RNA–Protein interactions for RNA: ENSMUST00000076313.12

Prpf40a-201, Transcript of Pre-mRNA-processing factor 40 homolog A, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Prpf40a, Length 7,374 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40a-201ENSMUST00000076313 Spink5Q148R4 1017 aa9.42□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 Gpr65Q61038 337 aa9.42□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 Syt15Q8C6N3 418 aa9.42□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 Slc25a19Q9DAM5 318 aa9.42□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 Trim39Q9ESN2 488 aa9.42□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 Myom1Q62234 1667 aaKnown RBP9.42□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 MttpO08601 894 aa9.42□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 Azin1O35484 448 aa9.42□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 Cyp2b19O55071 492 aa9.42□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 Chst3O88199 472 aa9.42□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 RapsnP12672 412 aa9.42□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 Lrrc8bQ5DU41 803 aa9.42□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 Msantd2Q6NZR2 559 aa9.42□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 Cdc14bQ6PFY9 485 aa9.42□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 Znf473Q8BI67 892 aa9.42□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 Gk5Q8BX05 534 aa9.42□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 Slitrk6Q8C110 840 aa9.42□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 Gspt1Q8R050 636 aaKnown RBP9.42□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 Micu1Q8VCX5 477 aa9.42□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 DhddsQ99KU1 333 aa9.42□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 Wdsub1Q9D0I6 474 aa9.42□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 Lrrc34Q9DAM1 415 aa9.42□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 Nif3l1Q9EQ80 376 aa9.42□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 Gm14401A2ARV7 303 aa9.41□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 EnpepP16406 945 aa9.41□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 Fdxacb1Q3UY23 622 aa9.41□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 Phactr4Q501J7 694 aa9.41□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 Olfr213Q7TS32 327 aa9.41□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 Trnau1apQ80VC6 287 aaKnown RBP9.41□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 Vac14Q80WQ2 782 aa9.41□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 Mup21Q80YX8 181 aa9.41□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 Atp6v1g3Q8BMC1 118 aa9.41□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 Tbc1d14Q8CGA2 694 aa9.41□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 Hist1h2aaQ8CGP4 129 aa9.41□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 Slc9a8Q8R4D1 576 aa9.41□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 Golm1Q91XA2 393 aa9.41□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 LiasQ99M04 373 aa9.41□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 KelQ9EQF2 713 aa9.41□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 S1pr4Q9Z0L1 386 aa9.41□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 Xrn1P97789 1719 aaKnown RBP9.41□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 Mrgpra2aA0A0R4J1Z0 331 aa9.41□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 Gm21973F6WEZ7 68 aa9.41□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 Dcdc2bF7BCK0 340 aa9.41□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 Wnt10bP48614 389 aa9.41□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 Cyp2c38P56655 490 aa9.41□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 Mfsd14aP70187 490 aa9.41□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 Med22Q62276 200 aa9.41□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 Rapgefl1Q68EF8 662 aa9.41□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 Olfr813Q7TRH5 310 aa9.41□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 Sytl5Q80T23 753 aa9.41□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 Tbx10Q810F8 385 aa9.41□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 Commd2Q8BXC6 199 aa9.41□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 RybpQ8CCI5 228 aa9.41□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 Epn2Q8CHU3 595 aa9.41□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 Msh4Q99MT2 958 aa9.41□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 Ampd2Q9DBT5 798 aa9.41□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 Ercc2O08811 760 aaKnown RBP9.41□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 Slc2a2P14246 523 aa9.41□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 Elk4P41158 430 aa9.41□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 CidecP56198 239 aa9.41□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 AcadsQ07417 412 aaKnown RBP9.41□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 Fscn1Q61553 493 aa9.41□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 Dnajc1Q61712 552 aaKnown RBP9.41□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 Evi2bQ8VD58 444 aa9.41□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 Ndufs2Q91WD5 463 aa9.41□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 Exosc4Q921I9 245 aaKnown RBP9.41□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 PaicsQ9DCL9 425 aa9.41□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 Olfr706Q9EPF8 316 aa9.41□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 Htra1Q9R118 480 aa9.41□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 Mical3Q8CJ19 1993 aa9.41□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 Gm13078A2AGW8 474 aa9.41□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 Gm17555F6U8B9 371 aa9.41□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 Psd4Q8BLR5 1005 aa9.41□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 Tnfaip8l1Q8K288 186 aa9.41□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 Slc35a5Q921R7 437 aa9.41□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 Tomm20lQ9D4V6 152 aa9.41□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 Mxra8Q9DBV4 442 aa9.41□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 Stap1Q9JM90 297 aaKnown RBP9.41□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 Msl3Q9WVG9 525 aa9.41□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 Casz1Q9CWL2 1761 aa9.41□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 Dok6Q2MHE5 331 aa9.41□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 Trafd1Q3UDK1 580 aa9.41□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 Ankrd13bQ5F259 626 aa9.41□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 Vmn2r26Q6TAC4 855 aa9.41□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 Pgrmc2Q80UU9 217 aaKnown RBP9.41□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 Klhl42Q8BFQ9 493 aa9.41□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 Smco1Q8CEZ1 214 aa9.41□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 Rfwd3Q8CIK8 774 aa9.41□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 B3galt6Q91Z92 325 aa9.41□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 Ak5Q920P5 562 aa9.41□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 Ints11Q9CWS4 600 aa9.41□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 Cmtm6Q9CZ69 183 aa9.41□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 Igdcc4Q9EQS9 1252 aa9.41□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 Nusap1Q9ERH4 427 aaKnown RBP9.41□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 SpastQ9QYY8 614 aa9.41□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 Vmn1r3A2AMT7 306 aa9.4□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 Tgfb2P27090 414 aa9.4□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 Ephb3P54754 993 aaKnown RBP9.4□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 Trim63Q38HM4 350 aa9.4□□□□□ -0.9
Prpf40a-201ENSMUST00000076313 Ints6Q6PCM2 883 aa9.4□□□□□ -0.9
Retrieved 100 of 22,080 RNA–protein pairs in 20.6 ms