RNA–Protein interactions for RNA: ENSMUST00000196220.4

Pdlim5-208, Transcript of PDZ and LIM domain protein 5, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pdlim5, Length 1,725 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5-208ENSMUST00000196220 Rad51ap2G3UW63 976 aa13.43□□□□□ -0.26
Pdlim5-208ENSMUST00000196220 Rgs2O08849 211 aa13.43□□□□□ -0.26
Pdlim5-208ENSMUST00000196220 Cd4P06332 457 aa13.43□□□□□ -0.26
Pdlim5-208ENSMUST00000196220 SrgnP13609 152 aa13.43□□□□□ -0.26
Pdlim5-208ENSMUST00000196220 SbplQ3TUY3 232 aa13.43□□□□□ -0.26
Pdlim5-208ENSMUST00000196220 Q3UK37 420 aa13.43□□□□□ -0.26
Pdlim5-208ENSMUST00000196220 Gucy2fQ5SDA5 1108 aa13.43□□□□□ -0.26
Pdlim5-208ENSMUST00000196220 Grik1Q60934 836 aa13.43□□□□□ -0.26
Pdlim5-208ENSMUST00000196220 Itih3Q61704 889 aa13.43□□□□□ -0.26
Pdlim5-208ENSMUST00000196220 AtminQ6P9S1 818 aa13.43□□□□□ -0.26
Pdlim5-208ENSMUST00000196220 Ints7Q7TQK1 966 aaKnown RBP13.43□□□□□ -0.26
Pdlim5-208ENSMUST00000196220 Gpr142Q7TQN9 365 aa13.43□□□□□ -0.26
Pdlim5-208ENSMUST00000196220 Rxfp4Q7TQP4 414 aa13.43□□□□□ -0.26
Pdlim5-208ENSMUST00000196220 Sel1l3Q80TS8 1137 aa13.43□□□□□ -0.26
Pdlim5-208ENSMUST00000196220 Zfp719Q8BIV1 735 aa13.43□□□□□ -0.26
Pdlim5-208ENSMUST00000196220 Rd3Q8BRE0 195 aa13.43□□□□□ -0.26
Pdlim5-208ENSMUST00000196220 Wwp1Q8BZZ3 918 aa13.43□□□□□ -0.26
Pdlim5-208ENSMUST00000196220 Arhgap12Q8C0D4 838 aa13.43□□□□□ -0.26
Pdlim5-208ENSMUST00000196220 Parp9Q8CAS9 866 aa13.43□□□□□ -0.26
Pdlim5-208ENSMUST00000196220 Glis1Q8K1M4 789 aa13.43□□□□□ -0.26
Pdlim5-208ENSMUST00000196220 Olfr589Q8VGV8 317 aa13.43□□□□□ -0.26
Pdlim5-208ENSMUST00000196220 Nrif1Q923B3 828 aa13.43□□□□□ -0.26
Pdlim5-208ENSMUST00000196220 Txndc12Q9CQU0 170 aa13.43□□□□□ -0.26
Pdlim5-208ENSMUST00000196220 Rrp15Q9CYX7 281 aaKnown RBP13.43□□□□□ -0.26
Pdlim5-208ENSMUST00000196220 Q9D937 123 aaKnown RBP13.43□□□□□ -0.26
Pdlim5-208ENSMUST00000196220 Mkrn2Q9ERV1 416 aaKnown RBP13.43□□□□□ -0.26
Pdlim5-208ENSMUST00000196220 Speer3W4VSP1 261 aa13.43□□□□□ -0.26
Pdlim5-208ENSMUST00000196220 Igkv17-121A0A0G2JFA8 117 aa13.42□□□□□ -0.26
Pdlim5-208ENSMUST00000196220 Map7d3A2AEY4 876 aa13.42□□□□□ -0.26
Pdlim5-208ENSMUST00000196220 Zmynd12A2BGJ5 363 aa13.42□□□□□ -0.26
Pdlim5-208ENSMUST00000196220 Spin2dB1B0R2 236 aa13.42□□□□□ -0.26
Pdlim5-208ENSMUST00000196220 Mtx3D3YTP3 312 aa13.42□□□□□ -0.26
Pdlim5-208ENSMUST00000196220 Gm5930D3Z257 264 aa13.42□□□□□ -0.26
Pdlim5-208ENSMUST00000196220 Olfr596F8VQ26 312 aa13.42□□□□□ -0.26
Pdlim5-208ENSMUST00000196220 Galnt1O08912 559 aaKnown RBP13.42□□□□□ -0.26
Pdlim5-208ENSMUST00000196220 Cd151O35566 253 aa13.42□□□□□ -0.26
Pdlim5-208ENSMUST00000196220 Axin1O35625 863 aa13.42□□□□□ -0.26
Pdlim5-208ENSMUST00000196220 Ldb2O55203 373 aa13.42□□□□□ -0.26
Pdlim5-208ENSMUST00000196220 Gna12P27600 379 aa13.42□□□□□ -0.26
Pdlim5-208ENSMUST00000196220 Gsta3P30115 221 aa13.42□□□□□ -0.26
Pdlim5-208ENSMUST00000196220 CenpcP49452 906 aaKnown RBP13.42□□□□□ -0.26
Pdlim5-208ENSMUST00000196220 Stmn2P55821 179 aa13.42□□□□□ -0.26
Pdlim5-208ENSMUST00000196220 Rps3P62908 243 aaKnown RBP13.42□□□□□ -0.26
Pdlim5-208ENSMUST00000196220 Neurog1P70660 244 aa13.42□□□□□ -0.26
Pdlim5-208ENSMUST00000196220 AurkaP97477 395 aa13.42□□□□□ -0.26
Pdlim5-208ENSMUST00000196220 Arhgap17Q3UIA2 846 aa13.42□□□□□ -0.26
Pdlim5-208ENSMUST00000196220 Fam91a1Q3UVG3 837 aa13.42□□□□□ -0.26
Pdlim5-208ENSMUST00000196220 Brsk1Q5RJI5 778 aa13.42□□□□□ -0.26
Pdlim5-208ENSMUST00000196220 Arnt2Q61324 712 aa13.42□□□□□ -0.26
Pdlim5-208ENSMUST00000196220 Dlx3Q64205 287 aa13.42□□□□□ -0.26
Pdlim5-208ENSMUST00000196220 Vwa2Q70UZ7 791 aa13.42□□□□□ -0.26
Pdlim5-208ENSMUST00000196220 Clec4b1Q7TS58 209 aa13.42□□□□□ -0.26
Pdlim5-208ENSMUST00000196220 Pcmtd2Q8BHD8 359 aa13.42□□□□□ -0.26
Pdlim5-208ENSMUST00000196220 Ptk7Q8BKG3 1062 aa13.42□□□□□ -0.26
Pdlim5-208ENSMUST00000196220 Ccdc184Q8BMK5 191 aa13.42□□□□□ -0.26
Pdlim5-208ENSMUST00000196220 Tmem74Q8BQU7 305 aa13.42□□□□□ -0.26
Pdlim5-208ENSMUST00000196220 Tusc3Q8BTV1 347 aa13.42□□□□□ -0.26
Pdlim5-208ENSMUST00000196220 Mettl3Q8C3P7 580 aa13.42□□□□□ -0.26
Pdlim5-208ENSMUST00000196220 Trip10Q8CJ53 603 aa13.42□□□□□ -0.26
Pdlim5-208ENSMUST00000196220 Sh3kbp1Q8R550 709 aaKnown RBP13.42□□□□□ -0.26
Pdlim5-208ENSMUST00000196220 Exd2Q8VEG4 650 aaKnown RBP13.42□□□□□ -0.26
Pdlim5-208ENSMUST00000196220 Necab2Q91ZP9 389 aa13.42□□□□□ -0.26
Pdlim5-208ENSMUST00000196220 GmprQ9DCZ1 345 aa13.42□□□□□ -0.26
Pdlim5-208ENSMUST00000196220 Gpr45Q9EQQ4 373 aa13.42□□□□□ -0.26
Pdlim5-208ENSMUST00000196220 Cngb3Q9JJZ9 694 aa13.42□□□□□ -0.26
Pdlim5-208ENSMUST00000196220 Mpp6Q9JLB0 553 aa13.42□□□□□ -0.26
Pdlim5-208ENSMUST00000196220 Cldn3Q9Z0G9 219 aa13.42□□□□□ -0.26
Pdlim5-208ENSMUST00000196220 HephQ9Z0Z4 1157 aa13.42□□□□□ -0.26
Pdlim5-208ENSMUST00000196220 Htatip2Q9Z2G9 242 aa13.42□□□□□ -0.26
Pdlim5-208ENSMUST00000196220 FscbA1EGX6 1074 aa13.42□□□□□ -0.26
Pdlim5-208ENSMUST00000196220 Gm14401A2ARV7 303 aa13.42□□□□□ -0.26
Pdlim5-208ENSMUST00000196220 Gm8257E9Q8R3 264 aa13.42□□□□□ -0.26
Pdlim5-208ENSMUST00000196220 Ap3d1O54774 1199 aa13.42□□□□□ -0.26
Pdlim5-208ENSMUST00000196220 Pknox1O70477 436 aa13.42□□□□□ -0.26
Pdlim5-208ENSMUST00000196220 LdhcP00342 332 aa13.42□□□□□ -0.26
Pdlim5-208ENSMUST00000196220 JundP15066 341 aa13.42□□□□□ -0.26
Pdlim5-208ENSMUST00000196220 Htr7P32304 448 aa13.42□□□□□ -0.26
Pdlim5-208ENSMUST00000196220 CkbQ04447 381 aa13.42□□□□□ -0.26
Pdlim5-208ENSMUST00000196220 Grb10Q60760 621 aa13.42□□□□□ -0.26
Pdlim5-208ENSMUST00000196220 Gata6Q61169 589 aa13.42□□□□□ -0.26
Pdlim5-208ENSMUST00000196220 Cpa4Q6P8K8 420 aa13.42□□□□□ -0.26
Pdlim5-208ENSMUST00000196220 Ssxb3Q6XAS4 170 aa13.42□□□□□ -0.26
Pdlim5-208ENSMUST00000196220 Cpa1Q7TPZ8 419 aa13.42□□□□□ -0.26
Pdlim5-208ENSMUST00000196220 PimregQ8BFY7 231 aa13.42□□□□□ -0.26
Pdlim5-208ENSMUST00000196220 Gpr21Q8BX79 349 aa13.42□□□□□ -0.26
Pdlim5-208ENSMUST00000196220 Q8CDN1 933 aa13.42□□□□□ -0.26
Pdlim5-208ENSMUST00000196220 Defb19Q8K3I8 83 aa13.42□□□□□ -0.26
Pdlim5-208ENSMUST00000196220 Atg10Q8R1P4 215 aa13.42□□□□□ -0.26
Pdlim5-208ENSMUST00000196220 Tspan33Q8R3S2 283 aa13.42□□□□□ -0.26
Pdlim5-208ENSMUST00000196220 Arpc2Q9CVB6 300 aa13.42□□□□□ -0.26
Pdlim5-208ENSMUST00000196220 Alg14Q9D081 217 aa13.42□□□□□ -0.26
Pdlim5-208ENSMUST00000196220 Efhc2Q9D485 750 aa13.42□□□□□ -0.26
Pdlim5-208ENSMUST00000196220 Lima1Q9ERG0 753 aaKnown RBP13.42□□□□□ -0.26
Pdlim5-208ENSMUST00000196220 Rabgef1Q9JM13 491 aa13.42□□□□□ -0.26
Pdlim5-208ENSMUST00000196220 Apobec2Q9WV35 224 aa13.42□□□□□ -0.26
Pdlim5-208ENSMUST00000196220 Gm20431E9PY39 371 aa13.41□□□□□ -0.26
Pdlim5-208ENSMUST00000196220 Dthd1E9PZX1 795 aa13.41□□□□□ -0.26
Pdlim5-208ENSMUST00000196220 Igf2bp1O88477 577 aaKnown RBP13.41□□□□□ -0.26
Pdlim5-208ENSMUST00000196220 Gabrr2P56476 465 aa13.41□□□□□ -0.26
Pdlim5-208ENSMUST00000196220 Lim2P56563 173 aa13.41□□□□□ -0.26
Retrieved 100 of 22,080 RNA–protein pairs in 33.1 ms