RNA–Protein interactions for RNA: ENSMUST00000040783.10

Usp40-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Usp40, Length 5,049 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40-201ENSMUST00000040783 Pgs1Q8BHF7 553 aa7.55□□□□□ -1.2
Usp40-201ENSMUST00000040783 Fbxo9Q8BK06 437 aa7.55□□□□□ -1.2
Usp40-201ENSMUST00000040783 Cpsf4Q8BQZ5 211 aaKnown RBP7.55□□□□□ -1.2
Usp40-201ENSMUST00000040783 Dennd1cQ8CFK6 786 aa7.55□□□□□ -1.2
Usp40-201ENSMUST00000040783 Prelid1Q8R107 217 aa7.55□□□□□ -1.2
Usp40-201ENSMUST00000040783 Vmn1r64Q8R2B8 320 aa7.55□□□□□ -1.2
Usp40-201ENSMUST00000040783 Stx18Q8VDS8 334 aa7.55□□□□□ -1.2
Usp40-201ENSMUST00000040783 Olfr342Q8VGK7 312 aa7.55□□□□□ -1.2
Usp40-201ENSMUST00000040783 Tbrg4Q91YM4 630 aaKnown RBP7.55□□□□□ -1.2
Usp40-201ENSMUST00000040783 Tpgs1Q99MS8 303 aa7.55□□□□□ -1.2
Usp40-201ENSMUST00000040783 Terb2Q9D494 218 aa7.55□□□□□ -1.2
Usp40-201ENSMUST00000040783 Mrpl17Q9D8P4 176 aa7.55□□□□□ -1.2
Usp40-201ENSMUST00000040783 Kcnq4Q9JK97 696 aa7.55□□□□□ -1.2
Usp40-201ENSMUST00000040783 Nfs1Q9Z1J3 459 aa7.55□□□□□ -1.2
Usp40-201ENSMUST00000040783 Vmn2r111K7N674 857 aa7.55□□□□□ -1.2
Usp40-201ENSMUST00000040783 Psma3O70435 255 aa7.55□□□□□ -1.2
Usp40-201ENSMUST00000040783 Srpk1O70551 648 aaKnown RBP7.55□□□□□ -1.2
Usp40-201ENSMUST00000040783 Ube2e3P52483 207 aa7.55□□□□□ -1.2
Usp40-201ENSMUST00000040783 Nploc4P60670 608 aa7.55□□□□□ -1.2
Usp40-201ENSMUST00000040783 Morf4l1P60762 362 aa7.55□□□□□ -1.2
Usp40-201ENSMUST00000040783 Clec12aQ504P2 267 aa7.55□□□□□ -1.2
Usp40-201ENSMUST00000040783 Rapgefl1Q68EF8 662 aa7.55□□□□□ -1.2
Usp40-201ENSMUST00000040783 Trim50Q810I2 483 aa7.55□□□□□ -1.2
Usp40-201ENSMUST00000040783 Fam78aQ8C552 283 aa7.55□□□□□ -1.2
Usp40-201ENSMUST00000040783 Fam126bQ8C729 530 aa7.55□□□□□ -1.2
Usp40-201ENSMUST00000040783 Kdm1bQ8CIG3 826 aa7.55□□□□□ -1.2
Usp40-201ENSMUST00000040783 Ogfrl1Q8VE52 464 aa7.55□□□□□ -1.2
Usp40-201ENSMUST00000040783 Map4k3Q99JP0 894 aa7.55□□□□□ -1.2
Usp40-201ENSMUST00000040783 Cstf3Q99LI7 717 aaKnown RBP7.55□□□□□ -1.2
Usp40-201ENSMUST00000040783 Efhc2Q9D485 750 aa7.55□□□□□ -1.2
Usp40-201ENSMUST00000040783 Atp6ap1Q9R1Q9 463 aa7.55□□□□□ -1.2
Usp40-201ENSMUST00000040783 Tmem115Q9WUH1 350 aa7.55□□□□□ -1.2
Usp40-201ENSMUST00000040783 Rad9aQ9Z0F6 389 aa7.55□□□□□ -1.2
Usp40-201ENSMUST00000040783 Brwd3A2AHJ4 1799 aa7.54□□□□□ -1.2
Usp40-201ENSMUST00000040783 AccsA2AIG8 502 aa7.54□□□□□ -1.2
Usp40-201ENSMUST00000040783 Gm8267E9Q207 261 aa7.54□□□□□ -1.2
Usp40-201ENSMUST00000040783 4930579F01RikE9Q3L6 325 aa7.54□□□□□ -1.2
Usp40-201ENSMUST00000040783 Scgb2b19J3QM75 112 aa7.54□□□□□ -1.2
Usp40-201ENSMUST00000040783 Vmn2r70K7N702 854 aa7.54□□□□□ -1.2
Usp40-201ENSMUST00000040783 Lgals7O54974 136 aa7.54□□□□□ -1.2
Usp40-201ENSMUST00000040783 PcnaP17918 261 aa7.54□□□□□ -1.2
Usp40-201ENSMUST00000040783 Tas2r16P59529 299 aa7.54□□□□□ -1.2
Usp40-201ENSMUST00000040783 Adam6bQ6IMH7 756 aa7.54□□□□□ -1.2
Usp40-201ENSMUST00000040783 Olfr295Q7TS08 309 aa7.54□□□□□ -1.2
Usp40-201ENSMUST00000040783 BoraQ8BS90 525 aa7.54□□□□□ -1.2
Usp40-201ENSMUST00000040783 Kctd12bQ8C7J6 292 aa7.54□□□□□ -1.2
Usp40-201ENSMUST00000040783 Evi2bQ8VD58 444 aa7.54□□□□□ -1.2
Usp40-201ENSMUST00000040783 Mark1Q8VHJ5 795 aa7.54□□□□□ -1.2
Usp40-201ENSMUST00000040783 Rab30Q923S9 203 aa7.54□□□□□ -1.2
Usp40-201ENSMUST00000040783 Lrp8Q924X6 996 aa7.54□□□□□ -1.2
Usp40-201ENSMUST00000040783 Sppl3Q9CUS9 384 aa7.54□□□□□ -1.2
Usp40-201ENSMUST00000040783 Wdsub1Q9D0I6 474 aa7.54□□□□□ -1.2
Usp40-201ENSMUST00000040783 Hddc3Q9D114 179 aa7.54□□□□□ -1.2
Usp40-201ENSMUST00000040783 Prl2b1Q9DAZ2 228 aa7.54□□□□□ -1.2
Usp40-201ENSMUST00000040783 Smg9Q9DB90 520 aa7.54□□□□□ -1.2
Usp40-201ENSMUST00000040783 KelQ9EQF2 713 aa7.54□□□□□ -1.2
Usp40-201ENSMUST00000040783 Scn4aQ9ER60 1841 aa7.54□□□□□ -1.2
Usp40-201ENSMUST00000040783 Alpk3Q924C5 1678 aa7.54□□□□□ -1.2
Usp40-201ENSMUST00000040783 Pate3B3GLJ3 98 aa7.54□□□□□ -1.2
Usp40-201ENSMUST00000040783 4930558K02RikE0CXC6 182 aa7.54□□□□□ -1.2
Usp40-201ENSMUST00000040783 Ripk2P58801 539 aa7.54□□□□□ -1.2
Usp40-201ENSMUST00000040783 AxlQ00993 888 aa7.54□□□□□ -1.2
Usp40-201ENSMUST00000040783 4930502E18RikQ14BQ3 236 aa7.54□□□□□ -1.2
Usp40-201ENSMUST00000040783 Pitpnm3Q3UHE1 974 aa7.54□□□□□ -1.2
Usp40-201ENSMUST00000040783 Q5XFZ0 217 aa7.54□□□□□ -1.2
Usp40-201ENSMUST00000040783 RbfaQ6P3B9 350 aa7.54□□□□□ -1.2
Usp40-201ENSMUST00000040783 Atl1Q8BH66 558 aa7.54□□□□□ -1.2
Usp40-201ENSMUST00000040783 Fbxl4Q8BH70 621 aa7.54□□□□□ -1.2
Usp40-201ENSMUST00000040783 Hist1h2aaQ8CGP4 129 aa7.54□□□□□ -1.2
Usp40-201ENSMUST00000040783 Tmem259Q8CIV2 574 aa7.54□□□□□ -1.2
Usp40-201ENSMUST00000040783 Cuedc1Q8R3V6 388 aa7.54□□□□□ -1.2
Usp40-201ENSMUST00000040783 AllcQ9JHX6 414 aa7.54□□□□□ -1.2
Usp40-201ENSMUST00000040783 Piwil1Q9JMB7 862 aa7.54□□□□□ -1.2
Usp40-201ENSMUST00000040783 Cyp2g1Q9WV19 494 aa7.54□□□□□ -1.2
Usp40-201ENSMUST00000040783 HnrnpdlQ9Z130 301 aaKnown RBP7.54□□□□□ -1.2
Usp40-201ENSMUST00000040783 Klhdc7aA2APT9 773 aa7.54□□□□□ -1.2
Usp40-201ENSMUST00000040783 Aldoart1A6ZI46 419 aa7.54□□□□□ -1.2
Usp40-201ENSMUST00000040783 Prkag1O54950 330 aa7.54□□□□□ -1.2
Usp40-201ENSMUST00000040783 Per3O70361 1113 aa7.54□□□□□ -1.2
Usp40-201ENSMUST00000040783 Sar1aP36536 198 aa7.54□□□□□ -1.2
Usp40-201ENSMUST00000040783 PfkmP47857 780 aaKnown RBP7.54□□□□□ -1.2
Usp40-201ENSMUST00000040783 Plk1Q07832 603 aa7.54□□□□□ -1.2
Usp40-201ENSMUST00000040783 Fcho2Q3UQN2 809 aa7.54□□□□□ -1.2
Usp40-201ENSMUST00000040783 Kctd8Q50H33 476 aa7.54□□□□□ -1.2
Usp40-201ENSMUST00000040783 Q5EBG8 199 aa7.54□□□□□ -1.2
Usp40-201ENSMUST00000040783 Zdhhc20Q5Y5T1 380 aa7.54□□□□□ -1.2
Usp40-201ENSMUST00000040783 Tssk1bQ61241 365 aa7.54□□□□□ -1.2
Usp40-201ENSMUST00000040783 Msi1Q61474 362 aaKnown RBP7.54□□□□□ -1.2
Usp40-201ENSMUST00000040783 Gga2Q6P5E6 603 aa7.54□□□□□ -1.2
Usp40-201ENSMUST00000040783 SvoplQ6PDF3 494 aa7.54□□□□□ -1.2
Usp40-201ENSMUST00000040783 Vwa2Q70UZ7 791 aa7.54□□□□□ -1.2
Usp40-201ENSMUST00000040783 Arrdc3Q7TPQ9 414 aa7.54□□□□□ -1.2
Usp40-201ENSMUST00000040783 Prl7b1Q8CGZ9 251 aa7.54□□□□□ -1.2
Usp40-201ENSMUST00000040783 Ptdss1Q99LH2 473 aaKnown RBP7.54□□□□□ -1.2
Usp40-201ENSMUST00000040783 AcadsbQ9DBL1 432 aa7.54□□□□□ -1.2
Usp40-201ENSMUST00000040783 Grm3Q9QYS2 879 aa7.54□□□□□ -1.2
Usp40-201ENSMUST00000040783 Galk1Q9R0N0 392 aa7.54□□□□□ -1.2
Usp40-201ENSMUST00000040783 Tet3Q8BG87 1668 aa7.54□□□□□ -1.2
Usp40-201ENSMUST00000040783 Hnrnph3D3Z3N4 346 aaKnown RBP7.54□□□□□ -1.2
Usp40-201ENSMUST00000040783 C87414E9PWI7 475 aa7.54□□□□□ -1.2
Retrieved 100 of 22,080 RNA–protein pairs in 44.9 ms