RNA–Protein interactions for RNA: ENST00000641491.1

PHGDH-218, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 986 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-218ENST00000641491 MAP3K19Q56UN5 1328 aa17.34■□□□□ 0.37
PHGDH-218ENST00000641491 KIF24Q5T7B8 1368 aa17.34■□□□□ 0.37
PHGDH-218ENST00000641491 CCDC125Q86Z20 511 aa17.34■□□□□ 0.37
PHGDH-218ENST00000641491 KIAA0232Q92628 1395 aa17.34■□□□□ 0.37
PHGDH-218ENST00000641491 TRPC5Q9UL62 973 aaPredicted RBP17.34■□□□□ 0.37
PHGDH-218ENST00000641491 EMILIN1Q9Y6C2 1016 aa17.34■□□□□ 0.37
PHGDH-218ENST00000641491 USP54Q70EL1 1684 aa17.33■□□□□ 0.37
PHGDH-218ENST00000641491 USP21Q9UK80 565 aa17.33■□□□□ 0.36
PHGDH-218ENST00000641491 COL22A1Q8NFW1 1626 aaPredicted RBP17.32■□□□□ 0.36
PHGDH-218ENST00000641491 CCER2I3L3R5 266 aa17.32■□□□□ 0.36
PHGDH-218ENST00000641491 EVA1CP58658 441 aa17.32■□□□□ 0.36
PHGDH-218ENST00000641491 MIER1Q8N108 512 aa17.32■□□□□ 0.36
PHGDH-218ENST00000641491 FNBP4Q8N3X1 1017 aaPredicted RBP17.32■□□□□ 0.36
PHGDH-218ENST00000641491 POLKQ9UBT6 870 aa17.32■□□□□ 0.36
PHGDH-218ENST00000641491 PHRF1Q9P1Y6 1649 aaKnown RBP17.32■□□□□ 0.36
PHGDH-218ENST00000641491 CPDO75976 1380 aa17.31■□□□□ 0.36
PHGDH-218ENST00000641491 ARHGEF25Q86VW2 580 aa17.31■□□□□ 0.36
PHGDH-218ENST00000641491 DIAPH1O60610 1272 aaKnown RBP17.3■□□□□ 0.36
PHGDH-218ENST00000641491 NEFMP07197 916 aa17.3■□□□□ 0.36
PHGDH-218ENST00000641491 FBLN1P23142 703 aa17.3■□□□□ 0.36
PHGDH-218ENST00000641491 HOXC9P31274 260 aa17.3■□□□□ 0.36
PHGDH-218ENST00000641491 CHRNA2Q15822 529 aa17.3■□□□□ 0.36
PHGDH-218ENST00000641491 IP6K1Q92551 441 aa17.3■□□□□ 0.36
PHGDH-218ENST00000641491 LTV1Q96GA3 475 aaPredicted RBP17.3■□□□□ 0.36
PHGDH-218ENST00000641491 NFAT5O94916 1531 aa17.3■□□□□ 0.36
PHGDH-218ENST00000641491 U2SURPO15042 1029 aaKnown RBP17.29■□□□□ 0.36
PHGDH-218ENST00000641491 BLMP54132 1417 aaPredicted RBP17.29■□□□□ 0.36
PHGDH-218ENST00000641491 STRN4Q9NRL3 753 aa17.27■□□□□ 0.36
PHGDH-218ENST00000641491 INSRP06213 1382 aa17.27■□□□□ 0.35
PHGDH-218ENST00000641491 ABCC6O95255 1503 aa17.26■□□□□ 0.35
PHGDH-218ENST00000641491 ANKRD24Q8TF21 1146 aa17.26■□□□□ 0.35
PHGDH-218ENST00000641491 PNNQ9H307 717 aaKnown RBP17.26■□□□□ 0.35
PHGDH-218ENST00000641491 BTG4Q9NY30 223 aa17.26■□□□□ 0.35
PHGDH-218ENST00000641491 CCDC9Q9Y3X0 531 aaKnown RBP17.26■□□□□ 0.35
PHGDH-218ENST00000641491 ATRNO75882 1429 aa17.26■□□□□ 0.35
PHGDH-218ENST00000641491 HSP90AB2PQ58FF8 381 aa17.25■□□□□ 0.35
PHGDH-218ENST00000641491 ABCA3Q99758 1704 aa17.24■□□□□ 0.35
PHGDH-218ENST00000641491 U2AF1L5P0DN76 240 aaPredicted RBP17.24■□□□□ 0.35
PHGDH-218ENST00000641491 U2AF1Q01081 240 aaKnown RBP eCLIP17.24■□□□□ 0.35
PHGDH-218ENST00000641491 TOM1L2Q6ZVM7 507 aa17.24■□□□□ 0.35
PHGDH-218ENST00000641491 NLRP2Q9NX02 1062 aa17.24■□□□□ 0.35
PHGDH-218ENST00000641491 FAM83GA6ND36 823 aa17.23■□□□□ 0.35
PHGDH-218ENST00000641491 MARF1Q9Y4F3 1742 aaKnown RBP17.23■□□□□ 0.35
PHGDH-218ENST00000641491 LTN1O94822 1766 aa17.23■□□□□ 0.35
PHGDH-218ENST00000641491 COL14A1Q05707 1796 aaKnown RBP17.23■□□□□ 0.35
PHGDH-218ENST00000641491 FAM9BQ8IZU0 186 aa17.22■□□□□ 0.35
PHGDH-218ENST00000641491 EP400Q96L91 3159 aa17.22■□□□□ 0.35
PHGDH-218ENST00000641491 CRYBG1Q9Y4K1 1723 aa17.21■□□□□ 0.35
PHGDH-218ENST00000641491 EIF4A2Q14240 407 aaKnown RBP17.21■□□□□ 0.35
PHGDH-218ENST00000641491 ERBB3P21860 1342 aa17.21■□□□□ 0.34
PHGDH-218ENST00000641491 MAP2P11137 1827 aaKnown RBP17.2■□□□□ 0.34
PHGDH-218ENST00000641491 GJD4Q96KN9 370 aaPredicted RBP17.2■□□□□ 0.34
PHGDH-218ENST00000641491 MAPK8IP3Q9UPT6 1336 aa17.2■□□□□ 0.34
PHGDH-218ENST00000641491 WDR17Q8IZU2 1322 aa17.19■□□□□ 0.34
PHGDH-218ENST00000641491 BCL9LQ86UU0 1499 aa17.18■□□□□ 0.34
PHGDH-218ENST00000641491 UNC5CLQ8IV45 518 aa17.18■□□□□ 0.34
PHGDH-218ENST00000641491 A0A0G2JS52 829 aa17.17■□□□□ 0.34
PHGDH-218ENST00000641491 IL13P35225 146 aa17.17■□□□□ 0.34
PHGDH-218ENST00000641491 MYT1Q01538 1121 aa17.17■□□□□ 0.34
PHGDH-218ENST00000641491 RAPGEF4Q8WZA2 1011 aa17.17■□□□□ 0.34
PHGDH-218ENST00000641491 USP35Q9P2H5 1018 aa17.17■□□□□ 0.34
PHGDH-218ENST00000641491 AXIN2Q9Y2T1 843 aa17.17■□□□□ 0.34
PHGDH-218ENST00000641491 COL5A2P05997 1499 aaPredicted RBP17.17■□□□□ 0.34
PHGDH-218ENST00000641491 PEAK1Q9H792 1746 aa17.16■□□□□ 0.34
PHGDH-218ENST00000641491 SULT6B1Q6IMI4 303 aa17.16■□□□□ 0.34
PHGDH-218ENST00000641491 CRB1P82279 1406 aa17.15■□□□□ 0.34
PHGDH-218ENST00000641491 HMOX1P09601 288 aa17.15■□□□□ 0.34
PHGDH-218ENST00000641491 COL3A1P02461 1466 aaPredicted RBP17.14■□□□□ 0.33
PHGDH-218ENST00000641491 TATP17735 454 aaPredicted RBP17.14■□□□□ 0.33
PHGDH-218ENST00000641491 LARP1Q6PKG0 1096 aaKnown RBP17.14■□□□□ 0.33
PHGDH-218ENST00000641491 FCHSD2O94868 740 aa17.13■□□□□ 0.33
PHGDH-218ENST00000641491 CCDC184Q52MB2 194 aa17.13■□□□□ 0.33
PHGDH-218ENST00000641491 DEFB132Q7Z7B7 95 aa17.13■□□□□ 0.33
PHGDH-218ENST00000641491 USHBP1Q8N6Y0 703 aa17.13■□□□□ 0.33
PHGDH-218ENST00000641491 EYA1Q99502 592 aa17.13■□□□□ 0.33
PHGDH-218ENST00000641491 CARD10Q9BWT7 1032 aa17.13■□□□□ 0.33
PHGDH-218ENST00000641491 IGSF1Q8N6C5 1336 aa17.13■□□□□ 0.33
PHGDH-218ENST00000641491 PLCH1Q4KWH8 1693 aa17.13■□□□□ 0.33
PHGDH-218ENST00000641491 CAMTA1Q9Y6Y1 1673 aa17.13■□□□□ 0.33
PHGDH-218ENST00000641491 SLIT2O94813 1529 aa17.12■□□□□ 0.33
PHGDH-218ENST00000641491 SF3B2Q13435 895 aaKnown RBP17.12■□□□□ 0.33
PHGDH-218ENST00000641491 PNISRQ8TF01 805 aaKnown RBP17.12■□□□□ 0.33
PHGDH-218ENST00000641491 FAM208AQ9UK61 1670 aaKnown RBP17.12■□□□□ 0.33
PHGDH-218ENST00000641491 LMO7Q8WWI1 1683 aa17.11■□□□□ 0.33
PHGDH-218ENST00000641491 PRKAR2BP31323 418 aa17.11■□□□□ 0.33
PHGDH-218ENST00000641491 VPS72Q15906 364 aa17.11■□□□□ 0.33
PHGDH-218ENST00000641491 NBPF6Q5VWK0 638 aa17.11■□□□□ 0.33
PHGDH-218ENST00000641491 TCP11L2Q8N4U5 519 aa17.11■□□□□ 0.33
PHGDH-218ENST00000641491 NBPF4Q96M43 638 aa17.11■□□□□ 0.33
PHGDH-218ENST00000641491 CDCA7Q9BWT1 371 aaPredicted RBP17.11■□□□□ 0.33
PHGDH-218ENST00000641491 ADAMTS8Q9UP79 889 aa17.11■□□□□ 0.33
PHGDH-218ENST00000641491 THRAP3Q9Y2W1 955 aaKnown RBP17.11■□□□□ 0.33
PHGDH-218ENST00000641491 NWD2Q9ULI1 1742 aa17.1■□□□□ 0.33
PHGDH-218ENST00000641491 IL2RBP14784 551 aa17.09■□□□□ 0.33
PHGDH-218ENST00000641491 RUNDC1Q96C34 613 aa17.09■□□□□ 0.33
PHGDH-218ENST00000641491 LRP5O75197 1615 aa17.08■□□□□ 0.32
PHGDH-218ENST00000641491 AMOTQ4VCS5 1084 aa17.08■□□□□ 0.32
PHGDH-218ENST00000641491 PLEKHO1Q53GL0 409 aaPredicted RBP17.08■□□□□ 0.32
PHGDH-218ENST00000641491 CCDC146Q8IYE0 955 aa17.08■□□□□ 0.32
PHGDH-218ENST00000641491 SPG7Q9UQ90 795 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms