RNA–Protein interactions for RNA: ENST00000638081.1

CHRNA7-234, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 692 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-234ENST00000638081 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.62■■□□□ 1.37
CHRNA7-234ENST00000638081 NFAT5O94916 1531 aa23.62■■□□□ 1.37
CHRNA7-234ENST00000638081 CD163L1Q9NR16 1453 aa23.61■■□□□ 1.37
CHRNA7-234ENST00000638081 DDB1Q16531 1140 aa23.6■■□□□ 1.37
CHRNA7-234ENST00000638081 OVOS2A0A0G2JMS6 1433 aa23.59■■□□□ 1.37
CHRNA7-234ENST00000638081 OVOS2A0A0J9YW53 1432 aa23.59■■□□□ 1.37
CHRNA7-234ENST00000638081 OVOS2Q6IE36 1432 aa23.59■■□□□ 1.37
CHRNA7-234ENST00000638081 LRRC37A3O60309 1634 aa23.59■■□□□ 1.37
CHRNA7-234ENST00000638081 MON2Q7Z3U7 1717 aa23.59■■□□□ 1.37
CHRNA7-234ENST00000638081 TMC1Q8TDI8 760 aa23.59■■□□□ 1.37
CHRNA7-234ENST00000638081 C11orf95C9JLR9 678 aaPredicted RBP23.58■■□□□ 1.37
CHRNA7-234ENST00000638081 CSB-PGBD3P0DP91 1061 aa23.58■■□□□ 1.37
CHRNA7-234ENST00000638081 USP31Q70CQ4 1352 aa23.57■■□□□ 1.36
CHRNA7-234ENST00000638081 NME9Q86XW9 330 aa23.57■■□□□ 1.36
CHRNA7-234ENST00000638081 CARD10Q9BWT7 1032 aa23.57■■□□□ 1.36
CHRNA7-234ENST00000638081 SLC12A5Q9H2X9 1139 aa23.57■■□□□ 1.36
CHRNA7-234ENST00000638081 PEAK1Q9H792 1746 aa23.56■■□□□ 1.36
CHRNA7-234ENST00000638081 RREB1Q92766 1687 aa23.56■■□□□ 1.36
CHRNA7-234ENST00000638081 HDGFL2Q7Z4V5 671 aaPredicted RBP23.55■■□□□ 1.36
CHRNA7-234ENST00000638081 CDCA7Q9BWT1 371 aaPredicted RBP23.55■■□□□ 1.36
CHRNA7-234ENST00000638081 RGPD5Q99666 1765 aa23.53■■□□□ 1.36
CHRNA7-234ENST00000638081 MARCH10Q8NA82 808 aaPredicted RBP23.53■■□□□ 1.36
CHRNA7-234ENST00000638081 ABCC6O95255 1503 aa23.53■■□□□ 1.36
CHRNA7-234ENST00000638081 EDC4Q6P2E9 1401 aaKnown RBP23.52■■□□□ 1.36
CHRNA7-234ENST00000638081 NUP188Q5SRE5 1749 aa23.52■■□□□ 1.36
CHRNA7-234ENST00000638081 WNK3Q9BYP7 1800 aa23.52■■□□□ 1.36
CHRNA7-234ENST00000638081 A0A1W2PP64 1363 aa23.52■■□□□ 1.36
CHRNA7-234ENST00000638081 NBPF14Q5TI25 921 aa23.51■■□□□ 1.35
CHRNA7-234ENST00000638081 PTF1AQ7RTS3 328 aa23.51■■□□□ 1.35
CHRNA7-234ENST00000638081 PUS7Q96PZ0 661 aaKnown RBP23.51■■□□□ 1.35
CHRNA7-234ENST00000638081 TESK2Q96S53 571 aa23.51■■□□□ 1.35
CHRNA7-234ENST00000638081 TERF2IPQ9NYB0 399 aa23.51■■□□□ 1.35
CHRNA7-234ENST00000638081 USP54Q70EL1 1684 aa23.51■■□□□ 1.35
CHRNA7-234ENST00000638081 TRIM26Q12899 539 aaPredicted RBP23.5■■□□□ 1.35
CHRNA7-234ENST00000638081 CCDC7Q96M83 1385 aa23.5■■□□□ 1.35
CHRNA7-234ENST00000638081 ST20-MTHFSA0A0A6YYL1 179 aa23.49■■□□□ 1.35
CHRNA7-234ENST00000638081 BCL11BQ9C0K0 894 aaPredicted RBP23.49■■□□□ 1.35
CHRNA7-234ENST00000638081 BCL9O00512 1426 aa23.49■■□□□ 1.35
CHRNA7-234ENST00000638081 ERBB3P21860 1342 aa23.48■■□□□ 1.35
CHRNA7-234ENST00000638081 PLSCR1O15162 318 aa23.47■■□□□ 1.35
CHRNA7-234ENST00000638081 EXOC5O00471 708 aa23.46■■□□□ 1.35
CHRNA7-234ENST00000638081 SBF2Q86WG5 1849 aa23.46■■□□□ 1.35
CHRNA7-234ENST00000638081 NLRP2Q9NX02 1062 aa23.45■■□□□ 1.34
CHRNA7-234ENST00000638081 TNS2Q63HR2 1409 aa23.44■■□□□ 1.34
CHRNA7-234ENST00000638081 NINLQ9Y2I6 1382 aa23.44■■□□□ 1.34
CHRNA7-234ENST00000638081 ANKRD24Q8TF21 1146 aa23.43■■□□□ 1.34
CHRNA7-234ENST00000638081 RGPD3A6NKT7 1758 aaPredicted RBP23.42■■□□□ 1.34
CHRNA7-234ENST00000638081 RGPD4Q7Z3J3 1758 aa23.42■■□□□ 1.34
CHRNA7-234ENST00000638081 LTN1O94822 1766 aa23.42■■□□□ 1.34
CHRNA7-234ENST00000638081 ANO8Q9HCE9 1232 aaPredicted RBP23.41■■□□□ 1.34
CHRNA7-234ENST00000638081 SLC24A1O60721 1099 aa23.4■■□□□ 1.34
CHRNA7-234ENST00000638081 PROM2Q8N271 834 aa23.4■■□□□ 1.34
CHRNA7-234ENST00000638081 IL2RBP14784 551 aa23.39■■□□□ 1.33
CHRNA7-234ENST00000638081 KCNQ2O43526 872 aa23.38■■□□□ 1.33
CHRNA7-234ENST00000638081 IP6K1Q92551 441 aa23.37■■□□□ 1.33
CHRNA7-234ENST00000638081 USP47Q96K76 1375 aa23.37■■□□□ 1.33
CHRNA7-234ENST00000638081 COG3Q96JB2 828 aa23.36■■□□□ 1.33
CHRNA7-234ENST00000638081 ANKRD36BQ8N2N9 1353 aa23.36■■□□□ 1.33
CHRNA7-234ENST00000638081 SPON1Q9HCB6 807 aa23.35■■□□□ 1.33
CHRNA7-234ENST00000638081 TXNRD1Q16881 649 aa23.34■■□□□ 1.33
CHRNA7-234ENST00000638081 LTV1Q96GA3 475 aaPredicted RBP23.34■■□□□ 1.33
CHRNA7-234ENST00000638081 ACSBG1Q96GR2 724 aa23.34■■□□□ 1.33
CHRNA7-234ENST00000638081 MAP3K19Q56UN5 1328 aa23.33■■□□□ 1.33
CHRNA7-234ENST00000638081 FBLN1P23142 703 aa23.33■■□□□ 1.33
CHRNA7-234ENST00000638081 TMF1P82094 1093 aa23.33■■□□□ 1.33
CHRNA7-234ENST00000638081 PDGFDQ9GZP0 370 aaPredicted RBP23.31■■□□□ 1.32
CHRNA7-234ENST00000638081 NHSQ6T4R5 1651 aa23.31■■□□□ 1.32
CHRNA7-234ENST00000638081 HOXC9P31274 260 aa23.3■■□□□ 1.32
CHRNA7-234ENST00000638081 PPP1R1BQ9UD71 204 aaPredicted RBP23.3■■□□□ 1.32
CHRNA7-234ENST00000638081 AMPHP49418 695 aa23.29■■□□□ 1.32
CHRNA7-234ENST00000638081 CASZ1Q86V15 1759 aa23.27■■□□□ 1.32
CHRNA7-234ENST00000638081 FYB1O15117 783 aa23.27■■□□□ 1.32
CHRNA7-234ENST00000638081 GGNBP2Q9H3C7 697 aa23.27■■□□□ 1.32
CHRNA7-234ENST00000638081 STK32BQ9NY57 414 aa23.27■■□□□ 1.32
CHRNA7-234ENST00000638081 SLC15A2Q16348 729 aa23.26■■□□□ 1.31
CHRNA7-234ENST00000638081 FAM208AQ9UK61 1670 aaKnown RBP23.25■■□□□ 1.31
CHRNA7-234ENST00000638081 ZBTB7AO95365 584 aa23.25■■□□□ 1.31
CHRNA7-234ENST00000638081 RRS1Q15050 365 aaKnown RBP23.25■■□□□ 1.31
CHRNA7-234ENST00000638081 DDX54Q8TDD1 881 aaKnown RBP23.25■■□□□ 1.31
CHRNA7-234ENST00000638081 CDCA8Q53HL2 280 aa23.24■■□□□ 1.31
CHRNA7-234ENST00000638081 RTL1A6NKG5 1358 aa23.24■■□□□ 1.31
CHRNA7-234ENST00000638081 BTAF1O14981 1849 aa23.21■■□□□ 1.31
CHRNA7-234ENST00000638081 PTGER2P43116 358 aa23.2■■□□□ 1.3
CHRNA7-234ENST00000638081 TIMELESSQ9UNS1 1208 aa23.2■■□□□ 1.3
CHRNA7-234ENST00000638081 ATF5Q9Y2D1 282 aaPredicted RBP23.2■■□□□ 1.3
CHRNA7-234ENST00000638081 MEGF6O75095 1541 aa23.19■■□□□ 1.3
CHRNA7-234ENST00000638081 NBPF6Q5VWK0 638 aa23.19■■□□□ 1.3
CHRNA7-234ENST00000638081 NBPF4Q96M43 638 aa23.19■■□□□ 1.3
CHRNA7-234ENST00000638081 LRRC4BQ9NT99 713 aa23.19■■□□□ 1.3
CHRNA7-234ENST00000638081 PAPPAQ13219 1627 aa23.19■■□□□ 1.3
CHRNA7-234ENST00000638081 ZCRB1Q8TBF4 217 aaKnown RBP23.18■■□□□ 1.3
CHRNA7-234ENST00000638081 CARD14Q9BXL6 1004 aa23.18■■□□□ 1.3
CHRNA7-234ENST00000638081 USHBP1Q8N6Y0 703 aa23.17■■□□□ 1.3
CHRNA7-234ENST00000638081 PCGF6Q9BYE7 350 aa23.17■■□□□ 1.3
CHRNA7-234ENST00000638081 RGPD2P0DJD1 1756 aa23.17■■□□□ 1.3
CHRNA7-234ENST00000638081 CLSPNQ9HAW4 1339 aa23.16■■□□□ 1.3
CHRNA7-234ENST00000638081 PRIM1P49642 420 aaKnown RBP23.16■■□□□ 1.3
CHRNA7-234ENST00000638081 ZNF827Q17R98 1081 aa23.16■■□□□ 1.3
CHRNA7-234ENST00000638081 SYTL4Q96C24 671 aaPredicted RBP23.16■■□□□ 1.3
CHRNA7-234ENST00000638081 SMG6Q86US8 1419 aaKnown RBP23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms