RNA–Protein interactions for RNA: ENSMUST00000026045.13

Col17a1-201, Transcript of Collagen alpha-1(XVII) chain, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Col17a1, Length 5,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1-201ENSMUST00000026045 Cpsf4Q8BQZ5 211 aaKnown RBP16.8■□□□□ 0.28
Col17a1-201ENSMUST00000026045 Dhx32Q8BZS9 744 aa16.8■□□□□ 0.28
Col17a1-201ENSMUST00000026045 Ablim1Q8K4G5 861 aa16.8■□□□□ 0.28
Col17a1-201ENSMUST00000026045 Csde1Q91W50 798 aaKnown RBP16.8■□□□□ 0.28
Col17a1-201ENSMUST00000026045 Vangl2Q91ZD4 521 aa16.8■□□□□ 0.28
Col17a1-201ENSMUST00000026045 Syvn1Q9DBY1 612 aa16.8■□□□□ 0.28
Col17a1-201ENSMUST00000026045 Apold1E9Q0X2 246 aa16.8■□□□□ 0.28
Col17a1-201ENSMUST00000026045 4930523C07RikE9Q2T4 99 aa16.8■□□□□ 0.28
Col17a1-201ENSMUST00000026045 Spata31d1dE9Q5W2 1247 aa16.8■□□□□ 0.28
Col17a1-201ENSMUST00000026045 Il13ra2O88786 383 aa16.8■□□□□ 0.28
Col17a1-201ENSMUST00000026045 Gbx2P48031 348 aa16.8■□□□□ 0.28
Col17a1-201ENSMUST00000026045 Cyp2c39P56656 490 aa16.8■□□□□ 0.28
Col17a1-201ENSMUST00000026045 Igsf9Q05BQ1 1179 aa16.8■□□□□ 0.28
Col17a1-201ENSMUST00000026045 Cyp4f37Q3V1F1 546 aa16.8■□□□□ 0.28
Col17a1-201ENSMUST00000026045 Tgoln2Q62314 363 aa16.8■□□□□ 0.28
Col17a1-201ENSMUST00000026045 Itga2Q62469 1178 aa16.8■□□□□ 0.28
Col17a1-201ENSMUST00000026045 Cyp2r1Q6VVW9 501 aa16.8■□□□□ 0.28
Col17a1-201ENSMUST00000026045 Trpm4Q7TN37 1213 aa16.8■□□□□ 0.28
Col17a1-201ENSMUST00000026045 Snx32Q80ZJ7 404 aa16.8■□□□□ 0.28
Col17a1-201ENSMUST00000026045 Ergic2Q9CR89 377 aa16.8■□□□□ 0.28
Col17a1-201ENSMUST00000026045 Tlr4Q9QUK6 835 aa16.8■□□□□ 0.28
Col17a1-201ENSMUST00000026045 FarsbQ9WUA2 589 aaKnown RBP16.8■□□□□ 0.28
Col17a1-201ENSMUST00000026045 Gm35911A0A1D5RLS7 214 aa16.8■□□□□ 0.28
Col17a1-201ENSMUST00000026045 Zfp358E9Q8M1 571 aa16.8■□□□□ 0.28
Col17a1-201ENSMUST00000026045 Lpar1P61793 364 aa16.8■□□□□ 0.28
Col17a1-201ENSMUST00000026045 Fam83hQ148V8 1209 aa16.8■□□□□ 0.28
Col17a1-201ENSMUST00000026045 Zfp935Q14DI0 353 aa16.8■□□□□ 0.28
Col17a1-201ENSMUST00000026045 Zfp943Q6NZP4 507 aa16.8■□□□□ 0.28
Col17a1-201ENSMUST00000026045 Olfr23Q7TRX4 325 aa16.8■□□□□ 0.28
Col17a1-201ENSMUST00000026045 Robo4Q8C310 1012 aa16.8■□□□□ 0.28
Col17a1-201ENSMUST00000026045 Aqp12Q8CHJ2 290 aa16.8■□□□□ 0.28
Col17a1-201ENSMUST00000026045 Cdc73Q8JZM7 531 aa16.8■□□□□ 0.28
Col17a1-201ENSMUST00000026045 Camkk1Q8VBY2 505 aa16.8■□□□□ 0.28
Col17a1-201ENSMUST00000026045 Olfr1502Q8VG66 316 aa16.8■□□□□ 0.28
Col17a1-201ENSMUST00000026045 IqchQ9D2K4 1071 aa16.8■□□□□ 0.28
Col17a1-201ENSMUST00000026045 Haus5Q9D786 619 aa16.8■□□□□ 0.28
Col17a1-201ENSMUST00000026045 CcniQ9Z2V9 377 aa16.8■□□□□ 0.28
Col17a1-201ENSMUST00000026045 Ahnak2E9PYB0 1738 aaKnown RBP16.8■□□□□ 0.28
Col17a1-201ENSMUST00000026045 Btbd35f15A0A087WR44 498 aa16.8■□□□□ 0.28
Col17a1-201ENSMUST00000026045 Btbd35f12A0A0A0MQP3 498 aa16.8■□□□□ 0.28
Col17a1-201ENSMUST00000026045 Oas1eA0A0J9YV76 386 aa16.8■□□□□ 0.28
Col17a1-201ENSMUST00000026045 Pramef25A2ASI9 494 aa16.8■□□□□ 0.28
Col17a1-201ENSMUST00000026045 Btbd35f9A2BFZ7 498 aa16.8■□□□□ 0.28
Col17a1-201ENSMUST00000026045 Btbd35f7A2BHG6 498 aa16.8■□□□□ 0.28
Col17a1-201ENSMUST00000026045 Btbd35f19A2CG71 498 aa16.8■□□□□ 0.28
Col17a1-201ENSMUST00000026045 Btbd35f10A2CG92 498 aa16.8■□□□□ 0.28
Col17a1-201ENSMUST00000026045 Btbd35f3A2CGC2 496 aa16.8■□□□□ 0.28
Col17a1-201ENSMUST00000026045 Btbd35f13B8JKF6 498 aa16.8■□□□□ 0.28
Col17a1-201ENSMUST00000026045 Ptchd4B9EKX1 904 aa16.8■□□□□ 0.28
Col17a1-201ENSMUST00000026045 Btbd35f2J3QMS5 498 aa16.8■□□□□ 0.28
Col17a1-201ENSMUST00000026045 Btbd35f25J3QMV9 498 aa16.8■□□□□ 0.28
Col17a1-201ENSMUST00000026045 Btbd35f6J3QMW9 498 aa16.8■□□□□ 0.28
Col17a1-201ENSMUST00000026045 Btbd35f26J3QNK2 498 aa16.8■□□□□ 0.28
Col17a1-201ENSMUST00000026045 Btbd35f24J3QNQ5 498 aa16.8■□□□□ 0.28
Col17a1-201ENSMUST00000026045 Btbd35f8J3QQ50 498 aa16.8■□□□□ 0.28
Col17a1-201ENSMUST00000026045 Btbd35f17L7MU81 498 aa16.8■□□□□ 0.28
Col17a1-201ENSMUST00000026045 Btbd35f18L7MU83 498 aa16.8■□□□□ 0.28
Col17a1-201ENSMUST00000026045 MaffO54791 156 aa16.8■□□□□ 0.28
Col17a1-201ENSMUST00000026045 B3gat3P58158 335 aa16.8■□□□□ 0.28
Col17a1-201ENSMUST00000026045 Btbd35f14Q1LZI5 498 aa16.8■□□□□ 0.28
Col17a1-201ENSMUST00000026045 Fdxacb1Q3UY23 622 aa16.8■□□□□ 0.28
Col17a1-201ENSMUST00000026045 Btbd35f27Q5FWA1 498 aa16.8■□□□□ 0.28
Col17a1-201ENSMUST00000026045 Dnajc11Q5U458 559 aa16.8■□□□□ 0.28
Col17a1-201ENSMUST00000026045 Klra2Q60660 288 aa16.8■□□□□ 0.28
Col17a1-201ENSMUST00000026045 Carns1Q6ZPS2 827 aa16.8■□□□□ 0.28
Col17a1-201ENSMUST00000026045 Olfr698Q7TRN4 311 aa16.8■□□□□ 0.28
Col17a1-201ENSMUST00000026045 GMCL1P1Q99N64 498 aa16.8■□□□□ 0.28
Col17a1-201ENSMUST00000026045 Pard3bQ9CSB4 1203 aa16.8■□□□□ 0.28
Col17a1-201ENSMUST00000026045 Snx7Q9CY18 387 aa16.8■□□□□ 0.28
Col17a1-201ENSMUST00000026045 Prl8a6Q9DAY2 240 aa16.8■□□□□ 0.28
Col17a1-201ENSMUST00000026045 A0A286YDM2 672 aa16.8■□□□□ 0.28
Col17a1-201ENSMUST00000026045 Drg1P32233 367 aaKnown RBP16.8■□□□□ 0.28
Col17a1-201ENSMUST00000026045 Pla2g6P97819 807 aa16.8■□□□□ 0.28
Col17a1-201ENSMUST00000026045 Adam2Q60718 735 aa16.8■□□□□ 0.28
Col17a1-201ENSMUST00000026045 Trpv1Q704Y3 839 aa16.8■□□□□ 0.28
Col17a1-201ENSMUST00000026045 Kat8Q9D1P2 458 aa16.8■□□□□ 0.28
Col17a1-201ENSMUST00000026045 1700018B08RikQ9DA83 213 aa16.8■□□□□ 0.28
Col17a1-201ENSMUST00000026045 PolkQ9QUG2 852 aa16.8■□□□□ 0.28
Col17a1-201ENSMUST00000026045 Gria4Q9Z2W8 902 aa16.8■□□□□ 0.28
Col17a1-201ENSMUST00000026045 Arap3Q8R5G7 1538 aa16.79■□□□□ 0.28
Col17a1-201ENSMUST00000026045 Gm3476K7N6V0 257 aa16.79■□□□□ 0.28
Col17a1-201ENSMUST00000026045 Stt3aP46978 705 aa16.79■□□□□ 0.28
Col17a1-201ENSMUST00000026045 Usp43Q8BUM9 1132 aa16.79■□□□□ 0.28
Col17a1-201ENSMUST00000026045 Ogfrl1Q8VE52 464 aa16.79■□□□□ 0.28
Col17a1-201ENSMUST00000026045 Pik3cgQ9JHG7 1102 aa16.79■□□□□ 0.28
Col17a1-201ENSMUST00000026045 Slc4a11A2AJN7 862 aa16.79■□□□□ 0.28
Col17a1-201ENSMUST00000026045 Tubb1A2AQ07 451 aa16.79■□□□□ 0.28
Col17a1-201ENSMUST00000026045 FaahO08914 579 aa16.79■□□□□ 0.28
Col17a1-201ENSMUST00000026045 Chst3O88199 472 aa16.79■□□□□ 0.28
Col17a1-201ENSMUST00000026045 Mkln1O89050 735 aa16.79■□□□□ 0.28
Col17a1-201ENSMUST00000026045 Csf1rP09581 977 aa16.79■□□□□ 0.28
Col17a1-201ENSMUST00000026045 Tigd2Q0VBL1 525 aa16.79■□□□□ 0.28
Col17a1-201ENSMUST00000026045 Vps51Q3UVL4 782 aa16.79■□□□□ 0.28
Col17a1-201ENSMUST00000026045 TdrpQ8C5P7 182 aa16.79■□□□□ 0.28
Col17a1-201ENSMUST00000026045 Mamdc2Q8CG85 686 aa16.79■□□□□ 0.28
Col17a1-201ENSMUST00000026045 Dpy30Q99LT0 99 aa16.79■□□□□ 0.28
Col17a1-201ENSMUST00000026045 PompQ9CQT5 141 aa16.79■□□□□ 0.28
Col17a1-201ENSMUST00000026045 Vps35Q9EQH3 796 aaKnown RBP16.79■□□□□ 0.28
Col17a1-201ENSMUST00000026045 Gm5751A2AHC8 147 aa16.79■□□□□ 0.28
Col17a1-201ENSMUST00000026045 Btnl6A2CG22 539 aa16.79■□□□□ 0.28
Retrieved 100 of 22,080 RNA–protein pairs in 20.5 ms