RNA–Protein interactions for RNA: ENST00000641588.1

CASC19-243, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,546 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-243ENST00000641588 ONECUT3O60422 494 aaPredicted RBP8.62□□□□□ -1.03
CASC19-243ENST00000641588 ZNF445P59923 1031 aa8.62□□□□□ -1.03
CASC19-243ENST00000641588 NUDT18Q6ZVK8 323 aa8.62□□□□□ -1.03
CASC19-243ENST00000641588 CASKIN1Q8WXD9 1431 aa8.62□□□□□ -1.03
CASC19-243ENST00000641588 NCOA3Q9Y6Q9 1424 aa8.62□□□□□ -1.03
CASC19-243ENST00000641588 CGNL1Q0VF96 1302 aa8.62□□□□□ -1.03
CASC19-243ENST00000641588 TEX14Q8IWB6 1497 aa8.61□□□□□ -1.03
CASC19-243ENST00000641588 ANKRD30AQ9BXX3 1397 aa8.61□□□□□ -1.03
CASC19-243ENST00000641588 TRIM6-TRIM34B2RNG4 842 aa8.61□□□□□ -1.03
CASC19-243ENST00000641588 MYSM1Q5VVJ2 828 aa8.61□□□□□ -1.03
CASC19-243ENST00000641588 PDCL2Q8N4E4 241 aa8.61□□□□□ -1.03
CASC19-243ENST00000641588 NGEFQ8N5V2 710 aa8.61□□□□□ -1.03
CASC19-243ENST00000641588 SNX21Q969T3 373 aa8.61□□□□□ -1.03
CASC19-243ENST00000641588 YY1AP1Q9H869 796 aa8.61□□□□□ -1.03
CASC19-243ENST00000641588 DDIT3P35638 169 aa8.6□□□□□ -1.03
CASC19-243ENST00000641588 MMP14P50281 582 aa8.6□□□□□ -1.03
CASC19-243ENST00000641588 AXDND1Q5T1B0 1012 aaPredicted RBP8.6□□□□□ -1.03
CASC19-243ENST00000641588 PRDM10Q9NQV6 1147 aa8.6□□□□□ -1.03
CASC19-243ENST00000641588 PARD3Q8TEW0 1356 aa8.6□□□□□ -1.03
CASC19-243ENST00000641588 ANKRD30BQ9BXX2 1392 aa8.6□□□□□ -1.03
CASC19-243ENST00000641588 NBPF26B4DH59 902 aa8.59□□□□□ -1.03
CASC19-243ENST00000641588 CLGNO14967 610 aa8.59□□□□□ -1.03
CASC19-243ENST00000641588 PDE3AQ14432 1141 aa8.59□□□□□ -1.03
CASC19-243ENST00000641588 KLHL40Q2TBA0 621 aa8.59□□□□□ -1.03
CASC19-243ENST00000641588 GAS2L3Q86XJ1 694 aa8.59□□□□□ -1.03
CASC19-243ENST00000641588 HSCBQ8IWL3 235 aa8.59□□□□□ -1.03
CASC19-243ENST00000641588 SMC5Q8IY18 1101 aa8.59□□□□□ -1.03
CASC19-243ENST00000641588 TATDN2Q93075 761 aa8.59□□□□□ -1.03
CASC19-243ENST00000641588 PNMA3Q9UL41 463 aa8.59□□□□□ -1.03
CASC19-243ENST00000641588 ATP1B4Q9UN42 357 aaPredicted RBP8.59□□□□□ -1.03
CASC19-243ENST00000641588 GCC2Q8IWJ2 1684 aa8.59□□□□□ -1.03
CASC19-243ENST00000641588 DNAJB2P25686 324 aa8.59□□□□□ -1.03
CASC19-243ENST00000641588 PROX2Q3B8N5 592 aa8.59□□□□□ -1.03
CASC19-243ENST00000641588 PACS2Q86VP3 889 aa8.59□□□□□ -1.03
CASC19-243ENST00000641588 RGS22Q8NE09 1264 aa8.59□□□□□ -1.03
CASC19-243ENST00000641588 KCNK17Q96T54 332 aa8.59□□□□□ -1.03
CASC19-243ENST00000641588 KIF3AQ9Y496 699 aa8.59□□□□□ -1.03
CASC19-243ENST00000641588 EFCAB5A4FU69 1503 aa8.58□□□□□ -1.04
CASC19-243ENST00000641588 PTPRKQ15262 1439 aa8.58□□□□□ -1.04
CASC19-243ENST00000641588 PLIN1O60240 522 aa8.58□□□□□ -1.04
CASC19-243ENST00000641588 RAB3GAP1Q15042 981 aa8.58□□□□□ -1.04
CASC19-243ENST00000641588 NBPF8Q3BBV2 869 aa8.58□□□□□ -1.04
CASC19-243ENST00000641588 PMFBP1Q8TBY8 1022 aa8.58□□□□□ -1.04
CASC19-243ENST00000641588 MPHOSPH9Q99550 1183 aa8.58□□□□□ -1.04
CASC19-243ENST00000641588 MTUS2Q5JR59 1369 aa8.57□□□□□ -1.04
CASC19-243ENST00000641588 USP47Q96K76 1375 aa8.57□□□□□ -1.04
CASC19-243ENST00000641588 SMAPO00193 183 aa8.57□□□□□ -1.04
CASC19-243ENST00000641588 CD46P15529 392 aa8.57□□□□□ -1.04
CASC19-243ENST00000641588 CLK2P49760 499 aaKnown RBP8.57□□□□□ -1.04
CASC19-243ENST00000641588 SYCP1Q15431 976 aa8.57□□□□□ -1.04
CASC19-243ENST00000641588 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.57□□□□□ -1.04
CASC19-243ENST00000641588 TMEM134Q9H6X4 195 aa8.57□□□□□ -1.04
CASC19-243ENST00000641588 OGFRQ9NZT2 677 aa8.57□□□□□ -1.04
CASC19-243ENST00000641588 CALCOCO1Q9P1Z2 691 aa8.57□□□□□ -1.04
CASC19-243ENST00000641588 THOC2Q8NI27 1593 aaKnown RBP8.57□□□□□ -1.04
CASC19-243ENST00000641588 DENND4BO75064 1496 aaPredicted RBP8.56□□□□□ -1.04
CASC19-243ENST00000641588 KIAA2012Q0VF49 1180 aa8.56□□□□□ -1.04
CASC19-243ENST00000641588 DIXDC1Q155Q3 683 aa8.56□□□□□ -1.04
CASC19-243ENST00000641588 CDAN1Q8IWY9 1227 aa8.56□□□□□ -1.04
CASC19-243ENST00000641588 TIGD1Q96MW7 591 aa8.56□□□□□ -1.04
CASC19-243ENST00000641588 EFCC1Q9HA90 598 aa8.56□□□□□ -1.04
CASC19-243ENST00000641588 TCOF1Q13428 1488 aaKnown RBP8.56□□□□□ -1.04
CASC19-243ENST00000641588 GAPVD1Q14C86 1478 aa8.56□□□□□ -1.04
CASC19-243ENST00000641588 CLASP1Q7Z460 1538 aa8.56□□□□□ -1.04
CASC19-243ENST00000641588 SKAP1Q86WV1 359 aa8.55□□□□□ -1.04
CASC19-243ENST00000641588 SULF1Q8IWU6 871 aa8.55□□□□□ -1.04
CASC19-243ENST00000641588 SPIRE2Q8WWL2 714 aa8.55□□□□□ -1.04
CASC19-243ENST00000641588 GEMIN8Q9NWZ8 242 aaKnown RBP8.55□□□□□ -1.04
CASC19-243ENST00000641588 UHRF1BP1Q6BDS2 1440 aa8.55□□□□□ -1.04
CASC19-243ENST00000641588 FGD5Q6ZNL6 1462 aa8.55□□□□□ -1.04
CASC19-243ENST00000641588 MBD5Q9P267 1494 aa8.55□□□□□ -1.04
CASC19-243ENST00000641588 PCF11O94913 1555 aaKnown RBP8.55□□□□□ -1.04
CASC19-243ENST00000641588 MCM6Q14566 821 aa8.54□□□□□ -1.04
CASC19-243ENST00000641588 TNPO1Q92973 898 aaKnown RBP8.54□□□□□ -1.04
CASC19-243ENST00000641588 ZNF622Q969S3 477 aaKnown RBP eCLIP8.54□□□□□ -1.04
CASC19-243ENST00000641588 DIAPH3Q9NSV4 1193 aa8.54□□□□□ -1.04
CASC19-243ENST00000641588 TULP2O00295 520 aa8.54□□□□□ -1.04
CASC19-243ENST00000641588 PSEN2P49810 448 aa8.54□□□□□ -1.04
CASC19-243ENST00000641588 CBX1P83916 185 aa8.54□□□□□ -1.04
CASC19-243ENST00000641588 XPCQ01831 940 aaPredicted RBP8.54□□□□□ -1.04
CASC19-243ENST00000641588 MMRN1Q13201 1228 aa8.54□□□□□ -1.04
CASC19-243ENST00000641588 C20orf194Q5TEA3 1177 aa8.54□□□□□ -1.04
CASC19-243ENST00000641588 DUSP27Q5VZP5 1158 aa8.54□□□□□ -1.04
CASC19-243ENST00000641588 CTR9Q6PD62 1173 aa8.54□□□□□ -1.04
CASC19-243ENST00000641588 ZNF771Q7L3S4 317 aaPredicted RBP8.54□□□□□ -1.04
CASC19-243ENST00000641588 SECISBP2LQ93073 1101 aaKnown RBP8.54□□□□□ -1.04
CASC19-243ENST00000641588 ZBED2Q9BTP6 218 aa8.54□□□□□ -1.04
CASC19-243ENST00000641588 C22orf23Q9BZE7 217 aa8.54□□□□□ -1.04
CASC19-243ENST00000641588 KIAA1468Q9P260 1216 aa8.54□□□□□ -1.04
CASC19-243ENST00000641588 CGNQ9P2M7 1197 aaKnown RBP8.54□□□□□ -1.04
CASC19-243ENST00000641588 LIMD1Q9UGP4 676 aa8.54□□□□□ -1.04
CASC19-243ENST00000641588 CAMSAP2Q08AD1 1489 aa8.54□□□□□ -1.04
CASC19-243ENST00000641588 KDM5CP41229 1560 aa8.53□□□□□ -1.04
CASC19-243ENST00000641588 ROCK1Q13464 1354 aa8.53□□□□□ -1.04
CASC19-243ENST00000641588 RIC3Q7Z5B4 369 aa8.53□□□□□ -1.04
CASC19-243ENST00000641588 TRMT2AQ8IZ69 625 aaKnown RBP8.53□□□□□ -1.04
CASC19-243ENST00000641588 FAM163AQ96GL9 167 aaPredicted RBP8.53□□□□□ -1.04
CASC19-243ENST00000641588 KIF14Q15058 1648 aa8.52□□□□□ -1.05
CASC19-243ENST00000641588 POLA1P09884 1462 aaPredicted RBP8.52□□□□□ -1.05
CASC19-243ENST00000641588 RALGAPBQ86X10 1494 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms