RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 DseQ8BLI4 958 aa10.2□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Bnc2Q8BMQ3 1127 aa10.2□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Cnpy4Q8BQ47 245 aa10.2□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Thop1Q8C1A5 687 aaKnown RBP10.2□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Robo4Q8C310 1012 aa10.2□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Cyp4a12aQ91WL5 508 aa10.2□□□□□ -0.78
Ubr1-201ENSMUST00000028728 DarsQ922B2 501 aaKnown RBP10.2□□□□□ -0.78
Ubr1-201ENSMUST00000028728 H2bfmQ9DAB5 224 aa10.2□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Aldh1a3Q9JHW9 512 aa10.2□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Vmn1r2A2AMT6 306 aa10.2□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Ttc23lA6H6E9 458 aa10.2□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Gm8444F6XS56 118 aa10.2□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Srp54P14576 504 aa10.2□□□□□ -0.78
Ubr1-201ENSMUST00000028728 GhrP16882 650 aa10.2□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Lilrb3P97484 841 aa10.2□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Zfp560Q3URI6 754 aa10.2□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Lrrc19Q8BZT5 364 aa10.2□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Atp6v1c2Q99L60 427 aa10.2□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Wdsub1Q9D0I6 474 aa10.2□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Dus2Q9D7B1 493 aa10.2□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Gm13089A2AGW7 455 aa10.19□□□□□ -0.78
Ubr1-201ENSMUST00000028728 LgmnO89017 435 aa10.19□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Mtnd2P03893 345 aa10.19□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Anxa6P14824 673 aaKnown RBP10.19□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Idh2P54071 452 aaKnown RBP10.19□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Rgs14P97492 547 aa10.19□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Cyp2j13Q3UNV4 503 aa10.19□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Rrm2bQ6PEE3 351 aa10.19□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Gm6377Q8BHV4 303 aa10.19□□□□□ -0.78
Ubr1-201ENSMUST00000028728 LnpepQ8C129 1025 aa10.19□□□□□ -0.78
Ubr1-201ENSMUST00000028728 CenpnQ9CZW2 337 aa10.19□□□□□ -0.78
Ubr1-201ENSMUST00000028728 IppP28575 584 aa10.19□□□□□ -0.78
Ubr1-201ENSMUST00000028728 DstykQ6XUX1 927 aa10.19□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Ccdc17Q8CE13 565 aa10.19□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Tada2aQ8CHV6 443 aa10.19□□□□□ -0.78
Ubr1-201ENSMUST00000028728 CarfQ8VHI4 689 aa10.19□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Uxs1Q91XL3 420 aa10.19□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Zbtb32Q9JKD9 465 aa10.19□□□□□ -0.78
Ubr1-201ENSMUST00000028728 1700031M16RikA0A087WSH0 82 aa10.19□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Dpy19l4A2AJQ3 722 aa10.19□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Gsg1l2M0QWL6 290 aa10.19□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Meis2P97367 477 aa10.19□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Rars2Q3U186 578 aa10.19□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Oog3Q3UWY1 500 aa10.19□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Kctd19Q562E2 927 aa10.19□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Fignl1Q8BPY9 683 aa10.19□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Smim5Q8BT42 78 aa10.19□□□□□ -0.78
Ubr1-201ENSMUST00000028728 LiasQ99M04 373 aa10.19□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Stk32bQ9JJX8 414 aa10.19□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Itga11P61622 1188 aa10.19□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Ctps2P70303 586 aa10.19□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Cyp4b1Q64462 511 aa10.19□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Slc44a4Q91VA1 707 aa10.19□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Ogfod2Q9CQ04 349 aa10.19□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Gm45233A0A0N4SVE0 221 aa10.19□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Nipsnap3aB1AWZ3 247 aa10.19□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Gm28048F7BCN0 99 aa10.19□□□□□ -0.78
Ubr1-201ENSMUST00000028728 TxnP10639 105 aaKnown RBP10.19□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Prdx3P20108 257 aa10.19□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Akr1clQ3UXL1 322 aa10.19□□□□□ -0.78
Ubr1-201ENSMUST00000028728 NkaplQ5SZT7 395 aa10.19□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Itm2aQ61500 263 aa10.19□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Sephs1Q8BH69 392 aa10.19□□□□□ -0.78
Ubr1-201ENSMUST00000028728 LipmQ8K2A6 422 aa10.19□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Akr1c13Q8VC28 323 aa10.19□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Cmtm6Q9CZ69 183 aa10.19□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Oxct1Q9D0K2 520 aaKnown RBP10.19□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Kcnq2Q9Z351 759 aa10.19□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Fam171a2A2A699 822 aa10.19□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Vmn2r67K7N6T2 851 aa10.19□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Dhx15O35286 795 aaKnown RBP10.19□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Mtco1P00397 514 aa10.19□□□□□ -0.78
Ubr1-201ENSMUST00000028728 LdlrP35951 862 aa10.19□□□□□ -0.78
Ubr1-201ENSMUST00000028728 ErfP70459 551 aa10.19□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Mapk10Q61831 464 aa10.19□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Ttc24Q8BYG0 334 aa10.19□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Lsm12Q9D0R8 195 aa10.19□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Stau1Q9Z108 487 aaKnown RBP10.19□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Fbxw9F8VPX2 458 aa10.18□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Gli1P47806 1111 aa10.18□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Etv6P97360 485 aa10.18□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Grm1P97772 1199 aa10.18□□□□□ -0.78
Ubr1-201ENSMUST00000028728 ZbbxQ0P5X5 716 aa10.18□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Rabl6Q5U3K5 725 aa10.18□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Trpv1Q704Y3 839 aa10.18□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Tbc1d14Q8CGA2 694 aa10.18□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Pih1d1Q9CQJ2 290 aa10.18□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Noxred1Q9D3S5 366 aa10.18□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Gm21488A0A087WR99 222 aa10.18□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Gm5415E9PXF3 478 aa10.18□□□□□ -0.78
Ubr1-201ENSMUST00000028728 S100a2J3QMC7 104 aa10.18□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Ptpn20O55082 426 aa10.18□□□□□ -0.78
Ubr1-201ENSMUST00000028728 BgnP28653 369 aa10.18□□□□□ -0.78
Ubr1-201ENSMUST00000028728 PvalbP32848 110 aa10.18□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Spink5Q148R4 1017 aa10.18□□□□□ -0.78
Ubr1-201ENSMUST00000028728 UcmaQ14BU0 138 aa10.18□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Siglec10Q80ZE3 688 aa10.18□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Tfb1mQ8JZM0 345 aaKnown RBP10.18□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Gtf2h3Q8VD76 309 aa10.18□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Olfr474Q8VFC9 310 aa10.18□□□□□ -0.78
Retrieved 100 of 22,080 RNA–protein pairs in 48.5 ms