RNA–Protein interactions for RNA: ENST00000639658.1

POLR2B-213, Transcript of RNA polymerase II subunit B, humanhuman

TSL 5 BASIC

Gene POLR2B, Length 3,300 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2B-213ENST00000639658 CCDC9Q9Y3X0 531 aaKnown RBP6.89□□□□□ -1.31
POLR2B-213ENST00000639658 SATB1Q01826 763 aa6.88□□□□□ -1.31
POLR2B-213ENST00000639658 NCBP1Q09161 790 aaKnown RBP6.88□□□□□ -1.31
POLR2B-213ENST00000639658 WDR63Q8IWG1 891 aa6.88□□□□□ -1.31
POLR2B-213ENST00000639658 IQUBQ8NA54 791 aa6.88□□□□□ -1.31
POLR2B-213ENST00000639658 KIF18AQ8NI77 898 aa6.88□□□□□ -1.31
POLR2B-213ENST00000639658 MYCBPQ99417 103 aaPredicted RBP6.88□□□□□ -1.31
POLR2B-213ENST00000639658 PLCD4Q9BRC7 762 aa6.88□□□□□ -1.31
POLR2B-213ENST00000639658 CADPSQ9ULU8 1353 aa6.88□□□□□ -1.31
POLR2B-213ENST00000639658 TOPBP1Q92547 1522 aa6.88□□□□□ -1.31
POLR2B-213ENST00000639658 APPP05067 770 aa6.88□□□□□ -1.31
POLR2B-213ENST00000639658 GPT2Q8TD30 523 aa6.88□□□□□ -1.31
POLR2B-213ENST00000639658 PIK3R4Q99570 1358 aa6.88□□□□□ -1.31
POLR2B-213ENST00000639658 SMTNL1A8MU46 457 aa6.88□□□□□ -1.31
POLR2B-213ENST00000639658 RARSP54136 660 aaKnown RBP6.88□□□□□ -1.31
POLR2B-213ENST00000639658 NBPF11Q86T75 865 aa6.88□□□□□ -1.31
POLR2B-213ENST00000639658 KRT222Q8N1A0 295 aa6.88□□□□□ -1.31
POLR2B-213ENST00000639658 NOS1P29475 1434 aa6.87□□□□□ -1.31
POLR2B-213ENST00000639658 RNF20Q5VTR2 975 aa6.87□□□□□ -1.31
POLR2B-213ENST00000639658 AATKQ6ZMQ8 1374 aa6.87□□□□□ -1.31
POLR2B-213ENST00000639658 ABCA9Q8IUA7 1624 aa6.87□□□□□ -1.31
POLR2B-213ENST00000639658 NPM1P06748 294 aaKnown RBP eCLIP6.87□□□□□ -1.31
POLR2B-213ENST00000639658 KCNJ4P48050 445 aa6.87□□□□□ -1.31
POLR2B-213ENST00000639658 MVPQ14764 893 aaKnown RBP6.87□□□□□ -1.31
POLR2B-213ENST00000639658 UBXN6Q9BZV1 441 aa6.87□□□□□ -1.31
POLR2B-213ENST00000639658 CEP83Q9Y592 693 aa6.87□□□□□ -1.31
POLR2B-213ENST00000639658 PAXBP1Q9Y5B6 917 aa6.87□□□□□ -1.31
POLR2B-213ENST00000639658 EFCAB6Q5THR3 1501 aa6.87□□□□□ -1.31
POLR2B-213ENST00000639658 SSFA2P28290 1259 aa6.86□□□□□ -1.31
POLR2B-213ENST00000639658 NUCB1Q02818 461 aa6.86□□□□□ -1.31
POLR2B-213ENST00000639658 RABEP1Q15276 862 aa6.86□□□□□ -1.31
POLR2B-213ENST00000639658 ZNF771Q7L3S4 317 aaPredicted RBP6.86□□□□□ -1.31
POLR2B-213ENST00000639658 RBM28Q9NW13 759 aaKnown RBP6.86□□□□□ -1.31
POLR2B-213ENST00000639658 BCAR3O75815 825 aa6.86□□□□□ -1.31
POLR2B-213ENST00000639658 MYCNP04198 464 aaPredicted RBP6.86□□□□□ -1.31
POLR2B-213ENST00000639658 KIAA0556O60303 1618 aa6.86□□□□□ -1.31
POLR2B-213ENST00000639658 C9orf84Q5VXU9 1444 aa6.86□□□□□ -1.31
POLR2B-213ENST00000639658 GPATCH8Q9UKJ3 1502 aaKnown RBP6.86□□□□□ -1.31
POLR2B-213ENST00000639658 ATP8B1O43520 1251 aa6.86□□□□□ -1.31
POLR2B-213ENST00000639658 U2AF2P26368 475 aaKnown RBP eCLIP6.86□□□□□ -1.311e-7■■□□□ 11.7
POLR2B-213ENST00000639658 ATG3Q9NT62 314 aa6.86□□□□□ -1.31
POLR2B-213ENST00000639658 SWT1Q5T5J6 900 aaKnown RBP6.85□□□□□ -1.31
POLR2B-213ENST00000639658 CAVIN1Q6NZI2 390 aaKnown RBP6.85□□□□□ -1.31
POLR2B-213ENST00000639658 SMC4Q9NTJ3 1288 aa6.85□□□□□ -1.31
POLR2B-213ENST00000639658 PSD3Q9NYI0 1048 aa6.85□□□□□ -1.31
POLR2B-213ENST00000639658 TMEM63CQ9P1W3 806 aa6.85□□□□□ -1.31
POLR2B-213ENST00000639658 PPIP5K1Q6PFW1 1433 aa6.85□□□□□ -1.31
POLR2B-213ENST00000639658 URB2Q14146 1524 aaKnown RBP6.85□□□□□ -1.31
POLR2B-213ENST00000639658 TTC36A6NLP5 189 aa6.85□□□□□ -1.31
POLR2B-213ENST00000639658 CCDC172P0C7W6 258 aa6.85□□□□□ -1.31
POLR2B-213ENST00000639658 ZNF397Q8NF99 534 aaPredicted RBP6.85□□□□□ -1.31
POLR2B-213ENST00000639658 SYAP1Q96A49 352 aaPredicted RBP6.85□□□□□ -1.31
POLR2B-213ENST00000639658 SIRT1Q96EB6 747 aa6.85□□□□□ -1.31
POLR2B-213ENST00000639658 TSPY26PQ9H489 355 aa6.85□□□□□ -1.31
POLR2B-213ENST00000639658 DONSONQ9NYP3 566 aa6.85□□□□□ -1.31
POLR2B-213ENST00000639658 ERCC6Q03468 1493 aa6.85□□□□□ -1.31
POLR2B-213ENST00000639658 RIOK3O14730 519 aaKnown RBP6.84□□□□□ -1.31
POLR2B-213ENST00000639658 LMOD3Q0VAK6 560 aa6.84□□□□□ -1.31
POLR2B-213ENST00000639658 TROQ12816 1431 aaPredicted RBP6.84□□□□□ -1.31
POLR2B-213ENST00000639658 NBPF9Q3BBW0 867 aa6.84□□□□□ -1.31
POLR2B-213ENST00000639658 KIF24Q5T7B8 1368 aa6.84□□□□□ -1.31
POLR2B-213ENST00000639658 MNS1Q8NEH6 495 aa6.84□□□□□ -1.31
POLR2B-213ENST00000639658 ADAMTS12P58397 1594 aa6.84□□□□□ -1.31
POLR2B-213ENST00000639658 CDC42BPGQ6DT37 1551 aa6.84□□□□□ -1.31
POLR2B-213ENST00000639658 NUP153P49790 1475 aaKnown RBP6.84□□□□□ -1.31
POLR2B-213ENST00000639658 IFT140Q96RY7 1462 aa6.84□□□□□ -1.31
POLR2B-213ENST00000639658 RTL1A6NKG5 1358 aa6.84□□□□□ -1.31
POLR2B-213ENST00000639658 SBNO2Q9Y2G9 1366 aa6.84□□□□□ -1.31
POLR2B-213ENST00000639658 GUCY2CP25092 1073 aa6.84□□□□□ -1.31
POLR2B-213ENST00000639658 GSCP56915 257 aaPredicted RBP6.84□□□□□ -1.31
POLR2B-213ENST00000639658 CHAF1AQ13111 956 aaPredicted RBP6.84□□□□□ -1.31
POLR2B-213ENST00000639658 GAS2L2Q8NHY3 880 aa6.84□□□□□ -1.31
POLR2B-213ENST00000639658 MED4Q9NPJ6 270 aa6.84□□□□□ -1.31
POLR2B-213ENST00000639658 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.84□□□□□ -1.31
POLR2B-213ENST00000639658 IFT172Q9UG01 1749 aa6.84□□□□□ -1.31
POLR2B-213ENST00000639658 WDR43Q15061 677 aaKnown RBP eCLIP6.84□□□□□ -1.31
POLR2B-213ENST00000639658 NBPF10Q6P3W6 841 aaKnown RBP6.84□□□□□ -1.31
POLR2B-213ENST00000639658 PUS7Q96PZ0 661 aaKnown RBP6.84□□□□□ -1.31
POLR2B-213ENST00000639658 FUCA2Q9BTY2 467 aa6.84□□□□□ -1.31
POLR2B-213ENST00000639658 ASXL2Q76L83 1435 aa6.83□□□□□ -1.32
POLR2B-213ENST00000639658 SUGP1Q8IWZ8 645 aaKnown RBP6.83□□□□□ -1.32
POLR2B-213ENST00000639658 MSL3Q8N5Y2 521 aaKnown RBP6.83□□□□□ -1.32
POLR2B-213ENST00000639658 TACO1Q9BSH4 297 aaKnown RBP6.83□□□□□ -1.32
POLR2B-213ENST00000639658 ZBTB22O15209 634 aa6.83□□□□□ -1.32
POLR2B-213ENST00000639658 RPS6KA5O75582 802 aa6.83□□□□□ -1.32
POLR2B-213ENST00000639658 TMF1P82094 1093 aa6.83□□□□□ -1.32
POLR2B-213ENST00000639658 ZKSCAN8Q15776 578 aaPredicted RBP6.83□□□□□ -1.32
POLR2B-213ENST00000639658 SLC26A8Q96RN1 970 aa6.83□□□□□ -1.32
POLR2B-213ENST00000639658 ABCC11Q96J66 1382 aa6.83□□□□□ -1.32
POLR2B-213ENST00000639658 EPB41L2O43491 1005 aaKnown RBP6.83□□□□□ -1.32
POLR2B-213ENST00000639658 CPP00450 1065 aa6.83□□□□□ -1.32
POLR2B-213ENST00000639658 TRDNQ13061 729 aa6.83□□□□□ -1.32
POLR2B-213ENST00000639658 ICE2Q659A1 982 aa6.83□□□□□ -1.32
POLR2B-213ENST00000639658 ZDHHC9Q9Y397 364 aa6.83□□□□□ -1.32
POLR2B-213ENST00000639658 V9GYY5 206 aaPredicted RBP6.83□□□□□ -1.32
POLR2B-213ENST00000639658 ANKRD26Q9UPS8 1709 aa6.82□□□□□ -1.32
POLR2B-213ENST00000639658 TARBP1Q13395 1621 aaKnown RBP6.82□□□□□ -1.32
POLR2B-213ENST00000639658 KIF3CO14782 793 aa6.82□□□□□ -1.32
POLR2B-213ENST00000639658 TUBB4AP04350 444 aa6.82□□□□□ -1.32
POLR2B-213ENST00000639658 RAD51AP2Q09MP3 1159 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms