RNA–Protein interactions for RNA: ENST00000639128.1

RTTN-214, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 4,547 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-214ENST00000639128 GCKP35557 465 aa6.34□□□□□ -1.39
RTTN-214ENST00000639128 LRRC23Q53EV4 343 aaPredicted RBP6.34□□□□□ -1.39
RTTN-214ENST00000639128 ANKS4BQ8N8V4 417 aa6.34□□□□□ -1.39
RTTN-214ENST00000639128 PRDM10Q9NQV6 1147 aa6.34□□□□□ -1.39
RTTN-214ENST00000639128 MCM2P49736 904 aa6.34□□□□□ -1.39
RTTN-214ENST00000639128 IMMTQ16891 758 aaKnown RBP6.34□□□□□ -1.39
RTTN-214ENST00000639128 BTN2A1Q7KYR7 527 aa6.34□□□□□ -1.39
RTTN-214ENST00000639128 ARFGAP2Q8N6H7 521 aa6.34□□□□□ -1.39
RTTN-214ENST00000639128 SEC62Q99442 399 aaKnown RBP6.34□□□□□ -1.39
RTTN-214ENST00000639128 VCX3AQ9NNX9 186 aa6.34□□□□□ -1.39
RTTN-214ENST00000639128 DACH1Q9UI36 760 aa6.34□□□□□ -1.39
RTTN-214ENST00000639128 MAP4K4O95819 1239 aaPredicted RBP6.34□□□□□ -1.39
RTTN-214ENST00000639128 ERCC3P19447 782 aa6.34□□□□□ -1.39
RTTN-214ENST00000639128 CLCN1P35523 988 aa6.34□□□□□ -1.39
RTTN-214ENST00000639128 LACTBP83111 547 aaPredicted RBP6.34□□□□□ -1.39
RTTN-214ENST00000639128 MVPQ14764 893 aaKnown RBP6.34□□□□□ -1.39
RTTN-214ENST00000639128 ZKSCAN8Q15776 578 aaPredicted RBP6.34□□□□□ -1.39
RTTN-214ENST00000639128 PPP4R3BQ5MIZ7 849 aa6.34□□□□□ -1.39
RTTN-214ENST00000639128 OTUD6BQ8N6M0 293 aa6.34□□□□□ -1.39
RTTN-214ENST00000639128 CAPZA3Q96KX2 299 aa6.34□□□□□ -1.39
RTTN-214ENST00000639128 PAXBP1Q9Y5B6 917 aa6.34□□□□□ -1.39
RTTN-214ENST00000639128 NPM1P06748 294 aaKnown RBP eCLIP6.33□□□□□ -1.4
RTTN-214ENST00000639128 LMAN1P49257 510 aa6.33□□□□□ -1.4
RTTN-214ENST00000639128 LRRFIP1Q32MZ4 808 aaKnown RBP6.33□□□□□ -1.4
RTTN-214ENST00000639128 MICALL1Q8N3F8 863 aa6.33□□□□□ -1.4
RTTN-214ENST00000639128 TOMM22Q9NS69 142 aa6.33□□□□□ -1.4
RTTN-214ENST00000639128 CIZ1Q9ULV3 898 aaPredicted RBP6.33□□□□□ -1.4
RTTN-214ENST00000639128 CEP162Q5TB80 1403 aa6.33□□□□□ -1.4
RTTN-214ENST00000639128 LUC7L3O95232 432 aaKnown RBP6.33□□□□□ -1.4
RTTN-214ENST00000639128 NLRP5P59047 1200 aa6.33□□□□□ -1.4
RTTN-214ENST00000639128 ARMC9Q7Z3E5 817 aa6.33□□□□□ -1.4
RTTN-214ENST00000639128 CEP57Q86XR8 500 aa6.33□□□□□ -1.4
RTTN-214ENST00000639128 DZIP1LQ8IYY4 767 aaKnown RBP6.33□□□□□ -1.4
RTTN-214ENST00000639128 TTC14Q96N46 770 aa6.33□□□□□ -1.4
RTTN-214ENST00000639128 KIF5CO60282 957 aa6.33□□□□□ -1.4
RTTN-214ENST00000639128 CCDC172P0C7W6 258 aa6.33□□□□□ -1.4
RTTN-214ENST00000639128 CCDC192P0DO97 292 aa6.33□□□□□ -1.4
RTTN-214ENST00000639128 MAP3K9P80192 1104 aa6.33□□□□□ -1.4
RTTN-214ENST00000639128 B4GALNT4Q76KP1 1039 aa6.33□□□□□ -1.4
RTTN-214ENST00000639128 LARSQ9P2J5 1176 aaKnown RBP6.33□□□□□ -1.4
RTTN-214ENST00000639128 MKRN1Q9UHC7 482 aaKnown RBP6.33□□□□□ -1.4
RTTN-214ENST00000639128 ANAPC4Q9UJX5 808 aa6.33□□□□□ -1.4
RTTN-214ENST00000639128 ABCC9O60706 1549 aa6.33□□□□□ -1.4
RTTN-214ENST00000639128 CCDC121Q6ZUS5 278 aa6.33□□□□□ -1.4
RTTN-214ENST00000639128 RUFY3Q7L099 469 aa6.33□□□□□ -1.4
RTTN-214ENST00000639128 PHLDB2Q86SQ0 1253 aa6.33□□□□□ -1.4
RTTN-214ENST00000639128 IFT74Q96LB3 600 aa6.33□□□□□ -1.4
RTTN-214ENST00000639128 GIMAP4Q9NUV9 329 aa6.33□□□□□ -1.4
RTTN-214ENST00000639128 THEGQ9P2T0 379 aa6.33□□□□□ -1.4
RTTN-214ENST00000639128 MARCH6O60337 910 aa6.32□□□□□ -1.4
RTTN-214ENST00000639128 BUB1BO60566 1050 aaPredicted RBP6.32□□□□□ -1.4
RTTN-214ENST00000639128 PFDN1O60925 122 aa6.32□□□□□ -1.4
RTTN-214ENST00000639128 NEBLO76041 1014 aa6.32□□□□□ -1.4
RTTN-214ENST00000639128 TERF1P54274 439 aa6.32□□□□□ -1.4
RTTN-214ENST00000639128 IKQ13123 557 aaPredicted RBP6.32□□□□□ -1.4
RTTN-214ENST00000639128 PTPN14Q15678 1187 aa6.32□□□□□ -1.4
RTTN-214ENST00000639128 HSP90AA5PQ58FG0 334 aa6.32□□□□□ -1.4
RTTN-214ENST00000639128 TTC19Q6DKK2 380 aaPredicted RBP6.32□□□□□ -1.4
RTTN-214ENST00000639128 APLFQ8IW19 511 aaPredicted RBP6.32□□□□□ -1.4
RTTN-214ENST00000639128 ZNF280CQ8ND82 737 aa6.32□□□□□ -1.4
RTTN-214ENST00000639128 RSF1Q96T23 1441 aaPredicted RBP6.32□□□□□ -1.4
RTTN-214ENST00000639128 CENPJQ9HC77 1338 aaPredicted RBP6.32□□□□□ -1.4
RTTN-214ENST00000639128 SMC3Q9UQE7 1217 aa6.32□□□□□ -1.4
RTTN-214ENST00000639128 SPAG9O60271 1321 aaKnown RBP6.32□□□□□ -1.4
RTTN-214ENST00000639128 TEX2Q8IWB9 1127 aa6.32□□□□□ -1.4
RTTN-214ENST00000639128 PRPF31Q8WWY3 499 aaKnown RBP6.32□□□□□ -1.4
RTTN-214ENST00000639128 NAA15Q9BXJ9 866 aaKnown RBP6.32□□□□□ -1.4
RTTN-214ENST00000639128 EIF3AQ14152 1382 aaKnown RBP6.32□□□□□ -1.4
RTTN-214ENST00000639128 KIF4AO95239 1232 aa6.32□□□□□ -1.4
RTTN-214ENST00000639128 PDCP20941 246 aa6.32□□□□□ -1.4
RTTN-214ENST00000639128 SKIDA1Q1XH10 827 aa6.32□□□□□ -1.4
RTTN-214ENST00000639128 SMARCC2Q8TAQ2 1214 aa6.32□□□□□ -1.4
RTTN-214ENST00000639128 RUFY2Q8WXA3 655 aa6.32□□□□□ -1.4
RTTN-214ENST00000639128 RAI14Q9P0K7 980 aa6.32□□□□□ -1.4
RTTN-214ENST00000639128 CTAGE6Q86UF2 777 aa6.31□□□□□ -1.4
RTTN-214ENST00000639128 FBXW7Q969H0 707 aa6.31□□□□□ -1.4
RTTN-214ENST00000639128 SRRTQ9BXP5 876 aaKnown RBP6.31□□□□□ -1.4
RTTN-214ENST00000639128 DESP17661 470 aa6.31□□□□□ -1.4
RTTN-214ENST00000639128 ARHGAP25P42331 645 aa6.31□□□□□ -1.4
RTTN-214ENST00000639128 PPFIBP1Q86W92 1011 aa6.31□□□□□ -1.4
RTTN-214ENST00000639128 STMN4Q9H169 189 aaPredicted RBP6.31□□□□□ -1.4
RTTN-214ENST00000639128 ERC2O15083 957 aa6.31□□□□□ -1.4
RTTN-214ENST00000639128 SAFB2Q14151 953 aaKnown RBP eCLIP6.31□□□□□ -1.4
RTTN-214ENST00000639128 RPAP2Q8IXW5 612 aaPredicted RBP6.31□□□□□ -1.4
RTTN-214ENST00000639128 TRERF1Q96PN7 1200 aa6.31□□□□□ -1.4
RTTN-214ENST00000639128 ESF1Q9H501 851 aaKnown RBP6.31□□□□□ -1.4
RTTN-214ENST00000639128 OGFRQ9NZT2 677 aa6.31□□□□□ -1.4
RTTN-214ENST00000639128 CLIP2Q9UDT6 1046 aa6.31□□□□□ -1.4
RTTN-214ENST00000639128 POTEB3A0JP26 581 aa6.31□□□□□ -1.4
RTTN-214ENST00000639128 CTAGE9A4FU28 777 aa6.31□□□□□ -1.4
RTTN-214ENST00000639128 OPA1O60313 960 aa6.31□□□□□ -1.4
RTTN-214ENST00000639128 SKILP12757 684 aa6.31□□□□□ -1.4
RTTN-214ENST00000639128 ZKSCAN1P17029 563 aaPredicted RBP6.31□□□□□ -1.4
RTTN-214ENST00000639128 CETN2P41208 172 aa6.31□□□□□ -1.4
RTTN-214ENST00000639128 TRIM60Q495X7 471 aa6.31□□□□□ -1.4
RTTN-214ENST00000639128 HSP90AB4PQ58FF6 505 aa6.31□□□□□ -1.4
RTTN-214ENST00000639128 POTEBQ6S5H4 581 aa6.31□□□□□ -1.4
RTTN-214ENST00000639128 ALS2CR12Q96Q35 445 aa6.31□□□□□ -1.4
RTTN-214ENST00000639128 NINLQ9Y2I6 1382 aa6.3□□□□□ -1.4
RTTN-214ENST00000639128 CCDC196A0A1B0GTZ2 297 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms