RNA–Protein interactions for RNA: ENST00000640440.1

HNRNPU-229, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 3

Gene HNRNPU, Length 871 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-229ENST00000640440 EDC4Q6P2E9 1401 aaKnown RBP20.28■□□□□ 0.84
HNRNPU-229ENST00000640440 ARHGEF25Q86VW2 580 aa20.28■□□□□ 0.84
HNRNPU-229ENST00000640440 SRCAPQ6ZRS2 3230 aa20.27■□□□□ 0.84
HNRNPU-229ENST00000640440 USP31Q70CQ4 1352 aa20.27■□□□□ 0.84
HNRNPU-229ENST00000640440 TERF2IPQ9NYB0 399 aa20.27■□□□□ 0.84
HNRNPU-229ENST00000640440 AXIN2Q9Y2T1 843 aa20.27■□□□□ 0.84
HNRNPU-229ENST00000640440 THRAP3Q9Y2W1 955 aaKnown RBP20.27■□□□□ 0.84
HNRNPU-229ENST00000640440 NINLQ9Y2I6 1382 aa20.26■□□□□ 0.83
HNRNPU-229ENST00000640440 LRRC37A3O60309 1634 aa20.26■□□□□ 0.83
HNRNPU-229ENST00000640440 CLSPNQ9HAW4 1339 aa20.26■□□□□ 0.83
HNRNPU-229ENST00000640440 BAG6P46379 1132 aa20.25■□□□□ 0.83
HNRNPU-229ENST00000640440 PDE3BQ13370 1112 aa20.25■□□□□ 0.83
HNRNPU-229ENST00000640440 TOM1L2Q6ZVM7 507 aa20.25■□□□□ 0.83
HNRNPU-229ENST00000640440 ABCC6O95255 1503 aa20.25■□□□□ 0.83
HNRNPU-229ENST00000640440 SLC24A1O60721 1099 aa20.24■□□□□ 0.83
HNRNPU-229ENST00000640440 FAM196AQ6ZSG2 479 aa20.24■□□□□ 0.83
HNRNPU-229ENST00000640440 WDR17Q8IZU2 1322 aa20.24■□□□□ 0.83
HNRNPU-229ENST00000640440 CSB-PGBD3P0DP91 1061 aa20.22■□□□□ 0.83
HNRNPU-229ENST00000640440 TIMELESSQ9UNS1 1208 aa20.22■□□□□ 0.83
HNRNPU-229ENST00000640440 OVOS2A0A0J9YW53 1432 aa20.21■□□□□ 0.83
HNRNPU-229ENST00000640440 OVOS2Q6IE36 1432 aa20.21■□□□□ 0.83
HNRNPU-229ENST00000640440 SBF2Q86WG5 1849 aa20.21■□□□□ 0.83
HNRNPU-229ENST00000640440 TRIM37O94972 964 aa20.21■□□□□ 0.83
HNRNPU-229ENST00000640440 TMF1P82094 1093 aa20.21■□□□□ 0.83
HNRNPU-229ENST00000640440 DISP2A7MBM2 1401 aa20.2■□□□□ 0.82
HNRNPU-229ENST00000640440 EN1Q05925 392 aaPredicted RBP20.2■□□□□ 0.82
HNRNPU-229ENST00000640440 PEAK1Q9H792 1746 aa20.19■□□□□ 0.82
HNRNPU-229ENST00000640440 KAT6BQ8WYB5 2073 aa20.19■□□□□ 0.82
HNRNPU-229ENST00000640440 ANKRD36BQ8N2N9 1353 aa20.18■□□□□ 0.82
HNRNPU-229ENST00000640440 CARD10Q9BWT7 1032 aa20.17■□□□□ 0.82
HNRNPU-229ENST00000640440 KIF20BQ96Q89 1820 aa20.17■□□□□ 0.82
HNRNPU-229ENST00000640440 MYOM1P52179 1685 aa20.16■□□□□ 0.82
HNRNPU-229ENST00000640440 DDB1Q16531 1140 aa20.16■□□□□ 0.82
HNRNPU-229ENST00000640440 CCER1Q8TC90 406 aaPredicted RBP20.15■□□□□ 0.82
HNRNPU-229ENST00000640440 OVOS2A0A0G2JMS6 1433 aa20.15■□□□□ 0.82
HNRNPU-229ENST00000640440 RREB1Q92766 1687 aa20.14■□□□□ 0.81
HNRNPU-229ENST00000640440 CCDC7Q96M83 1385 aa20.14■□□□□ 0.81
HNRNPU-229ENST00000640440 APBA3O96018 575 aa20.14■□□□□ 0.81
HNRNPU-229ENST00000640440 CDCA7Q9BWT1 371 aaPredicted RBP20.14■□□□□ 0.81
HNRNPU-229ENST00000640440 ERBB3P21860 1342 aa20.13■□□□□ 0.81
HNRNPU-229ENST00000640440 EZH2Q15910 746 aaKnown RBP20.13■□□□□ 0.81
HNRNPU-229ENST00000640440 CDCA8Q53HL2 280 aa20.13■□□□□ 0.81
HNRNPU-229ENST00000640440 COG3Q96JB2 828 aa20.13■□□□□ 0.81
HNRNPU-229ENST00000640440 NUP188Q5SRE5 1749 aa20.12■□□□□ 0.81
HNRNPU-229ENST00000640440 FAM208AQ9UK61 1670 aaKnown RBP20.12■□□□□ 0.81
HNRNPU-229ENST00000640440 PSDA5PKW4 1024 aaPredicted RBP20.11■□□□□ 0.81
HNRNPU-229ENST00000640440 CAMKK2Q96RR4 588 aa20.11■□□□□ 0.81
HNRNPU-229ENST00000640440 NLRP2Q9NX02 1062 aa20.11■□□□□ 0.81
HNRNPU-229ENST00000640440 RGPD2P0DJD1 1756 aa20.11■□□□□ 0.81
HNRNPU-229ENST00000640440 C11orf95C9JLR9 678 aaPredicted RBP20.1■□□□□ 0.81
HNRNPU-229ENST00000640440 ANKRD24Q8TF21 1146 aa20.1■□□□□ 0.81
HNRNPU-229ENST00000640440 PARD3Q8TEW0 1356 aa20.09■□□□□ 0.81
HNRNPU-229ENST00000640440 MARCH10Q8NA82 808 aaPredicted RBP20.09■□□□□ 0.81
HNRNPU-229ENST00000640440 TNS2Q63HR2 1409 aa20.09■□□□□ 0.81
HNRNPU-229ENST00000640440 RGPD3A6NKT7 1758 aaPredicted RBP20.08■□□□□ 0.8
HNRNPU-229ENST00000640440 RGPD4Q7Z3J3 1758 aa20.08■□□□□ 0.8
HNRNPU-229ENST00000640440 MAP3K19Q56UN5 1328 aa20.07■□□□□ 0.8
HNRNPU-229ENST00000640440 FBLN1P23142 703 aa20.07■□□□□ 0.8
HNRNPU-229ENST00000640440 IP6K1Q92551 441 aa20.07■□□□□ 0.8
HNRNPU-229ENST00000640440 GGNBP2Q9H3C7 697 aa20.07■□□□□ 0.8
HNRNPU-229ENST00000640440 LRP5O75197 1615 aa20.06■□□□□ 0.8
HNRNPU-229ENST00000640440 EXOC5O00471 708 aa20.06■□□□□ 0.8
HNRNPU-229ENST00000640440 LTV1Q96GA3 475 aaPredicted RBP20.06■□□□□ 0.8
HNRNPU-229ENST00000640440 FYB1O15117 783 aa20.05■□□□□ 0.8
HNRNPU-229ENST00000640440 BCL9O00512 1426 aa20.04■□□□□ 0.8
HNRNPU-229ENST00000640440 NSD3Q9BZ95 1437 aa20.04■□□□□ 0.8
HNRNPU-229ENST00000640440 AMPHP49418 695 aa20.04■□□□□ 0.8
HNRNPU-229ENST00000640440 R3HDM1Q15032 1099 aaKnown RBP20.04■□□□□ 0.8
HNRNPU-229ENST00000640440 IL2RBP14784 551 aa20.03■□□□□ 0.8
HNRNPU-229ENST00000640440 HOXC9P31274 260 aa20.03■□□□□ 0.8
HNRNPU-229ENST00000640440 PTF1AQ7RTS3 328 aa20.03■□□□□ 0.8
HNRNPU-229ENST00000640440 RRS1Q15050 365 aaKnown RBP20.02■□□□□ 0.8
HNRNPU-229ENST00000640440 NHSQ6T4R5 1651 aa20.01■□□□□ 0.79
HNRNPU-229ENST00000640440 RTL1A6NKG5 1358 aa20.01■□□□□ 0.79
HNRNPU-229ENST00000640440 POLR3GLQ9BT43 218 aa20.01■□□□□ 0.79
HNRNPU-229ENST00000640440 CARD14Q9BXL6 1004 aa20.01■□□□□ 0.79
HNRNPU-229ENST00000640440 BCL11BQ9C0K0 894 aaPredicted RBP20.01■□□□□ 0.79
HNRNPU-229ENST00000640440 EIF4G2P78344 907 aaKnown RBP eCLIP20■□□□□ 0.792e-12■■■■□ 22
HNRNPU-229ENST00000640440 MAP2P11137 1827 aaKnown RBP19.99■□□□□ 0.79
HNRNPU-229ENST00000640440 HSPA5P11021 654 aaKnown RBP19.99■□□□□ 0.79
HNRNPU-229ENST00000640440 BTAF1O14981 1849 aa19.98■□□□□ 0.79
HNRNPU-229ENST00000640440 SHANK3Q9BYB0 1731 aa19.98■□□□□ 0.79
HNRNPU-229ENST00000640440 ANKRD26Q9UPS8 1709 aa19.97■□□□□ 0.79
HNRNPU-229ENST00000640440 PLSCR1O15162 318 aa19.96■□□□□ 0.79
HNRNPU-229ENST00000640440 NBPF14Q5TI25 921 aa19.96■□□□□ 0.79
HNRNPU-229ENST00000640440 ACSBG1Q96GR2 724 aa19.95■□□□□ 0.78
HNRNPU-229ENST00000640440 SMG6Q86US8 1419 aaKnown RBP19.94■□□□□ 0.78
HNRNPU-229ENST00000640440 KCNQ2O43526 872 aa19.94■□□□□ 0.78
HNRNPU-229ENST00000640440 FLT4P35916 1363 aa19.94■□□□□ 0.78
HNRNPU-229ENST00000640440 MEGF6O75095 1541 aa19.93■□□□□ 0.78
HNRNPU-229ENST00000640440 CGNL1Q0VF96 1302 aa19.93■□□□□ 0.78
HNRNPU-229ENST00000640440 DOT1LQ8TEK3 1739 aa19.93■□□□□ 0.78
HNRNPU-229ENST00000640440 INSRP06213 1382 aa19.92■□□□□ 0.78
HNRNPU-229ENST00000640440 HSP90AB2PQ58FF8 381 aa19.91■□□□□ 0.78
HNRNPU-229ENST00000640440 NBPF6Q5VWK0 638 aa19.91■□□□□ 0.78
HNRNPU-229ENST00000640440 USHBP1Q8N6Y0 703 aa19.91■□□□□ 0.78
HNRNPU-229ENST00000640440 DDX54Q8TDD1 881 aaKnown RBP19.91■□□□□ 0.78
HNRNPU-229ENST00000640440 NBPF4Q96M43 638 aa19.91■□□□□ 0.78
HNRNPU-229ENST00000640440 KIF24Q5T7B8 1368 aa19.91■□□□□ 0.78
HNRNPU-229ENST00000640440 PROM2Q8N271 834 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms