP1-201ENST00000040877 FGFBP2Q9BYJ0 223 aa23.26■■□□□ 1.31
TARBP1-201ENST00000040877 GMIPQ9P107 970 aa23.26■■□□□ 1.31
TARBP1-201ENST00000040877 STXBP5LQ9Y2K9 1186 aa23.26■■□□□ 1.31
TARBP1-201ENST00000040877 ATRNL1Q5VV63 1379 aa23.26■■□□□ 1.31
TARBP1-201ENST00000040877 HSMCR30P0CW71 290 aa23.26■■□□□ 1.31
TARBP1-201ENST00000040877 PSMB9P28065 219 aa23.26■■□□□ 1.31
TARBP1-201ENST00000040877 NDUFV1P49821 464 aa23.26■■□□□ 1.31
TARBP1-201ENST00000040877 GPR158Q5T848 1215 aa23.26■■□□□ 1.31
TARBP1-201ENST00000040877 CPA6Q8N4T0 437 aa23.26■■□□□ 1.31
TARBP1-201ENST00000040877 MON2Q7Z3U7 1717 aa23.26■■□□□ 1.31
TARBP1-201ENST00000040877 CST3P01034 146 aaPredicted RBP23.26■■□□□ 1.31
TARBP1-201ENST00000040877 CCNCP24863 283 aa23.26■■□□□ 1.31
TARBP1-201ENST00000040877 PPIGQ13427 754 aaKnown RBP eCLIP23.26■■□□□ 1.311e-7■■■□□ 18
TARBP1-201ENST00000040877 TCAIMQ8N3R3 496 aa23.26■■□□□ 1.31
TARBP1-201ENST00000040877 MTFMTQ96DP5 389 aaKnown RBP23.26■■□□□ 1.31
TARBP1-201ENST00000040877 VMP1Q96GC9 406 aa23.26■■□□□ 1.31
TARBP1-201ENST00000040877 AGO3Q9H9G7 860 aaKnown RBP23.26■■□□□ 1.31
TARBP1-201ENST00000040877 ANGPT4Q9Y264 503 aa23.26■■□□□ 1.31
TARBP1-201ENST00000040877 HBS1LQ9Y450 684 aaKnown RBP23.26■■□□□ 1.31
TARBP1-201ENST00000040877 GPSM3Q9Y4H4 160 aa23.26■■□□□ 1.31
TARBP1-201ENST00000040877 FAM237BA0A1B0GVD1 139 aa23.26■■□□□ 1.31
TARBP1-201ENST00000040877 UNCXA6NJT0 531 aa23.26■■□□□ 1.31
TARBP1-201ENST00000040877 GPR25O00155 361 aa23.26■■□□□ 1.31
TARBP1-201ENST00000040877 SCAMP3O14828 347 aaKnown RBP23.26■■□□□ 1.31
TARBP1-201ENST00000040877 SLC25A14O95258 325 aaPredicted RBP23.26■■□□□ 1.31
TARBP1-201ENST00000040877 FLT3P36888 993 aa23.26■■□□□ 1.31
TARBP1-201ENST00000040877 BNIP2Q12982 314 aa23.26■■□□□ 1.31
TARBP1-201ENST00000040877 CTBP1Q13363 440 aa23.26■■□□□ 1.31
TARBP1-201ENST00000040877 CDC73Q6P1J9 531 aa23.26■■□□□ 1.31
TARBP1-201ENST00000040877 MAB21L3Q8N8X9 362 aa23.26■■□□□ 1.31
TARBP1-201ENST00000040877 SPAG4Q9NPE6 437 aa23.26■■□□□ 1.31
TARBP1-201ENST00000040877 DDX3YO15523 660 aaKnown RBP23.25■■□□□ 1.31
TARBP1-201ENST00000040877 RPP40O75818 363 aaKnown RBP23.25■■□□□ 1.31
TARBP1-201ENST00000040877 COX4I1P13073 169 aa23.25■■□□□ 1.31
TARBP1-201ENST00000040877 SMIM11AP58511 58 aa23.25■■□□□ 1.31
TARBP1-201ENST00000040877 XKR6Q5GH73 641 aa23.25■■□□□ 1.31
TARBP1-201ENST00000040877 CERS6Q6ZMG9 384 aa23.25■■□□□ 1.31
TARBP1-201ENST00000040877 TRABD2AQ86V40 505 aa23.25■■□□□ 1.31
TARBP1-201ENST00000040877 RORBQ92753 470 aa23.25■■□□□ 1.31
TARBP1-201ENST00000040877 LRCH4O75427 683 aa23.25■■□□□ 1.31
TARBP1-201ENST00000040877 NFATC1O95644 943 aa23.25■■□□□ 1.31
TARBP1-201ENST00000040877 DNTTP04053 509 aa23.25■■□□□ 1.31
TARBP1-201ENST00000040877 RGS1Q08116 209 aa23.25■■□□□ 1.31
TARBP1-201ENST00000040877 NET1Q7Z628 596 aaPredicted RBP23.25■■□□□ 1.31
TARBP1-201ENST00000040877 UPF1Q92900 1129 aaKnown RBP eCLIP23.25■■□□□ 1.31
TARBP1-201ENST00000040877 LINGO1Q96FE5 620 aa23.25■■□□□ 1.31
TARBP1-201ENST00000040877 DEC1Q9P2X7 70 aa23.25■■□□□ 1.31
TARBP1-201ENST00000040877 TRIM24O15164 1050 aa23.25■■□□□ 1.31
TARBP1-201ENST00000040877 UNC5CO95185 931 aa23.25■■□□□ 1.31
TARBP1-201ENST00000040877 NUDT14O95848 222 aa23.25■■□□□ 1.31
TARBP1-201ENST00000040877 ITGA2P17301 1181 aa23.25■■□□□ 1.31
TARBP1-201ENST00000040877 PPIBP23284 216 aaKnown RBP23.25■■□□□ 1.31
TARBP1-201ENST00000040877 L1CAMP32004 1257 aa23.25■■□□□ 1.31
TARBP1-201ENST00000040877 CRATP43155 626 aa23.25■■□□□ 1.31
TARBP1-201ENST00000040877 CACNA2D1P54289 1103 aa23.25■■□□□ 1.31
TARBP1-201ENST00000040877 JAM2P57087 298 aa23.25■■□□□ 1.31
TARBP1-201ENST00000040877 LLGL2Q6P1M3 1020 aa23.25■■□□□ 1.31
TARBP1-201ENST00000040877 ZNF605Q86T29 641 aa23.25■■□□□ 1.31
TARBP1-201ENST00000040877 DQX1Q8TE96 717 aaKnown RBP23.25■■□□□ 1.31
TARBP1-201ENST00000040877 QKIQ96PU8 341 aaKnown RBP eCLIP23.25■■□□□ 1.31
TARBP1-201ENST00000040877 FSBPO95073 299 aa23.25■■□□□ 1.31
TARBP1-201ENST00000040877 NDST3O95803 873 aa23.25■■□□□ 1.31
TARBP1-201ENST00000040877 CTPS1P17812 591 aa23.25■■□□□ 1.31
TARBP1-201ENST00000040877 WARSP23381 471 aaKnown RBP23.25■■□□□ 1.31
TARBP1-201ENST00000040877 ATAD1Q8NBU5 361 aa23.25■■□□□ 1.31
TARBP1-201ENST00000040877 NELL1Q92832 810 aa23.25■■□□□ 1.31
TARBP1-201ENST00000040877 NMD3Q96D46 503 aaKnown RBP23.25■■□□□ 1.31
TARBP1-201ENST00000040877 RNFT2Q96EX2 444 aa23.25■■□□□ 1.31
TARBP1-201ENST00000040877 TBCDQ9BTW9 1192 aa23.25■■□□□ 1.31
TARBP1-201ENST00000040877 SLIT2O94813 1529 aa23.25■■□□□ 1.31
TARBP1-201ENST00000040877 PRMT5O14744 637 aaPredicted RBP23.24■■□□□ 1.31
TARBP1-201ENST00000040877 SERPINA6P08185 405 aa23.24■■□□□ 1.31
TARBP1-201ENST00000040877 IDO1P14902 403 aa23.24■■□□□ 1.31
TARBP1-201ENST00000040877 CCR3P51677 355 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms