RNA–Protein interactions for RNA: ENSMUST00000056508.11

Clcn3-202, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Clcn3, Length 5,684 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-202ENSMUST00000056508 Megf10Q6DIB5 1147 aa9□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Gsta1Q6P8Q0 223 aa9□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Slc39a13Q8BZH0 361 aa9□□□□□ -0.97
Clcn3-202ENSMUST00000056508 NeproQ8R2U2 564 aa9□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Serpinb1bQ8VHP7 382 aa9□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Pwp1Q99LL5 501 aaKnown RBP9□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Mgme1Q9CXC3 338 aa9□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Mms19Q9D071 1031 aa9□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Kcnq4Q9JK97 696 aa9□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Kcnd3Q9Z0V1 655 aa9□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Galnt4O08832 578 aa9□□□□□ -0.97
Clcn3-202ENSMUST00000056508 B3galt2O54905 422 aa9□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Nr1i2O54915 431 aa9□□□□□ -0.97
Clcn3-202ENSMUST00000056508 F9P16294 471 aa9□□□□□ -0.97
Clcn3-202ENSMUST00000056508 IapP24822 559 aa9□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Tgm3Q08189 693 aa9□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Eri2Q5BKS4 688 aa9□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Adgre1Q61549 931 aa9□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Tas2r117Q7M715 330 aa9□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Klhl12Q8BZM0 568 aa9□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Actr8Q8R2S9 624 aaKnown RBP9□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Catsper1Q91ZR5 686 aa9□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Tex13bQ99MW5 186 aa9□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Nudt8Q9CR24 210 aa9□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Arl6O88848 186 aa9□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Lin7bO88951 207 aa9□□□□□ -0.97
Clcn3-202ENSMUST00000056508 RelP15307 587 aa9□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Myf6P15375 242 aa9□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Cd72P21855 354 aa9□□□□□ -0.97
Clcn3-202ENSMUST00000056508 BidP70444 195 aa9□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Dmrtc1bQ2PMX6 267 aa9□□□□□ -0.97
Clcn3-202ENSMUST00000056508 MarcoQ60754 518 aa9□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Asic1Q6NXK8 526 aa9□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Frmd5Q6P5H6 517 aa9□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Uts2bQ765I1 113 aa9□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Lrfn2Q80TG9 788 aa9□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Caps2Q8BUG5 550 aa9□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Q8BWG4 1187 aa9□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Q8C1R3 189 aa9□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Tsen54Q8C2A2 525 aa9□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Rnf121Q8R1Z9 327 aa9□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Slf1Q8R3P9 1054 aa9□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Vmn1r42Q8VBS7 329 aa9□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Vmn1r43Q8VIC9 329 aa9□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Rgs11Q9Z2H1 443 aa9□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Qtrt2B8ZXI1 415 aa9□□□□□ -0.97
Clcn3-202ENSMUST00000056508 GmlE9PX31 176 aa9□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Oog1E9Q5G7 496 aa9□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Arg2O08691 354 aa9□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Serpini1O35684 410 aa9□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Hes2O54792 157 aa9□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Top3aO70157 1003 aa9□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Mtnd2P03893 345 aa9□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Gon7P0C8B4 98 aa9□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Rbm15Q0VBL3 962 aaKnown RBP9□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Ankdd1bQ14DN9 521 aa9□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Adad1Q5SUE7 619 aa9□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Cyp7a1Q64505 503 aa9□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Atg9bQ6EBV9 922 aa9□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Serpina3aQ6P4P1 422 aa9□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Creb3l2Q8BH52 521 aa9□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Zhx2Q8C0C0 836 aaKnown RBP9□□□□□ -0.97
Clcn3-202ENSMUST00000056508 TmieQ8K467 153 aa9□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Smyd2Q8R5A0 433 aa9□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Oas1hQ8VI97 369 aa9□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Pcdhga9Q91XX9 932 aa9□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Trpv4Q9EPK8 871 aa9□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Sppl2aQ9JJF9 523 aa9□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Gm43796A0A0J9YV32 372 aa8.99□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Vmn2r55G3UWZ4 781 aa8.99□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Hs3st1O35310 311 aa8.99□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Polr1cP52432 346 aaKnown RBP8.99□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Tmem26Q3UP23 366 aa8.99□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Bend6Q6PFX2 281 aa8.99□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Grik4Q8BMF5 956 aa8.99□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Fam234bQ8BYI8 624 aa8.99□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Lcmt2Q8BYR1 686 aa8.99□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Krtcap3Q8K177 240 aa8.99□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Adgrg1Q8K209 687 aa8.99□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Gtf2ird2Q99NI3 936 aa8.99□□□□□ -0.97
Clcn3-202ENSMUST00000056508 2610044O15Rik8A0A087WRJ1 410 aa8.99□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Gm37596A0A0A6YXL2 336 aa8.99□□□□□ -0.97
Clcn3-202ENSMUST00000056508 1700029H14RikE9PY36 240 aa8.99□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Gm20390E9PZF0 267 aa8.99□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Sult3a1O35403 293 aa8.99□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Gas2P11862 314 aaKnown RBP8.99□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Mthfd2P18155 350 aaKnown RBP8.99□□□□□ -0.97
Clcn3-202ENSMUST00000056508 ThrbP37242 461 aa8.99□□□□□ -0.97
Clcn3-202ENSMUST00000056508 CratP47934 626 aa8.99□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Tgfbrap1Q3UR70 860 aa8.99□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Vmn1r223Q5SSA0 361 aa8.99□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Scube3Q66PY1 993 aa8.99□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Klhl5Q6PFE1 708 aa8.99□□□□□ -0.97
Clcn3-202ENSMUST00000056508 EngaseQ8BX80 734 aa8.99□□□□□ -0.97
Clcn3-202ENSMUST00000056508 CcinQ8CDE2 588 aa8.99□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Rnf113a1Q8R3P8 341 aa8.99□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Golm1Q91XA2 393 aa8.99□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Utp11Q9CZJ1 253 aaKnown RBP8.99□□□□□ -0.97
Clcn3-202ENSMUST00000056508 Cdkn2aipnlQ9D211 116 aaKnown RBP8.99□□□□□ -0.97
Clcn3-202ENSMUST00000056508 HpgdsQ9JHF7 199 aa8.99□□□□□ -0.97
Retrieved 100 of 22,080 RNA–protein pairs in 14 ms