RNA–Protein interactions for RNA: ENSMUST00000022225.11

Trim23-201, Transcript of E3 ubiquitin-protein ligase TRIM23, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim23, Length 3,416 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23-201ENSMUST00000022225 Gprc5dQ9JIL6 344 aa12.43□□□□□ -0.42
Trim23-201ENSMUST00000022225 Rps6ka4Q9Z2B9 773 aa12.43□□□□□ -0.42
Trim23-201ENSMUST00000022225 Gm5538W4VSP6 401 aa12.43□□□□□ -0.42
Trim23-201ENSMUST00000022225 Gm12394A2AKP6 982 aa12.43□□□□□ -0.42
Trim23-201ENSMUST00000022225 Serpinb2P12388 415 aa12.43□□□□□ -0.42
Trim23-201ENSMUST00000022225 Shcbp1lQ3TTP0 639 aa12.43□□□□□ -0.42
Trim23-201ENSMUST00000022225 Q3UJP5 209 aa12.43□□□□□ -0.42
Trim23-201ENSMUST00000022225 Best3Q6H1V1 669 aa12.43□□□□□ -0.42
Trim23-201ENSMUST00000022225 Pcdh20Q8BIZ0 952 aa12.43□□□□□ -0.42
Trim23-201ENSMUST00000022225 TpbglQ8C013 384 aa12.43□□□□□ -0.42
Trim23-201ENSMUST00000022225 Trpv3Q8K424 791 aa12.43□□□□□ -0.42
Trim23-201ENSMUST00000022225 Olfr815Q8VFU0 316 aa12.43□□□□□ -0.42
Trim23-201ENSMUST00000022225 Znf639Q99KZ6 485 aa12.43□□□□□ -0.42
Trim23-201ENSMUST00000022225 Adck1Q9D0L4 525 aa12.43□□□□□ -0.42
Trim23-201ENSMUST00000022225 Q9DAD0 168 aa12.43□□□□□ -0.42
Trim23-201ENSMUST00000022225 Nek6Q9ES70 313 aa12.43□□□□□ -0.42
Trim23-201ENSMUST00000022225 Nectin1Q9JKF6 515 aa12.43□□□□□ -0.42
Trim23-201ENSMUST00000022225 Rfc2Q9WUK4 349 aaKnown RBP12.43□□□□□ -0.42
Trim23-201ENSMUST00000022225 Slc6a21A0A1B0GSD2 748 aa12.43□□□□□ -0.42
Trim23-201ENSMUST00000022225 TriqkB2B9E1 86 aa12.43□□□□□ -0.42
Trim23-201ENSMUST00000022225 Pgbd1E9Q492 415 aa12.43□□□□□ -0.42
Trim23-201ENSMUST00000022225 Rhox2gL7MUB9 191 aa12.43□□□□□ -0.42
Trim23-201ENSMUST00000022225 Soat2O88908 525 aa12.43□□□□□ -0.42
Trim23-201ENSMUST00000022225 Gon7P0C8B4 98 aa12.43□□□□□ -0.42
Trim23-201ENSMUST00000022225 Adra2bP30545 450 aa12.43□□□□□ -0.42
Trim23-201ENSMUST00000022225 Zfp217Q3U0X6 1041 aa12.43□□□□□ -0.42
Trim23-201ENSMUST00000022225 Tgfbrap1Q3UR70 860 aa12.43□□□□□ -0.42
Trim23-201ENSMUST00000022225 Ipcef1Q5DU31 406 aa12.43□□□□□ -0.42
Trim23-201ENSMUST00000022225 Lrrc8bQ5DU41 803 aa12.43□□□□□ -0.42
Trim23-201ENSMUST00000022225 Atg4cQ811C2 458 aa12.43□□□□□ -0.42
Trim23-201ENSMUST00000022225 Fbxo28Q8BIG4 368 aa12.43□□□□□ -0.42
Trim23-201ENSMUST00000022225 Mtrf1lQ8BJU9 373 aa12.43□□□□□ -0.42
Trim23-201ENSMUST00000022225 Fastkd3Q8BSN9 661 aa12.43□□□□□ -0.42
Trim23-201ENSMUST00000022225 GaleQ8R059 347 aa12.43□□□□□ -0.42
Trim23-201ENSMUST00000022225 Mrps18aQ99N85 196 aa12.43□□□□□ -0.42
Trim23-201ENSMUST00000022225 Spo11Q9WTK8 396 aa12.43□□□□□ -0.42
Trim23-201ENSMUST00000022225 Zgrf1Q0VGT4 1863 aa12.42□□□□□ -0.42
Trim23-201ENSMUST00000022225 Vmn2r84D3YWE3 849 aa12.42□□□□□ -0.42
Trim23-201ENSMUST00000022225 Cyp4f17G3UW78 524 aa12.42□□□□□ -0.42
Trim23-201ENSMUST00000022225 Itga11P61622 1188 aa12.42□□□□□ -0.42
Trim23-201ENSMUST00000022225 Cyp2c65Q148B1 490 aa12.42□□□□□ -0.42
Trim23-201ENSMUST00000022225 Zmat1Q3V0C1 714 aa12.42□□□□□ -0.42
Trim23-201ENSMUST00000022225 Mfhas1Q3V1N1 1048 aa12.42□□□□□ -0.42
Trim23-201ENSMUST00000022225 Slc22a15Q504N2 544 aa12.42□□□□□ -0.42
Trim23-201ENSMUST00000022225 BC080695Q66JY9 481 aa12.42□□□□□ -0.42
Trim23-201ENSMUST00000022225 Adamts16Q69Z28 1222 aa12.42□□□□□ -0.42
Trim23-201ENSMUST00000022225 Pik3c3Q6PF93 887 aa12.42□□□□□ -0.42
Trim23-201ENSMUST00000022225 Slc35e2Q8C811 405 aa12.42□□□□□ -0.42
Trim23-201ENSMUST00000022225 AdprmQ99KS6 340 aa12.42□□□□□ -0.42
Trim23-201ENSMUST00000022225 Krt20Q9D312 431 aa12.42□□□□□ -0.42
Trim23-201ENSMUST00000022225 Syvn1Q9DBY1 612 aa12.42□□□□□ -0.42
Trim23-201ENSMUST00000022225 Gbp11A9YVJ5 442 aa12.42□□□□□ -0.42
Trim23-201ENSMUST00000022225 Kif28pD3YXS5 1028 aa12.42□□□□□ -0.42
Trim23-201ENSMUST00000022225 AlyrefO08583 255 aaKnown RBP12.42□□□□□ -0.42
Trim23-201ENSMUST00000022225 Bcat1P24288 386 aa12.42□□□□□ -0.42
Trim23-201ENSMUST00000022225 Alox5P48999 674 aa12.42□□□□□ -0.42
Trim23-201ENSMUST00000022225 ArsaP50428 506 aa12.42□□□□□ -0.42
Trim23-201ENSMUST00000022225 Atp5jP97450 108 aa12.42□□□□□ -0.42
Trim23-201ENSMUST00000022225 Mtf2Q02395 593 aa12.42□□□□□ -0.42
Trim23-201ENSMUST00000022225 Pecam1Q08481 727 aaKnown RBP12.42□□□□□ -0.42
Trim23-201ENSMUST00000022225 Trim40Q3UWA4 246 aa12.42□□□□□ -0.42
Trim23-201ENSMUST00000022225 Wnt8aQ64527 354 aa12.42□□□□□ -0.42
Trim23-201ENSMUST00000022225 PrcpQ7TMR0 491 aa12.42□□□□□ -0.42
Trim23-201ENSMUST00000022225 Ush1gQ80T11 461 aa12.42□□□□□ -0.42
Trim23-201ENSMUST00000022225 Mterf1aQ8CHZ9 379 aa12.42□□□□□ -0.42
Trim23-201ENSMUST00000022225 Ints10Q8K2A7 710 aaKnown RBP12.42□□□□□ -0.42
Trim23-201ENSMUST00000022225 Angptl7Q8R1Q3 337 aa12.42□□□□□ -0.42
Trim23-201ENSMUST00000022225 Depdc7Q91WS7 511 aa12.42□□□□□ -0.42
Trim23-201ENSMUST00000022225 Far1Q922J9 515 aa12.42□□□□□ -0.42
Trim23-201ENSMUST00000022225 Atg7Q9D906 698 aa12.42□□□□□ -0.42
Trim23-201ENSMUST00000022225 Hipk3Q9ERH7 1192 aa12.42□□□□□ -0.42
Trim23-201ENSMUST00000022225 Gm43796A0A0J9YV32 372 aa12.42□□□□□ -0.42
Trim23-201ENSMUST00000022225 Zmynd12A2BGJ5 363 aa12.42□□□□□ -0.42
Trim23-201ENSMUST00000022225 Asna1O54984 348 aa12.42□□□□□ -0.42
Trim23-201ENSMUST00000022225 Hcn1O88704 910 aa12.42□□□□□ -0.42
Trim23-201ENSMUST00000022225 Krt10P02535 570 aa12.42□□□□□ -0.42
Trim23-201ENSMUST00000022225 Pcsk2P21661 637 aa12.42□□□□□ -0.42
Trim23-201ENSMUST00000022225 Cd247P24161 164 aa12.42□□□□□ -0.42
Trim23-201ENSMUST00000022225 Ybx1P62960 322 aaKnown RBP12.42□□□□□ -0.42
Trim23-201ENSMUST00000022225 Oas1fQ14AZ4 364 aa12.42□□□□□ -0.42
Trim23-201ENSMUST00000022225 Tbc1d24Q3UUG6 561 aa12.42□□□□□ -0.42
Trim23-201ENSMUST00000022225 Brinp3Q499E0 766 aa12.42□□□□□ -0.42
Trim23-201ENSMUST00000022225 Slc27a5Q4LDG0 689 aa12.42□□□□□ -0.42
Trim23-201ENSMUST00000022225 Kir3dl2Q673W2 388 aa12.42□□□□□ -0.42
Trim23-201ENSMUST00000022225 Fam83eQ80XS7 481 aa12.42□□□□□ -0.42
Trim23-201ENSMUST00000022225 Prickle2Q80Y24 845 aa12.42□□□□□ -0.42
Trim23-201ENSMUST00000022225 Prpf18Q8BM39 342 aa12.42□□□□□ -0.42
Trim23-201ENSMUST00000022225 Lca5lQ8C0X0 741 aa12.42□□□□□ -0.42
Trim23-201ENSMUST00000022225 Lpin1Q91ZP3 924 aa12.42□□□□□ -0.42
Trim23-201ENSMUST00000022225 Msi2Q920Q6 346 aaKnown RBP12.42□□□□□ -0.42
Trim23-201ENSMUST00000022225 Ilf2Q9CXY6 390 aaKnown RBP12.42□□□□□ -0.42
Trim23-201ENSMUST00000022225 Dcp2Q9CYC6 422 aa12.42□□□□□ -0.42
Trim23-201ENSMUST00000022225 CenpsQ9D084 142 aa12.42□□□□□ -0.42
Trim23-201ENSMUST00000022225 Kctd4Q9D7X1 259 aa12.42□□□□□ -0.42
Trim23-201ENSMUST00000022225 Fam3aQ9D8T0 230 aa12.42□□□□□ -0.42
Trim23-201ENSMUST00000022225 Cyp4v2Q9DBW0 525 aa12.42□□□□□ -0.42
Trim23-201ENSMUST00000022225 ArntlQ9WTL8 632 aa12.42□□□□□ -0.42
Trim23-201ENSMUST00000022225 Ruvbl2Q9WTM5 463 aaKnown RBP12.42□□□□□ -0.42
Trim23-201ENSMUST00000022225 Keap1Q9Z2X8 624 aaKnown RBP12.42□□□□□ -0.42
Trim23-201ENSMUST00000022225 Gm6205E9PZS2 359 aa12.41□□□□□ -0.42
Retrieved 100 of 22,080 RNA–protein pairs in 24.1 ms