RNA–Protein interactions for RNA: ENST00000641272.1

PHGDH-213, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-213ENST00000641272 CARD11Q9BXL7 1154 aa23.82■■□□□ 1.4
PHGDH-213ENST00000641272 OVOS2A0A0G2JMS6 1433 aa23.82■■□□□ 1.4
PHGDH-213ENST00000641272 OVOS2A0A0J9YW53 1432 aa23.82■■□□□ 1.4
PHGDH-213ENST00000641272 OVOS2Q6IE36 1432 aa23.82■■□□□ 1.4
PHGDH-213ENST00000641272 AXIN2Q9Y2T1 843 aa23.81■■□□□ 1.4
PHGDH-213ENST00000641272 TTC21AQ8NDW8 1320 aa23.81■■□□□ 1.4
PHGDH-213ENST00000641272 SBNO2Q9Y2G9 1366 aa23.8■■□□□ 1.4
PHGDH-213ENST00000641272 USP54Q70EL1 1684 aa23.8■■□□□ 1.4
PHGDH-213ENST00000641272 LTN1O94822 1766 aa23.8■■□□□ 1.4
PHGDH-213ENST00000641272 CD163L1Q9NR16 1453 aa23.8■■□□□ 1.4
PHGDH-213ENST00000641272 PARD3Q8TEW0 1356 aa23.79■■□□□ 1.4
PHGDH-213ENST00000641272 WDR17Q8IZU2 1322 aa23.79■■□□□ 1.4
PHGDH-213ENST00000641272 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.78■■□□□ 1.4
PHGDH-213ENST00000641272 ZNF692Q9BU19 519 aaPredicted RBP23.78■■□□□ 1.4
PHGDH-213ENST00000641272 ARHGEF25Q86VW2 580 aa23.77■■□□□ 1.4
PHGDH-213ENST00000641272 CSB-PGBD3P0DP91 1061 aa23.76■■□□□ 1.39
PHGDH-213ENST00000641272 KCNH5Q8NCM2 988 aa23.76■■□□□ 1.39
PHGDH-213ENST00000641272 RGPD3A6NKT7 1758 aaPredicted RBP23.75■■□□□ 1.39
PHGDH-213ENST00000641272 RGPD4Q7Z3J3 1758 aa23.75■■□□□ 1.39
PHGDH-213ENST00000641272 DDB1Q16531 1140 aa23.75■■□□□ 1.39
PHGDH-213ENST00000641272 TMC1Q8TDI8 760 aa23.75■■□□□ 1.39
PHGDH-213ENST00000641272 ABCC6O95255 1503 aa23.74■■□□□ 1.39
PHGDH-213ENST00000641272 NME9Q86XW9 330 aa23.74■■□□□ 1.39
PHGDH-213ENST00000641272 A0A1W2PP64 1363 aa23.7■■□□□ 1.38
PHGDH-213ENST00000641272 PTF1AQ7RTS3 328 aa23.7■■□□□ 1.38
PHGDH-213ENST00000641272 USP31Q70CQ4 1352 aa23.69■■□□□ 1.38
PHGDH-213ENST00000641272 SLC12A5Q9H2X9 1139 aa23.69■■□□□ 1.38
PHGDH-213ENST00000641272 TNS2Q63HR2 1409 aa23.68■■□□□ 1.38
PHGDH-213ENST00000641272 EDC4Q6P2E9 1401 aaKnown RBP23.68■■□□□ 1.38
PHGDH-213ENST00000641272 MARCH10Q8NA82 808 aaPredicted RBP23.68■■□□□ 1.38
PHGDH-213ENST00000641272 CARD10Q9BWT7 1032 aa23.68■■□□□ 1.38
PHGDH-213ENST00000641272 HDGFL2Q7Z4V5 671 aaPredicted RBP23.67■■□□□ 1.38
PHGDH-213ENST00000641272 NBPF14Q5TI25 921 aa23.66■■□□□ 1.38
PHGDH-213ENST00000641272 CCDC7Q96M83 1385 aa23.65■■□□□ 1.38
PHGDH-213ENST00000641272 ERBB3P21860 1342 aa23.64■■□□□ 1.38
PHGDH-213ENST00000641272 NHSQ6T4R5 1651 aa23.64■■□□□ 1.37
PHGDH-213ENST00000641272 C11orf95C9JLR9 678 aaPredicted RBP23.63■■□□□ 1.37
PHGDH-213ENST00000641272 CDCA7Q9BWT1 371 aaPredicted RBP23.63■■□□□ 1.37
PHGDH-213ENST00000641272 ANO8Q9HCE9 1232 aaPredicted RBP23.63■■□□□ 1.37
PHGDH-213ENST00000641272 CASZ1Q86V15 1759 aa23.62■■□□□ 1.37
PHGDH-213ENST00000641272 NLRP2Q9NX02 1062 aa23.61■■□□□ 1.37
PHGDH-213ENST00000641272 TERF2IPQ9NYB0 399 aa23.61■■□□□ 1.37
PHGDH-213ENST00000641272 ST20-MTHFSA0A0A6YYL1 179 aa23.6■■□□□ 1.37
PHGDH-213ENST00000641272 BCL11BQ9C0K0 894 aaPredicted RBP23.6■■□□□ 1.37
PHGDH-213ENST00000641272 BCL9O00512 1426 aa23.59■■□□□ 1.37
PHGDH-213ENST00000641272 TESK2Q96S53 571 aa23.59■■□□□ 1.37
PHGDH-213ENST00000641272 FAM208AQ9UK61 1670 aaKnown RBP23.59■■□□□ 1.37
PHGDH-213ENST00000641272 EXOC5O00471 708 aa23.58■■□□□ 1.37
PHGDH-213ENST00000641272 ANKRD24Q8TF21 1146 aa23.58■■□□□ 1.37
PHGDH-213ENST00000641272 PLSCR1O15162 318 aa23.57■■□□□ 1.36
PHGDH-213ENST00000641272 BTAF1O14981 1849 aa23.56■■□□□ 1.36
PHGDH-213ENST00000641272 ACSBG1Q96GR2 724 aa23.56■■□□□ 1.36
PHGDH-213ENST00000641272 RGPD2P0DJD1 1756 aa23.55■■□□□ 1.36
PHGDH-213ENST00000641272 NINLQ9Y2I6 1382 aa23.54■■□□□ 1.36
PHGDH-213ENST00000641272 KCNQ2O43526 872 aa23.54■■□□□ 1.36
PHGDH-213ENST00000641272 LTV1Q96GA3 475 aaPredicted RBP23.54■■□□□ 1.36
PHGDH-213ENST00000641272 IL2RBP14784 551 aa23.53■■□□□ 1.36
PHGDH-213ENST00000641272 PROM2Q8N271 834 aa23.53■■□□□ 1.36
PHGDH-213ENST00000641272 PPP1R1BQ9UD71 204 aaPredicted RBP23.53■■□□□ 1.36
PHGDH-213ENST00000641272 USP47Q96K76 1375 aa23.52■■□□□ 1.36
PHGDH-213ENST00000641272 MYOM1P52179 1685 aa23.52■■□□□ 1.36
PHGDH-213ENST00000641272 TRIM26Q12899 539 aaPredicted RBP23.52■■□□□ 1.36
PHGDH-213ENST00000641272 PDGFDQ9GZP0 370 aaPredicted RBP23.52■■□□□ 1.36
PHGDH-213ENST00000641272 SPON1Q9HCB6 807 aa23.52■■□□□ 1.36
PHGDH-213ENST00000641272 KIF20BQ96Q89 1820 aa23.52■■□□□ 1.36
PHGDH-213ENST00000641272 PUS7Q96PZ0 661 aaKnown RBP23.51■■□□□ 1.35
PHGDH-213ENST00000641272 TXNRD1Q16881 649 aa23.5■■□□□ 1.35
PHGDH-213ENST00000641272 ANKRD36BQ8N2N9 1353 aa23.5■■□□□ 1.35
PHGDH-213ENST00000641272 DOT1LQ8TEK3 1739 aa23.5■■□□□ 1.35
PHGDH-213ENST00000641272 KAT6BQ8WYB5 2073 aa23.5■■□□□ 1.35
PHGDH-213ENST00000641272 PAPPAQ13219 1627 aa23.49■■□□□ 1.35
PHGDH-213ENST00000641272 FBLN1P23142 703 aa23.49■■□□□ 1.35
PHGDH-213ENST00000641272 COG3Q96JB2 828 aa23.49■■□□□ 1.35
PHGDH-213ENST00000641272 SHANK3Q9BYB0 1731 aa23.49■■□□□ 1.35
PHGDH-213ENST00000641272 MAP3K19Q56UN5 1328 aa23.49■■□□□ 1.35
PHGDH-213ENST00000641272 ZBTB7AO95365 584 aa23.47■■□□□ 1.35
PHGDH-213ENST00000641272 IP6K1Q92551 441 aa23.47■■□□□ 1.35
PHGDH-213ENST00000641272 STK32BQ9NY57 414 aa23.46■■□□□ 1.35
PHGDH-213ENST00000641272 HOXC9P31274 260 aa23.44■■□□□ 1.34
PHGDH-213ENST00000641272 AMPHP49418 695 aa23.44■■□□□ 1.34
PHGDH-213ENST00000641272 MEGF6O75095 1541 aa23.43■■□□□ 1.34
PHGDH-213ENST00000641272 TMF1P82094 1093 aa23.43■■□□□ 1.34
PHGDH-213ENST00000641272 GGNBP2Q9H3C7 697 aa23.43■■□□□ 1.34
PHGDH-213ENST00000641272 RRS1Q15050 365 aaKnown RBP23.42■■□□□ 1.34
PHGDH-213ENST00000641272 DDX54Q8TDD1 881 aaKnown RBP23.42■■□□□ 1.34
PHGDH-213ENST00000641272 SLC15A2Q16348 729 aa23.41■■□□□ 1.34
PHGDH-213ENST00000641272 RTL1A6NKG5 1358 aa23.4■■□□□ 1.34
PHGDH-213ENST00000641272 ATF5Q9Y2D1 282 aaPredicted RBP23.4■■□□□ 1.34
PHGDH-213ENST00000641272 TUBGCP6Q96RT7 1819 aa23.38■■□□□ 1.33
PHGDH-213ENST00000641272 USHBP1Q8N6Y0 703 aa23.38■■□□□ 1.33
PHGDH-213ENST00000641272 FYB1O15117 783 aa23.36■■□□□ 1.33
PHGDH-213ENST00000641272 SLC24A1O60721 1099 aa23.36■■□□□ 1.33
PHGDH-213ENST00000641272 ZNF827Q17R98 1081 aa23.36■■□□□ 1.33
PHGDH-213ENST00000641272 SMG6Q86US8 1419 aaKnown RBP23.35■■□□□ 1.33
PHGDH-213ENST00000641272 NSD3Q9BZ95 1437 aa23.35■■□□□ 1.33
PHGDH-213ENST00000641272 PTGER2P43116 358 aa23.35■■□□□ 1.33
PHGDH-213ENST00000641272 SYTL4Q96C24 671 aaPredicted RBP23.35■■□□□ 1.33
PHGDH-213ENST00000641272 LRRC4BQ9NT99 713 aa23.34■■□□□ 1.33
PHGDH-213ENST00000641272 LY75O60449 1722 aa23.33■■□□□ 1.33
PHGDH-213ENST00000641272 NSD2O96028 1365 aa23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms