RNA–Protein interactions for RNA: ENST00000638725.1

SNIP1-204, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 2

Gene SNIP1, Length 2,761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-204ENST00000638725 ZNF428Q96B54 188 aa13.61□□□□□ -0.23
SNIP1-204ENST00000638725 CDK19Q9BWU1 502 aa13.61□□□□□ -0.23
SNIP1-204ENST00000638725 ERBB4Q15303 1308 aa13.61□□□□□ -0.23
SNIP1-204ENST00000638725 CLTCQ00610 1675 aaKnown RBP13.61□□□□□ -0.23
SNIP1-204ENST00000638725 PTCH1Q13635 1447 aa13.61□□□□□ -0.23
SNIP1-204ENST00000638725 YTHDC2Q9H6S0 1430 aaKnown RBP13.61□□□□□ -0.23
SNIP1-204ENST00000638725 POLKQ9UBT6 870 aa13.6□□□□□ -0.23
SNIP1-204ENST00000638725 KIF20BQ96Q89 1820 aa13.6□□□□□ -0.23
SNIP1-204ENST00000638725 PIK3R4Q99570 1358 aa13.6□□□□□ -0.23
SNIP1-204ENST00000638725 NPM1P06748 294 aaKnown RBP eCLIP13.6□□□□□ -0.23
SNIP1-204ENST00000638725 NFE2L2Q16236 605 aa13.6□□□□□ -0.23
SNIP1-204ENST00000638725 GAS2L2Q8NHY3 880 aa13.6□□□□□ -0.23
SNIP1-204ENST00000638725 ESPNB1AK53 854 aa13.59□□□□□ -0.23
SNIP1-204ENST00000638725 SSFA2P28290 1259 aa13.59□□□□□ -0.23
SNIP1-204ENST00000638725 ARHGAP45Q92619 1136 aa13.59□□□□□ -0.23
SNIP1-204ENST00000638725 ARHGAP31Q2M1Z3 1444 aa13.58□□□□□ -0.24
SNIP1-204ENST00000638725 ABCC4O15439 1325 aa13.58□□□□□ -0.24
SNIP1-204ENST00000638725 SKOR2Q2VWA4 1001 aaPredicted RBP13.58□□□□□ -0.24
SNIP1-204ENST00000638725 CHMP4BQ9H444 224 aaKnown RBP13.58□□□□□ -0.24
SNIP1-204ENST00000638725 MBIPQ9NS73 344 aa13.58□□□□□ -0.24
SNIP1-204ENST00000638725 SLC52A1Q9NWF4 448 aa13.58□□□□□ -0.24
SNIP1-204ENST00000638725 ARHGEF40Q8TER5 1519 aa13.57□□□□□ -0.24
SNIP1-204ENST00000638725 DIP2CQ9Y2E4 1556 aa13.57□□□□□ -0.24
SNIP1-204ENST00000638725 CDC45O75419 566 aa13.57□□□□□ -0.24
SNIP1-204ENST00000638725 GSPT1P15170 499 aaKnown RBP13.57□□□□□ -0.24
SNIP1-204ENST00000638725 GNAI1P63096 354 aa13.57□□□□□ -0.24
SNIP1-204ENST00000638725 EMILIN1Q9Y6C2 1016 aa13.57□□□□□ -0.24
SNIP1-204ENST00000638725 TRIM44Q96DX7 344 aaPredicted RBP13.56□□□□□ -0.24
SNIP1-204ENST00000638725 IFT57Q9NWB7 429 aa13.56□□□□□ -0.24
SNIP1-204ENST00000638725 TMEM131LA2VDJ0 1609 aa13.56□□□□□ -0.24
SNIP1-204ENST00000638725 TWISTNBQ3B726 338 aaPredicted RBP13.56□□□□□ -0.24
SNIP1-204ENST00000638725 C8orf58Q8NAV2 365 aa13.55□□□□□ -0.24
SNIP1-204ENST00000638725 ZNF853P0CG23 659 aa13.55□□□□□ -0.24
SNIP1-204ENST00000638725 PTMSP20962 102 aa13.55□□□□□ -0.24
SNIP1-204ENST00000638725 CALD1Q05682 793 aaKnown RBP13.55□□□□□ -0.24
SNIP1-204ENST00000638725 PLEKHM2Q8IWE5 1019 aa13.54□□□□□ -0.24
SNIP1-204ENST00000638725 MAP2P11137 1827 aaKnown RBP13.54□□□□□ -0.24
SNIP1-204ENST00000638725 ALKQ9UM73 1620 aa13.54□□□□□ -0.24
SNIP1-204ENST00000638725 KNDC1Q76NI1 1749 aa13.53□□□□□ -0.24
SNIP1-204ENST00000638725 FAM83GA6ND36 823 aa13.53□□□□□ -0.24
SNIP1-204ENST00000638725 BAG4O95429 457 aaKnown RBP13.53□□□□□ -0.24
SNIP1-204ENST00000638725 IL13P35225 146 aa13.53□□□□□ -0.24
SNIP1-204ENST00000638725 PREX1Q8TCU6 1659 aa13.53□□□□□ -0.24
SNIP1-204ENST00000638725 GOLGA6L22H0YM25 854 aa13.53□□□□□ -0.24
SNIP1-204ENST00000638725 WAPLQ7Z5K2 1190 aa13.53□□□□□ -0.24
SNIP1-204ENST00000638725 API5Q9BZZ5 524 aaKnown RBP13.53□□□□□ -0.24
SNIP1-204ENST00000638725 DDX49Q9Y6V7 483 aaKnown RBP13.53□□□□□ -0.24
SNIP1-204ENST00000638725 REREQ9P2R6 1566 aa13.52□□□□□ -0.24
SNIP1-204ENST00000638725 FBXO31Q5XUX0 539 aaPredicted RBP13.52□□□□□ -0.24
SNIP1-204ENST00000638725 C16orf71Q8IYS4 520 aaPredicted RBP13.52□□□□□ -0.24
SNIP1-204ENST00000638725 ZRANB1Q9UGI0 708 aa13.52□□□□□ -0.24
SNIP1-204ENST00000638725 AK9Q5TCS8 1911 aa13.52□□□□□ -0.25
SNIP1-204ENST00000638725 DCTN1Q14203 1278 aa13.52□□□□□ -0.25
SNIP1-204ENST00000638725 CFAP44Q96MT7 982 aa13.52□□□□□ -0.25
SNIP1-204ENST00000638725 TTC22Q5TAA0 569 aa13.51□□□□□ -0.25
SNIP1-204ENST00000638725 CLEC17AQ6ZS10 378 aa13.51□□□□□ -0.25
SNIP1-204ENST00000638725 NME9Q86XW9 330 aa13.51□□□□□ -0.25
SNIP1-204ENST00000638725 YEATS2Q9ULM3 1422 aa13.51□□□□□ -0.25
SNIP1-204ENST00000638725 KLHL40Q2TBA0 621 aa13.51□□□□□ -0.25
SNIP1-204ENST00000638725 DCTPP1Q9H773 170 aa13.51□□□□□ -0.25
SNIP1-204ENST00000638725 ATP7BP35670 1465 aa13.51□□□□□ -0.25
SNIP1-204ENST00000638725 NASPP49321 788 aaPredicted RBP13.5□□□□□ -0.25
SNIP1-204ENST00000638725 RABEP1Q15276 862 aa13.5□□□□□ -0.25
SNIP1-204ENST00000638725 OTUD7AQ8TE49 926 aaPredicted RBP13.5□□□□□ -0.25
SNIP1-204ENST00000638725 RIMS2Q9UQ26 1411 aa13.5□□□□□ -0.25
SNIP1-204ENST00000638725 DLG5Q8TDM6 1919 aa13.5□□□□□ -0.25
SNIP1-204ENST00000638725 NEO1Q92859 1461 aa13.5□□□□□ -0.25
SNIP1-204ENST00000638725 CCDC173Q0VFZ6 552 aa13.49□□□□□ -0.25
SNIP1-204ENST00000638725 RRS1Q15050 365 aaKnown RBP13.49□□□□□ -0.25
SNIP1-204ENST00000638725 MCTP1Q6DN14 999 aa13.49□□□□□ -0.25
SNIP1-204ENST00000638725 USP26Q9BXU7 913 aa13.49□□□□□ -0.25
SNIP1-204ENST00000638725 LMOD3Q0VAK6 560 aa13.49□□□□□ -0.25
SNIP1-204ENST00000638725 PKP1Q13835 747 aa13.49□□□□□ -0.25
SNIP1-204ENST00000638725 STAG3Q9UJ98 1225 aa13.49□□□□□ -0.25
SNIP1-204ENST00000638725 CDK12Q9NYV4 1490 aaPredicted RBP13.48□□□□□ -0.25
SNIP1-204ENST00000638725 PPP1R9BQ96SB3 815 aa13.48□□□□□ -0.25
SNIP1-204ENST00000638725 KRT24Q2M2I5 525 aa13.48□□□□□ -0.25
SNIP1-204ENST00000638725 IBTKQ9P2D0 1353 aaPredicted RBP13.48□□□□□ -0.25
SNIP1-204ENST00000638725 ATP10DQ9P241 1426 aa13.48□□□□□ -0.25
SNIP1-204ENST00000638725 APBB1O00213 710 aa13.47□□□□□ -0.25
SNIP1-204ENST00000638725 SMARCA5O60264 1052 aaPredicted RBP13.47□□□□□ -0.25
SNIP1-204ENST00000638725 NCLP19338 710 aaKnown RBP13.47□□□□□ -0.25
SNIP1-204ENST00000638725 HSP90AA2PQ14568 343 aaPredicted RBP13.47□□□□□ -0.25
SNIP1-204ENST00000638725 KIF24Q5T7B8 1368 aa13.47□□□□□ -0.25
SNIP1-204ENST00000638725 CYP2E1P05181 493 aaPredicted RBP13.47□□□□□ -0.25
SNIP1-204ENST00000638725 INTS3Q68E01 1043 aaKnown RBP13.47□□□□□ -0.25
SNIP1-204ENST00000638725 ANKRD44Q8N8A2 993 aa13.47□□□□□ -0.25
SNIP1-204ENST00000638725 EDC4Q6P2E9 1401 aaKnown RBP13.46□□□□□ -0.25
SNIP1-204ENST00000638725 SDSP20132 328 aa13.46□□□□□ -0.25
SNIP1-204ENST00000638725 NUCB2P80303 420 aa13.46□□□□□ -0.25
SNIP1-204ENST00000638725 CAVIN1Q6NZI2 390 aaKnown RBP13.46□□□□□ -0.25
SNIP1-204ENST00000638725 RICTORQ6R327 1708 aa13.46□□□□□ -0.25
SNIP1-204ENST00000638725 LMBRD1Q9NUN5 540 aa13.46□□□□□ -0.26
SNIP1-204ENST00000638725 CPSF1Q10570 1443 aaKnown RBP13.46□□□□□ -0.26
SNIP1-204ENST00000638725 CEP85Q6P2H3 762 aa13.45□□□□□ -0.26
SNIP1-204ENST00000638725 ZGPATQ8N5A5 531 aaKnown RBP13.45□□□□□ -0.26
SNIP1-204ENST00000638725 RGS12O14924 1447 aa13.45□□□□□ -0.26
SNIP1-204ENST00000638725 NCKAP5LQ9HCH0 1330 aa13.45□□□□□ -0.26
SNIP1-204ENST00000638725 ANP32BQ92688 251 aaKnown RBP13.45□□□□□ -0.26
SNIP1-204ENST00000638725 MSH6P52701 1360 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms