RNA–Protein interactions for RNA: ENSMUST00000022220.12

Msh3-201, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Msh3, Length 3,937 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-201ENSMUST00000022220 Zfp217Q3U0X6 1041 aa10.94□□□□□ -0.66
Msh3-201ENSMUST00000022220 Mylk4Q5SUV5 386 aa10.94□□□□□ -0.66
Msh3-201ENSMUST00000022220 9930111J21Rik1Q5SVP0 844 aa10.94□□□□□ -0.66
Msh3-201ENSMUST00000022220 Wbp4Q61048 376 aa10.94□□□□□ -0.66
Msh3-201ENSMUST00000022220 MelkQ61846 643 aa10.94□□□□□ -0.66
Msh3-201ENSMUST00000022220 Ifit3Q64345 403 aa10.94□□□□□ -0.66
Msh3-201ENSMUST00000022220 EfsQ64355 560 aa10.94□□□□□ -0.66
Msh3-201ENSMUST00000022220 Bfsp2Q6NVD9 416 aa10.94□□□□□ -0.66
Msh3-201ENSMUST00000022220 Bend6Q6PFX2 281 aa10.94□□□□□ -0.66
Msh3-201ENSMUST00000022220 Nup93Q8BJ71 819 aaKnown RBP10.94□□□□□ -0.66
Msh3-201ENSMUST00000022220 Smad3Q8BUN5 425 aa10.94□□□□□ -0.66
Msh3-201ENSMUST00000022220 Tma7Q8K003 64 aaKnown RBP10.94□□□□□ -0.66
Msh3-201ENSMUST00000022220 Gspt1Q8R050 636 aaKnown RBP10.94□□□□□ -0.66
Msh3-201ENSMUST00000022220 Slc30a5Q8R4H9 761 aa10.94□□□□□ -0.66
Msh3-201ENSMUST00000022220 Wnt9aQ8R5M2 365 aa10.94□□□□□ -0.66
Msh3-201ENSMUST00000022220 Ing3Q8VEK6 421 aa10.94□□□□□ -0.66
Msh3-201ENSMUST00000022220 Q922R1 422 aa10.94□□□□□ -0.66
Msh3-201ENSMUST00000022220 Cybrd1Q925G2 290 aa10.94□□□□□ -0.66
Msh3-201ENSMUST00000022220 Pole4Q9CQ36 118 aa10.94□□□□□ -0.66
Msh3-201ENSMUST00000022220 Arpc2Q9CVB6 300 aa10.94□□□□□ -0.66
Msh3-201ENSMUST00000022220 Cnbd2Q9D5U8 673 aa10.94□□□□□ -0.66
Msh3-201ENSMUST00000022220 Cab39lQ9DB16 337 aa10.94□□□□□ -0.66
Msh3-201ENSMUST00000022220 Epm2aQ9WUA5 330 aa10.94□□□□□ -0.66
Msh3-201ENSMUST00000022220 Irs2P81122 1321 aa10.94□□□□□ -0.66
Msh3-201ENSMUST00000022220 Zfp831A2ADM8 1628 aa10.94□□□□□ -0.66
Msh3-201ENSMUST00000022220 Gm13941A2AJ38 245 aa10.94□□□□□ -0.66
Msh3-201ENSMUST00000022220 Ttc23lA6H6E9 458 aa10.94□□□□□ -0.66
Msh3-201ENSMUST00000022220 Sema6aO35464 1031 aa10.94□□□□□ -0.66
Msh3-201ENSMUST00000022220 Pde9aO70628 534 aa10.94□□□□□ -0.66
Msh3-201ENSMUST00000022220 Aldh3a1P47739 453 aa10.94□□□□□ -0.66
Msh3-201ENSMUST00000022220 Hsd17b4P51660 735 aaKnown RBP10.94□□□□□ -0.66
Msh3-201ENSMUST00000022220 Pcbp1P60335 356 aaKnown RBP10.94□□□□□ -0.66
Msh3-201ENSMUST00000022220 Cd300lgQ1ERP8 331 aa10.94□□□□□ -0.66
Msh3-201ENSMUST00000022220 Cyp4f37Q3V1F1 546 aa10.94□□□□□ -0.66
Msh3-201ENSMUST00000022220 Rab26Q504M8 260 aa10.94□□□□□ -0.66
Msh3-201ENSMUST00000022220 Far2Q7TNT2 515 aa10.94□□□□□ -0.66
Msh3-201ENSMUST00000022220 Arhgap11aQ80Y19 987 aa10.94□□□□□ -0.66
Msh3-201ENSMUST00000022220 Cept1Q8BGS7 416 aa10.94□□□□□ -0.66
Msh3-201ENSMUST00000022220 Metap1Q8BP48 386 aaKnown RBP10.94□□□□□ -0.66
Msh3-201ENSMUST00000022220 Ccdc32Q8BS39 179 aa10.94□□□□□ -0.66
Msh3-201ENSMUST00000022220 Rsl1d1Q8BVY0 452 aaKnown RBP10.94□□□□□ -0.66
Msh3-201ENSMUST00000022220 Nsl1Q8K305 281 aa10.94□□□□□ -0.66
Msh3-201ENSMUST00000022220 Dapk2Q8VDF3 370 aa10.94□□□□□ -0.66
Msh3-201ENSMUST00000022220 Mta3Q924K8 591 aa10.94□□□□□ -0.66
Msh3-201ENSMUST00000022220 2010005H15RikQ9D8D6 97 aa10.94□□□□□ -0.66
Msh3-201ENSMUST00000022220 Pkp3Q9QY23 797 aa10.94□□□□□ -0.66
Msh3-201ENSMUST00000022220 Med20Q9R0X0 212 aa10.94□□□□□ -0.66
Msh3-201ENSMUST00000022220 Unc13cQ8K0T7 2210 aa10.94□□□□□ -0.66
Msh3-201ENSMUST00000022220 Pcdh7A0A0A6YY83 1255 aa10.93□□□□□ -0.66
Msh3-201ENSMUST00000022220 Fam155bA2BDP1 471 aa10.93□□□□□ -0.66
Msh3-201ENSMUST00000022220 Klhl4B1AZR0 717 aa10.93□□□□□ -0.66
Msh3-201ENSMUST00000022220 Slc1a6O35544 561 aa10.93□□□□□ -0.66
Msh3-201ENSMUST00000022220 Ptp4a2O70274 167 aa10.93□□□□□ -0.66
Msh3-201ENSMUST00000022220 S100a9P31725 113 aa10.93□□□□□ -0.66
Msh3-201ENSMUST00000022220 Plcl1Q3USB7 1096 aa10.93□□□□□ -0.66
Msh3-201ENSMUST00000022220 ScinQ60604 715 aa10.93□□□□□ -0.66
Msh3-201ENSMUST00000022220 PterQ60866 349 aa10.93□□□□□ -0.66
Msh3-201ENSMUST00000022220 RgnQ64374 299 aa10.93□□□□□ -0.66
Msh3-201ENSMUST00000022220 Snx16Q8C080 344 aa10.93□□□□□ -0.66
Msh3-201ENSMUST00000022220 ItchQ8C863 864 aa10.93□□□□□ -0.66
Msh3-201ENSMUST00000022220 Slfn5Q8CBA2 884 aa10.93□□□□□ -0.66
Msh3-201ENSMUST00000022220 Lrrc66Q8K0B3 872 aa10.93□□□□□ -0.66
Msh3-201ENSMUST00000022220 Pdia5Q921X9 517 aa10.93□□□□□ -0.66
Msh3-201ENSMUST00000022220 Exoc2Q9D4H1 924 aa10.93□□□□□ -0.66
Msh3-201ENSMUST00000022220 Rhobtb1Q9DAK3 695 aa10.93□□□□□ -0.66
Msh3-201ENSMUST00000022220 IgtpQ9DCE9 423 aa10.93□□□□□ -0.66
Msh3-201ENSMUST00000022220 Mpp5Q9JLB2 675 aa10.93□□□□□ -0.66
Msh3-201ENSMUST00000022220 Aqp5Q9WTY4 265 aa10.93□□□□□ -0.66
Msh3-201ENSMUST00000022220 Elf4Q9Z2U4 655 aa10.93□□□□□ -0.66
Msh3-201ENSMUST00000022220 Cacna1cQ01815 2139 aa10.93□□□□□ -0.66
Msh3-201ENSMUST00000022220 4930469K13RikA0A286YDB2 92 aa10.93□□□□□ -0.66
Msh3-201ENSMUST00000022220 Gm12800B1AUV4 484 aa10.93□□□□□ -0.66
Msh3-201ENSMUST00000022220 Zfp651E9PZ11 729 aa10.93□□□□□ -0.66
Msh3-201ENSMUST00000022220 Gm3336J3QMQ6 198 aa10.93□□□□□ -0.66
Msh3-201ENSMUST00000022220 Gm12794L7MTS5 483 aa10.93□□□□□ -0.66
Msh3-201ENSMUST00000022220 Aff2O55112 1272 aa10.93□□□□□ -0.66
Msh3-201ENSMUST00000022220 Ccdc153P0C7Q1 202 aa10.93□□□□□ -0.66
Msh3-201ENSMUST00000022220 Lamp2P17047 415 aa10.93□□□□□ -0.66
Msh3-201ENSMUST00000022220 Wnt3aP27467 352 aa10.93□□□□□ -0.66
Msh3-201ENSMUST00000022220 Adra1dP97714 562 aa10.93□□□□□ -0.66
Msh3-201ENSMUST00000022220 Tnfaip8l3Q3TBL6 204 aa10.93□□□□□ -0.66
Msh3-201ENSMUST00000022220 Fam169aQ5XG69 665 aa10.93□□□□□ -0.66
Msh3-201ENSMUST00000022220 Trim17Q7TPM3 477 aa10.93□□□□□ -0.66
Msh3-201ENSMUST00000022220 NaprtQ8CC86 538 aa10.93□□□□□ -0.66
Msh3-201ENSMUST00000022220 Kctd2Q8CEZ0 266 aa10.93□□□□□ -0.66
Msh3-201ENSMUST00000022220 Dennd1cQ8CFK6 786 aa10.93□□□□□ -0.66
Msh3-201ENSMUST00000022220 CherpQ8CGZ0 936 aaKnown RBP10.93□□□□□ -0.66
Msh3-201ENSMUST00000022220 Reep3Q99KK1 254 aa10.93□□□□□ -0.66
Msh3-201ENSMUST00000022220 Dnajb4Q9D832 337 aa10.93□□□□□ -0.66
Msh3-201ENSMUST00000022220 Serpinb9bQ9DAV6 377 aa10.93□□□□□ -0.66
Msh3-201ENSMUST00000022220 Pgam1Q9DBJ1 254 aa10.93□□□□□ -0.66
Msh3-201ENSMUST00000022220 Rgs1Q9JL25 209 aa10.93□□□□□ -0.66
Msh3-201ENSMUST00000022220 Cntn6Q9JMB8 1028 aa10.93□□□□□ -0.66
Msh3-201ENSMUST00000022220 Dnaja2Q9QYJ0 412 aa10.93□□□□□ -0.66
Msh3-201ENSMUST00000022220 Cib1Q9Z0F4 191 aa10.93□□□□□ -0.66
Msh3-201ENSMUST00000022220 Gm3752A6NAT4 150 aa10.93□□□□□ -0.66
Msh3-201ENSMUST00000022220 Galntl6E5D8G1 601 aa10.93□□□□□ -0.66
Msh3-201ENSMUST00000022220 1600015I10RikE9Q745 711 aa10.93□□□□□ -0.66
Msh3-201ENSMUST00000022220 SagP20443 403 aa10.93□□□□□ -0.66
Msh3-201ENSMUST00000022220 Kcnj6P48542 425 aa10.93□□□□□ -0.66
Retrieved 100 of 22,080 RNA–protein pairs in 23.4 ms