RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 Trpm6Q8CIR4 2028 aa8.77□□□□□ -1.01
Trim39-201ENSMUST00000042717 Ebf3O08791 596 aa8.77□□□□□ -1.01
Trim39-201ENSMUST00000042717 Igf2bp1O88477 577 aaKnown RBP8.77□□□□□ -1.01
Trim39-201ENSMUST00000042717 ChrngP04760 519 aa8.77□□□□□ -1.01
Trim39-201ENSMUST00000042717 Spp1P10923 294 aaKnown RBP8.77□□□□□ -1.01
Trim39-201ENSMUST00000042717 UtyP79457 1212 aa8.77□□□□□ -1.01
Trim39-201ENSMUST00000042717 SpertQ32MG2 446 aa8.77□□□□□ -1.01
Trim39-201ENSMUST00000042717 Nat9Q3UG98 241 aa8.77□□□□□ -1.01
Trim39-201ENSMUST00000042717 Ubtfl1Q3USZ2 394 aa8.77□□□□□ -1.01
Trim39-201ENSMUST00000042717 Cxcl17Q5UW37 119 aa8.77□□□□□ -1.01
Trim39-201ENSMUST00000042717 Sdf4Q61112 361 aa8.77□□□□□ -1.01
Trim39-201ENSMUST00000042717 Htr1aQ64264 421 aa8.77□□□□□ -1.01
Trim39-201ENSMUST00000042717 Olfr1505Q7TQQ2 316 aa8.77□□□□□ -1.01
Trim39-201ENSMUST00000042717 Adam29Q811Q4 763 aa8.77□□□□□ -1.01
Trim39-201ENSMUST00000042717 Cgrrf1Q8BMJ7 332 aa8.77□□□□□ -1.01
Trim39-201ENSMUST00000042717 Ccdc68Q8BVC4 333 aa8.77□□□□□ -1.01
Trim39-201ENSMUST00000042717 Lrrc3bQ8VCH9 259 aa8.77□□□□□ -1.01
Trim39-201ENSMUST00000042717 Mark1Q8VHJ5 795 aa8.77□□□□□ -1.01
Trim39-201ENSMUST00000042717 Emid1Q91VF5 444 aa8.77□□□□□ -1.01
Trim39-201ENSMUST00000042717 Hkdc1Q91W97 915 aa8.77□□□□□ -1.01
Trim39-201ENSMUST00000042717 XpotQ9CRT8 963 aa8.77□□□□□ -1.01
Trim39-201ENSMUST00000042717 Taf7lQ9D3R9 471 aa8.77□□□□□ -1.01
Trim39-201ENSMUST00000042717 Maged2Q9ER67 616 aa8.77□□□□□ -1.01
Trim39-201ENSMUST00000042717 EefsecQ9JHW4 583 aa8.77□□□□□ -1.01
Trim39-201ENSMUST00000042717 Ppp2r3cQ9JK24 453 aa8.77□□□□□ -1.01
Trim39-201ENSMUST00000042717 Akr1c12Q9JLI0 323 aa8.77□□□□□ -1.01
Trim39-201ENSMUST00000042717 NagaQ9QWR8 415 aa8.77□□□□□ -1.01
Trim39-201ENSMUST00000042717 Dnajb1Q9QYJ3 340 aaKnown RBP8.77□□□□□ -1.01
Trim39-201ENSMUST00000042717 Lactbl1S4R213 581 aa8.77□□□□□ -1.01
Trim39-201ENSMUST00000042717 Itga9B8JK39 1036 aa8.77□□□□□ -1.01
Trim39-201ENSMUST00000042717 PtproE9Q612 1226 aa8.77□□□□□ -1.01
Trim39-201ENSMUST00000042717 Arfip1G5E8V9 373 aa8.77□□□□□ -1.01
Trim39-201ENSMUST00000042717 Gp1baO35930 734 aa8.77□□□□□ -1.01
Trim39-201ENSMUST00000042717 Slc7a2P18581 657 aa8.77□□□□□ -1.01
Trim39-201ENSMUST00000042717 CblP22682 913 aa8.77□□□□□ -1.01
Trim39-201ENSMUST00000042717 Asgr1P34927 284 aa8.77□□□□□ -1.01
Trim39-201ENSMUST00000042717 Myl2P51667 166 aa8.77□□□□□ -1.01
Trim39-201ENSMUST00000042717 Ddx6P54823 483 aaKnown RBP8.77□□□□□ -1.01
Trim39-201ENSMUST00000042717 Adra1dP97714 562 aa8.77□□□□□ -1.01
Trim39-201ENSMUST00000042717 Thumpd3P97770 505 aa8.77□□□□□ -1.01
Trim39-201ENSMUST00000042717 Gm853Q3UNZ2 425 aa8.77□□□□□ -1.01
Trim39-201ENSMUST00000042717 Itga7Q61738 1179 aa8.77□□□□□ -1.01
Trim39-201ENSMUST00000042717 Rpp38Q80UU2 280 aa8.77□□□□□ -1.01
Trim39-201ENSMUST00000042717 Dyrk4Q8BI55 632 aa8.77□□□□□ -1.01
Trim39-201ENSMUST00000042717 Fmo9Q8C116 539 aa8.77□□□□□ -1.01
Trim39-201ENSMUST00000042717 TdrpQ8C5P7 182 aa8.77□□□□□ -1.01
Trim39-201ENSMUST00000042717 Atg10Q8R1P4 215 aa8.77□□□□□ -1.01
Trim39-201ENSMUST00000042717 Mrps18aQ99N85 196 aa8.77□□□□□ -1.01
Trim39-201ENSMUST00000042717 A0A286YCD0 109 aa8.76□□□□□ -1.01
Trim39-201ENSMUST00000042717 Ccdc13D3YV10 709 aa8.76□□□□□ -1.01
Trim39-201ENSMUST00000042717 Ism2D3Z6A3 493 aa8.76□□□□□ -1.01
Trim39-201ENSMUST00000042717 Ddx43D3Z6P9 646 aa8.76□□□□□ -1.01
Trim39-201ENSMUST00000042717 Taf4E9QAP7 1042 aaKnown RBP8.76□□□□□ -1.01
Trim39-201ENSMUST00000042717 Sema3aO08665 772 aa8.76□□□□□ -1.01
Trim39-201ENSMUST00000042717 P01670 111 aa8.76□□□□□ -1.01
Trim39-201ENSMUST00000042717 P01671 111 aa8.76□□□□□ -1.01
Trim39-201ENSMUST00000042717 P01672 111 aa8.76□□□□□ -1.01
Trim39-201ENSMUST00000042717 Il6raP22272 460 aa8.76□□□□□ -1.01
Trim39-201ENSMUST00000042717 Pabpc1P29341 636 aaKnown RBP8.76□□□□□ -1.01
Trim39-201ENSMUST00000042717 Man1a1P45700 655 aa8.76□□□□□ -1.01
Trim39-201ENSMUST00000042717 Ccdc127Q3TC33 260 aa8.76□□□□□ -1.01
Trim39-201ENSMUST00000042717 Taar7aQ5QD12 358 aa8.76□□□□□ -1.01
Trim39-201ENSMUST00000042717 Abcd2Q61285 741 aa8.76□□□□□ -1.01
Trim39-201ENSMUST00000042717 Tnfaip2Q61333 691 aa8.76□□□□□ -1.01
Trim39-201ENSMUST00000042717 Wnt8aQ64527 354 aa8.76□□□□□ -1.01
Trim39-201ENSMUST00000042717 Dsg1bQ7TSF1 1060 aa8.76□□□□□ -1.01
Trim39-201ENSMUST00000042717 Msantd1Q8BIL2 278 aa8.76□□□□□ -1.01
Trim39-201ENSMUST00000042717 Gpr21Q8BX79 349 aa8.76□□□□□ -1.01
Trim39-201ENSMUST00000042717 Tmem154Q8C4Q9 181 aa8.76□□□□□ -1.01
Trim39-201ENSMUST00000042717 Gpihbp1Q9D1N2 228 aa8.76□□□□□ -1.01
Trim39-201ENSMUST00000042717 Rpn2Q9DBG6 631 aaKnown RBP8.76□□□□□ -1.01
Trim39-201ENSMUST00000042717 Fhl5Q9WTX7 284 aa8.76□□□□□ -1.01
Trim39-201ENSMUST00000042717 Ap4b1Q9WV76 738 aa8.76□□□□□ -1.01
Trim39-201ENSMUST00000042717 RecqlQ9Z129 648 aa8.76□□□□□ -1.01
Trim39-201ENSMUST00000042717 H2afb2S4R1M3 115 aa8.76□□□□□ -1.01
Trim39-201ENSMUST00000042717 Olfr742A2RTP5 311 aa8.76□□□□□ -1.01
Trim39-201ENSMUST00000042717 Sh2d4bA6X942 431 aa8.76□□□□□ -1.01
Trim39-201ENSMUST00000042717 Vmn2r104E9Q2J5 860 aa8.76□□□□□ -1.01
Trim39-201ENSMUST00000042717 Il13ra1O09030 424 aa8.76□□□□□ -1.01
Trim39-201ENSMUST00000042717 RaxO35602 342 aa8.76□□□□□ -1.01
Trim39-201ENSMUST00000042717 Scamp3O35609 349 aa8.76□□□□□ -1.01
Trim39-201ENSMUST00000042717 PolP11369 1281 aa8.76□□□□□ -1.01
Trim39-201ENSMUST00000042717 Hsd17b4P51660 735 aaKnown RBP8.76□□□□□ -1.01
Trim39-201ENSMUST00000042717 VegfcP97953 415 aa8.76□□□□□ -1.01
Trim39-201ENSMUST00000042717 Bcl2a1cQ0P538 128 aa8.76□□□□□ -1.01
Trim39-201ENSMUST00000042717 Trim71Q1PSW8 855 aaKnown RBP8.76□□□□□ -1.01
Trim39-201ENSMUST00000042717 Fbxw18Q3TSA9 469 aa8.76□□□□□ -1.01
Trim39-201ENSMUST00000042717 Nab1Q61122 486 aa8.76□□□□□ -1.01
Trim39-201ENSMUST00000042717 Ssr4Q62186 172 aa8.76□□□□□ -1.01
Trim39-201ENSMUST00000042717 Ripor1Q68FE6 1223 aa8.76□□□□□ -1.01
Trim39-201ENSMUST00000042717 Zswim5Q80TC6 1188 aa8.76□□□□□ -1.01
Trim39-201ENSMUST00000042717 Exoc3l1Q8BI71 739 aa8.76□□□□□ -1.01
Trim39-201ENSMUST00000042717 CptpQ8BS40 216 aa8.76□□□□□ -1.01
Trim39-201ENSMUST00000042717 Hdac7Q8C2B3 938 aa8.76□□□□□ -1.01
Trim39-201ENSMUST00000042717 Aph1bQ8C7N7 257 aa8.76□□□□□ -1.01
Trim39-201ENSMUST00000042717 Mill2Q8HWE5 355 aa8.76□□□□□ -1.01
Trim39-201ENSMUST00000042717 PolbQ8K409 335 aa8.76□□□□□ -1.01
Trim39-201ENSMUST00000042717 OlahQ8R197 265 aa8.76□□□□□ -1.01
Trim39-201ENSMUST00000042717 Nae1Q8VBW6 534 aa8.76□□□□□ -1.01
Trim39-201ENSMUST00000042717 Dhcr24Q8VCH6 516 aaKnown RBP8.76□□□□□ -1.01
Retrieved 100 of 22,080 RNA–protein pairs in 30.9 ms