RNA–Protein interactions for RNA: ENSMUST00000205694.1

Rnf40-202, Transcript of E3 ubiquitin-protein ligase BRE1B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf40, Length 5,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40-202ENSMUST00000205694 Mid2Q9QUS6 705 aa13.35□□□□□ -0.27
Rnf40-202ENSMUST00000205694 TfebQ9R210 475 aa13.35□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Zbed5B2RPU8 756 aa13.35□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Hnrnph3D3Z3N4 346 aaKnown RBP13.35□□□□□ -0.27
Rnf40-202ENSMUST00000205694 DbtP53395 482 aa13.35□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Gabrb2P63137 512 aa13.35□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Fam83hQ148V8 1209 aa13.35□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Magee2Q52KG3 523 aa13.35□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Mef2dQ63943 514 aa13.35□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Tmem164Q6PHN7 296 aa13.35□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Map1sQ8C052 973 aa13.35□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Trim8Q99PJ2 551 aa13.35□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Rprd1bQ9CSU0 326 aaKnown RBP13.35□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Efcab1Q9D3N2 212 aa13.35□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Hmg20aQ9DC33 346 aa13.35□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Olfr704Q9EPF6 315 aa13.35□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Sult2a7A0A1B0GRF0 313 aa13.34□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Pik3cdO35904 1043 aa13.34□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Asna1O54984 348 aa13.34□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Prdx3P20108 257 aa13.34□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Epb41l4aP52963 686 aa13.34□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Cyp2c38P56655 490 aa13.34□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Tab3Q571K4 716 aa13.34□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Xkr9Q5GH62 373 aa13.34□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Adora2aQ60613 410 aa13.34□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Fnip1Q68FD7 1165 aa13.34□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Rsbn1Q80T69 795 aa13.34□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Pgrmc2Q80UU9 217 aaKnown RBP13.34□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Gabra5Q8BHJ7 463 aa13.34□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Ythdf3Q8BYK6 585 aaKnown RBP13.34□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Nuak2Q8BZN4 639 aa13.34□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Eif3mQ99JX4 374 aa13.34□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Mrps15Q9DC71 258 aaKnown RBP13.34□□□□□ -0.27
Rnf40-202ENSMUST00000205694 SerhlQ9EPB5 311 aa13.34□□□□□ -0.27
Rnf40-202ENSMUST00000205694 MndalD0QMC3 538 aaKnown RBP13.34□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Ism2D3Z6A3 493 aa13.34□□□□□ -0.27
Rnf40-202ENSMUST00000205694 H2-M9O19442 342 aa13.34□□□□□ -0.27
Rnf40-202ENSMUST00000205694 ChgbP16014 677 aa13.34□□□□□ -0.27
Rnf40-202ENSMUST00000205694 PrkchP23298 683 aa13.34□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Ces1cP23953 554 aa13.34□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Upf3aQ3ULJ3 422 aa13.34□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Cldn11Q60771 207 aa13.34□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Kcnj11Q61743 390 aa13.34□□□□□ -0.27
Rnf40-202ENSMUST00000205694 GapdhsQ64467 440 aa13.34□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Nudcd1Q6PIP5 582 aa13.34□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Slc20a2Q80UP8 656 aa13.34□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Cgrrf1Q8BMJ7 332 aa13.34□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Fgd2Q8BY35 655 aa13.34□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Atp5f1Q9CQQ7 256 aaKnown RBP13.34□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Kctd4Q9D7X1 259 aa13.34□□□□□ -0.27
Rnf40-202ENSMUST00000205694 UqcrbQ9D855 111 aa13.34□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Htra2Q9JIY5 458 aa13.34□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Klrc2Q9WTJ9 238 aa13.34□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Bscl2Q9Z2E9 383 aa13.34□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Itga8A2ARA8 1062 aa13.34□□□□□ -0.27
Rnf40-202ENSMUST00000205694 NuggcD3YWJ0 796 aa13.34□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Plekhm3Q8BM47 761 aa13.34□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Serpina11Q8CIE0 424 aa13.34□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Zfp709Q8VC29 727 aa13.34□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Tma16Q9CR02 221 aaKnown RBP13.34□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Cmtm6Q9CZ69 183 aa13.34□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Glipr1l1Q9DAG6 236 aa13.34□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Ly6iQ9WU67 134 aa13.34□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Itgb6Q9Z0T9 787 aa13.34□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Gm281D3Z1Y0 860 aa13.34□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Rpl7aP12970 266 aaKnown RBP13.34□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Brms1lQ3U1T3 323 aa13.34□□□□□ -0.27
Rnf40-202ENSMUST00000205694 DazlQ64368 298 aaKnown RBP13.34□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Glra2Q7TNC8 452 aa13.34□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Ckap4Q8BMK4 575 aaKnown RBP13.34□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Hsdl1Q8BTX9 330 aa13.34□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Hectd2Q8CDU6 774 aa13.34□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Trps1Q925H1 1281 aa13.34□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Lima1Q9ERG0 753 aaKnown RBP13.34□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Scgb2b21A0A087WQA9 112 aa13.33□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Gm5478D3Z6R0 159 aa13.33□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Gm21293E9Q4G9 266 aa13.33□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Gm17175E9Q528 179 aa13.33□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Gm7945F6QI24 236 aa13.33□□□□□ -0.27
Rnf40-202ENSMUST00000205694 CidebO70303 219 aa13.33□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Il27raO70394 623 aa13.33□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Sema4bQ62179 823 aa13.33□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Sf1Q64213 653 aaKnown RBP13.33□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Slc9a9Q8BZ00 644 aa13.33□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Havcr2Q8VIM0 281 aa13.33□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Pcdhga6Q91XY2 932 aa13.33□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Cpt1bQ924X2 772 aa13.33□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Mov10l1Q99MV5 1187 aa13.33□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Sned1Q70E20 1403 aa13.33□□□□□ -0.27
Rnf40-202ENSMUST00000205694 Mybpc3O70468 1270 aaKnown RBP13.33□□□□□ -0.28
Rnf40-202ENSMUST00000205694 Gna13P27601 377 aa13.33□□□□□ -0.28
Rnf40-202ENSMUST00000205694 Htr5bP31387 370 aa13.33□□□□□ -0.28
Rnf40-202ENSMUST00000205694 Grin2cQ01098 1239 aa13.33□□□□□ -0.28
Rnf40-202ENSMUST00000205694 Prickle1Q3U5C7 832 aa13.33□□□□□ -0.28
Rnf40-202ENSMUST00000205694 Q3UE31 404 aa13.33□□□□□ -0.28
Rnf40-202ENSMUST00000205694 Tars2Q3UQ84 723 aaKnown RBP13.33□□□□□ -0.28
Rnf40-202ENSMUST00000205694 Sema5bQ60519 1093 aa13.33□□□□□ -0.28
Rnf40-202ENSMUST00000205694 Aldh3b1Q80VQ0 468 aa13.33□□□□□ -0.28
Rnf40-202ENSMUST00000205694 Smad3Q8BUN5 425 aa13.33□□□□□ -0.28
Rnf40-202ENSMUST00000205694 Nlrp10Q8CCN1 673 aa13.33□□□□□ -0.28
Retrieved 100 of 22,080 RNA–protein pairs in 82.4 ms