RNA–Protein interactions for RNA: ENST00000637007.1

CACNB4-240, Transcript of calcium voltage-gated channel auxiliary subunit beta 4, human

TSL 5

Gene CACNB4, Length 858 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNB4-240	ENST00000637007	SLAIN2	Q9P270	581 aa		11.31	□□□□□ -0.6
CACNB4-240	ENST00000637007	IQSEC2	Q5JU85	1478 aa		11.31	□□□□□ -0.6
CACNB4-240	ENST00000637007	LTN1	O94822	1766 aa		11.31	□□□□□ -0.6
CACNB4-240	ENST00000637007	SHPRH	Q149N8	1683 aa		11.3	□□□□□ -0.6
CACNB4-240	ENST00000637007	ROBO1	Q9Y6N7	1651 aa		11.3	□□□□□ -0.6
CACNB4-240	ENST00000637007	SBNO1	A3KN83	1393 aa		11.3	□□□□□ -0.6
CACNB4-240	ENST00000637007	SMG6	Q86US8	1419 aa	Known RBP	11.3	□□□□□ -0.6
CACNB4-240	ENST00000637007	KRT28	Q7Z3Y7	464 aa		11.3	□□□□□ -0.6
CACNB4-240	ENST00000637007	FAM9B	Q8IZU0	186 aa		11.3	□□□□□ -0.6
CACNB4-240	ENST00000637007	ABTB2	Q8N961	1025 aa		11.3	□□□□□ -0.6
CACNB4-240	ENST00000637007	PXDN	Q92626	1479 aa		11.3	□□□□□ -0.6
CACNB4-240	ENST00000637007	CDK12	Q9NYV4	1490 aa	Predicted RBP	11.3	□□□□□ -0.6
CACNB4-240	ENST00000637007	TNS3	Q68CZ2	1445 aa		11.29	□□□□□ -0.6
CACNB4-240	ENST00000637007	NLRP6	P59044	892 aa		11.29	□□□□□ -0.6
CACNB4-240	ENST00000637007	WDR43	Q15061	677 aa	Known RBP eCLIP	11.29	□□□□□ -0.6
CACNB4-240	ENST00000637007	BRINP3	Q76B58	766 aa		11.29	□□□□□ -0.6
CACNB4-240	ENST00000637007	PHRF1	Q9P1Y6	1649 aa	Known RBP	11.28	□□□□□ -0.6
CACNB4-240	ENST00000637007	MTHFS	P49914	203 aa		11.28	□□□□□ -0.6
CACNB4-240	ENST00000637007	XPC	Q01831	940 aa	Predicted RBP	11.28	□□□□□ -0.6
CACNB4-240	ENST00000637007	PNISR	Q8TF01	805 aa	Known RBP	11.28	□□□□□ -0.6
CACNB4-240	ENST00000637007	AHDC1	Q5TGY3	1603 aa	Predicted RBP	11.27	□□□□□ -0.6
CACNB4-240	ENST00000637007	SLIT3	O75094	1523 aa		11.27	□□□□□ -0.61
CACNB4-240	ENST00000637007	LMOD2	Q6P5Q4	547 aa		11.27	□□□□□ -0.61
CACNB4-240	ENST00000637007	MED1	Q15648	1581 aa	Predicted RBP	11.27	□□□□□ -0.61
CACNB4-240	ENST00000637007	ARHGEF10	O15013	1369 aa		11.27	□□□□□ -0.61
CACNB4-240	ENST00000637007	INSR	P06213	1382 aa		11.27	□□□□□ -0.61
CACNB4-240	ENST00000637007	COL3A1	P02461	1466 aa	Predicted RBP	11.26	□□□□□ -0.61
CACNB4-240	ENST00000637007	NUTM2G	Q5VZR2	741 aa		11.26	□□□□□ -0.61
CACNB4-240	ENST00000637007	NUDC	Q9Y266	331 aa		11.26	□□□□□ -0.61
CACNB4-240	ENST00000637007	PHLPP1	O60346	1717 aa		11.26	□□□□□ -0.61
CACNB4-240	ENST00000637007	PEAK1	Q9H792	1746 aa		11.26	□□□□□ -0.61
CACNB4-240	ENST00000637007	CRYBG1	Q9Y4K1	1723 aa		11.26	□□□□□ -0.61
CACNB4-240	ENST00000637007	NFAT5	O94916	1531 aa		11.25	□□□□□ -0.61
CACNB4-240	ENST00000637007	TOM1	O60784	492 aa		11.25	□□□□□ -0.61
CACNB4-240	ENST00000637007	KCNH5	Q8NCM2	988 aa		11.25	□□□□□ -0.61
CACNB4-240	ENST00000637007	POLK	Q9UBT6	870 aa		11.25	□□□□□ -0.61
CACNB4-240	ENST00000637007	ABCA3	Q99758	1704 aa		11.25	□□□□□ -0.61
CACNB4-240	ENST00000637007	BLM	P54132	1417 aa	Predicted RBP	11.25	□□□□□ -0.61
CACNB4-240	ENST00000637007	PPM1G	O15355	546 aa	Predicted RBP	11.24	□□□□□ -0.61
CACNB4-240	ENST00000637007	SOX12	O15370	315 aa		11.24	□□□□□ -0.61
CACNB4-240	ENST00000637007	CENPB	P07199	599 aa	Predicted RBP	11.24	□□□□□ -0.61
CACNB4-240	ENST00000637007	EMILIN1	Q9Y6C2	1016 aa		11.24	□□□□□ -0.61
CACNB4-240	ENST00000637007	USP19	O94966	1318 aa		11.24	□□□□□ -0.61
CACNB4-240	ENST00000637007	RTL1	A6NKG5	1358 aa		11.24	□□□□□ -0.61
CACNB4-240	ENST00000637007	KIF24	Q5T7B8	1368 aa		11.24	□□□□□ -0.61
CACNB4-240	ENST00000637007	HNRNPU	Q00839	825 aa	Known RBP eCLIP	11.23	□□□□□ -0.61
CACNB4-240	ENST00000637007	RRS1	Q15050	365 aa	Known RBP	11.23	□□□□□ -0.61
CACNB4-240	ENST00000637007	DDX17	Q92841	729 aa	Known RBP	11.23	□□□□□ -0.61
CACNB4-240	ENST00000637007	SOS2	Q07890	1332 aa	Predicted RBP	11.23	□□□□□ -0.61
CACNB4-240	ENST00000637007	SPATA31A3	Q5VYP0	1347 aa		11.23	□□□□□ -0.61
CACNB4-240	ENST00000637007	FLT4	P35916	1363 aa		11.23	□□□□□ -0.61
CACNB4-240	ENST00000637007	PNPLA6	Q8IY17	1366 aa		11.23	□□□□□ -0.61
CACNB4-240	ENST00000637007	DIAPH1	O60610	1272 aa	Known RBP	11.22	□□□□□ -0.61
CACNB4-240	ENST00000637007	AMPH	P49418	695 aa		11.22	□□□□□ -0.61
CACNB4-240	ENST00000637007	ABCC6	O95255	1503 aa		11.21	□□□□□ -0.61
CACNB4-240	ENST00000637007	MAP3K19	Q56UN5	1328 aa		11.21	□□□□□ -0.61
CACNB4-240	ENST00000637007	UBAP1L	F5GYI3	381 aa		11.21	□□□□□ -0.61
CACNB4-240	ENST00000637007	FBLN1	P23142	703 aa		11.21	□□□□□ -0.61
CACNB4-240	ENST00000637007	U2SURP	O15042	1029 aa	Known RBP	11.2	□□□□□ -0.62
CACNB4-240	ENST00000637007	U2AF1L5	P0DN76	240 aa	Predicted RBP	11.2	□□□□□ -0.62
CACNB4-240	ENST00000637007	U2AF1	Q01081	240 aa	Known RBP eCLIP	11.2	□□□□□ -0.62
CACNB4-240	ENST00000637007	RGPD5	Q99666	1765 aa		11.2	□□□□□ -0.62
CACNB4-240	ENST00000637007	COL16A1	Q07092	1604 aa	Predicted RBP	11.2	□□□□□ -0.62
CACNB4-240	ENST00000637007	COL22A1	Q8NFW1	1626 aa	Predicted RBP	11.2	□□□□□ -0.62
CACNB4-240	ENST00000637007	RGPD1	P0DJD0	1748 aa		11.19	□□□□□ -0.62
CACNB4-240	ENST00000637007	ZBTB7C	A1YPR0	619 aa		11.19	□□□□□ -0.62
CACNB4-240	ENST00000637007	PLEKHG5	O94827	1062 aa		11.19	□□□□□ -0.62
CACNB4-240	ENST00000637007	CERK	Q8TCT0	537 aa		11.19	□□□□□ -0.62
CACNB4-240	ENST00000637007	PNN	Q9H307	717 aa	Known RBP	11.19	□□□□□ -0.62
CACNB4-240	ENST00000637007	ADAMTS8	Q9UP79	889 aa		11.19	□□□□□ -0.62
CACNB4-240	ENST00000637007	FAM208A	Q9UK61	1670 aa	Known RBP	11.19	□□□□□ -0.62
CACNB4-240	ENST00000637007	ZBED9	Q6R2W3	1325 aa		11.18	□□□□□ -0.62
CACNB4-240	ENST00000637007	GC	P02774	474 aa		11.18	□□□□□ -0.62
CACNB4-240	ENST00000637007	HAP1	P54257	671 aa	Predicted RBP	11.18	□□□□□ -0.62
CACNB4-240	ENST00000637007	NEFM	P07197	916 aa		11.17	□□□□□ -0.62
CACNB4-240	ENST00000637007	PIP4K2B	P78356	416 aa		11.17	□□□□□ -0.62
CACNB4-240	ENST00000637007	MAMSTR	Q6ZN01	415 aa		11.17	□□□□□ -0.62
CACNB4-240	ENST00000637007	LRRC59	Q96AG4	307 aa	Known RBP	11.17	□□□□□ -0.62
CACNB4-240	ENST00000637007	COL18A1	P39060	1754 aa		11.16	□□□□□ -0.62
CACNB4-240	ENST00000637007	MAPK8IP3	Q9UPT6	1336 aa		11.16	□□□□□ -0.62
CACNB4-240	ENST00000637007	HOXC9	P31274	260 aa		11.16	□□□□□ -0.62
CACNB4-240	ENST00000637007	IL13	P35225	146 aa		11.16	□□□□□ -0.62
CACNB4-240	ENST00000637007	EIF4A2	Q14240	407 aa	Known RBP	11.16	□□□□□ -0.62
CACNB4-240	ENST00000637007	PELP1	Q8IZL8	1130 aa	Known RBP	11.16	□□□□□ -0.62
CACNB4-240	ENST00000637007	IP6K1	Q92551	441 aa		11.16	□□□□□ -0.62
CACNB4-240	ENST00000637007	RUNDC1	Q96C34	613 aa		11.16	□□□□□ -0.62
CACNB4-240	ENST00000637007	RGPD2	P0DJD1	1756 aa		11.16	□□□□□ -0.62
CACNB4-240	ENST00000637007	CPD	O75976	1380 aa		11.16	□□□□□ -0.62
CACNB4-240	ENST00000637007	HSP90AB2P	Q58FF8	381 aa		11.15	□□□□□ -0.62
CACNB4-240	ENST00000637007	ARHGEF25	Q86VW2	580 aa		11.15	□□□□□ -0.62
CACNB4-240	ENST00000637007	CCDC146	Q8IYE0	955 aa		11.15	□□□□□ -0.62
CACNB4-240	ENST00000637007	CAMTA1	Q9Y6Y1	1673 aa		11.14	□□□□□ -0.63
CACNB4-240	ENST00000637007	LCE2D	Q5TA82	110 aa	Predicted RBP	11.14	□□□□□ -0.63
CACNB4-240	ENST00000637007	NGEF	Q8N5V2	710 aa		11.14	□□□□□ -0.63
CACNB4-240	ENST00000637007	CREBZF	Q9NS37	354 aa		11.14	□□□□□ -0.63
CACNB4-240	ENST00000637007	DLG5	Q8TDM6	1919 aa		11.13	□□□□□ -0.63
CACNB4-240	ENST00000637007	COL14A1	Q05707	1796 aa	Known RBP	11.13	□□□□□ -0.63
CACNB4-240	ENST00000637007	FCHSD2	O94868	740 aa		11.13	□□□□□ -0.63
CACNB4-240	ENST00000637007	ZC3H6	P61129	1189 aa	Known RBP	11.13	□□□□□ -0.63
CACNB4-240	ENST00000637007	CABLES1	Q8TDN4	633 aa		11.13	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms