RNA–Protein interactions for RNA: ENST00000636850.1

CHRNA7-220, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 916 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-220ENST00000636850 ABCC6O95255 1503 aa28.74■■■□□ 2.19
CHRNA7-220ENST00000636850 WNK3Q9BYP7 1800 aa28.71■■■□□ 2.19
CHRNA7-220ENST00000636850 EIF4G2P78344 907 aaKnown RBP eCLIP28.71■■■□□ 2.19
CHRNA7-220ENST00000636850 LARP1Q6PKG0 1096 aaKnown RBP28.71■■■□□ 2.19
CHRNA7-220ENST00000636850 ARHGEF25Q86VW2 580 aa28.71■■■□□ 2.19
CHRNA7-220ENST00000636850 KRT27Q7Z3Y8 459 aa28.69■■■□□ 2.18
CHRNA7-220ENST00000636850 USP35Q9P2H5 1018 aa28.69■■■□□ 2.18
CHRNA7-220ENST00000636850 CRB1P82279 1406 aa28.69■■■□□ 2.18
CHRNA7-220ENST00000636850 HSPA5P11021 654 aaKnown RBP28.68■■■□□ 2.18
CHRNA7-220ENST00000636850 PARP4Q9UKK3 1724 aaKnown RBP28.66■■■□□ 2.18
CHRNA7-220ENST00000636850 AXIN2Q9Y2T1 843 aa28.64■■■□□ 2.18
CHRNA7-220ENST00000636850 BARGINQ6ZT62 677 aa28.63■■■□□ 2.17
CHRNA7-220ENST00000636850 TCP11L2Q8N4U5 519 aa28.63■■■□□ 2.17
CHRNA7-220ENST00000636850 COG3Q96JB2 828 aa28.61■■■□□ 2.17
CHRNA7-220ENST00000636850 WDR17Q8IZU2 1322 aa28.61■■■□□ 2.17
CHRNA7-220ENST00000636850 THRAP3Q9Y2W1 955 aaKnown RBP28.6■■■□□ 2.17
CHRNA7-220ENST00000636850 BLMP54132 1417 aaPredicted RBP28.6■■■□□ 2.17
CHRNA7-220ENST00000636850 LRRC37A3O60309 1634 aa28.59■■■□□ 2.17
CHRNA7-220ENST00000636850 TOM1L2Q6ZVM7 507 aa28.59■■■□□ 2.17
CHRNA7-220ENST00000636850 POLR3GLQ9BT43 218 aa28.59■■■□□ 2.17
CHRNA7-220ENST00000636850 RGPD1P0DJD0 1748 aa28.59■■■□□ 2.17
CHRNA7-220ENST00000636850 NSD3Q9BZ95 1437 aa28.59■■■□□ 2.17
CHRNA7-220ENST00000636850 CCDC125Q86Z20 511 aa28.58■■■□□ 2.17
CHRNA7-220ENST00000636850 CSB-PGBD3P0DP91 1061 aa28.56■■■□□ 2.16
CHRNA7-220ENST00000636850 FAM208AQ9UK61 1670 aaKnown RBP28.56■■■□□ 2.16
CHRNA7-220ENST00000636850 FYB1O15117 783 aa28.54■■■□□ 2.16
CHRNA7-220ENST00000636850 GGNBP2Q9H3C7 697 aa28.54■■■□□ 2.16
CHRNA7-220ENST00000636850 TNS1Q9HBL0 1735 aaKnown RBP28.54■■■□□ 2.16
CHRNA7-220ENST00000636850 ANKRD26Q9UPS8 1709 aa28.53■■■□□ 2.16
CHRNA7-220ENST00000636850 FAM182BQ5T319 152 aa28.53■■■□□ 2.16
CHRNA7-220ENST00000636850 CARD14Q9BXL6 1004 aa28.53■■■□□ 2.16
CHRNA7-220ENST00000636850 ERBB3P21860 1342 aa28.52■■■□□ 2.16
CHRNA7-220ENST00000636850 CARD10Q9BWT7 1032 aa28.5■■■□□ 2.15
CHRNA7-220ENST00000636850 PDE3BQ13370 1112 aa28.49■■■□□ 2.15
CHRNA7-220ENST00000636850 SF3B2Q13435 895 aaKnown RBP28.49■■■□□ 2.15
CHRNA7-220ENST00000636850 CCDC7Q96M83 1385 aa28.49■■■□□ 2.15
CHRNA7-220ENST00000636850 MAP3K19Q56UN5 1328 aa28.48■■■□□ 2.15
CHRNA7-220ENST00000636850 ANKRD24Q8TF21 1146 aa28.47■■■□□ 2.15
CHRNA7-220ENST00000636850 RGPD2P0DJD1 1756 aa28.47■■■□□ 2.15
CHRNA7-220ENST00000636850 PEAK1Q9H792 1746 aa28.46■■■□□ 2.15
CHRNA7-220ENST00000636850 DISP2A7MBM2 1401 aa28.46■■■□□ 2.15
CHRNA7-220ENST00000636850 IP6K1Q92551 441 aa28.46■■■□□ 2.15
CHRNA7-220ENST00000636850 RTL1A6NKG5 1358 aa28.46■■■□□ 2.15
CHRNA7-220ENST00000636850 FBLN1P23142 703 aa28.45■■■□□ 2.14
CHRNA7-220ENST00000636850 CGNL1Q0VF96 1302 aa28.44■■■□□ 2.14
CHRNA7-220ENST00000636850 FAM196AQ6ZSG2 479 aa28.44■■■□□ 2.14
CHRNA7-220ENST00000636850 CDCA7Q9BWT1 371 aaPredicted RBP28.44■■■□□ 2.14
CHRNA7-220ENST00000636850 SBF2Q86WG5 1849 aa28.43■■■□□ 2.14
CHRNA7-220ENST00000636850 C11orf95C9JLR9 678 aaPredicted RBP28.43■■■□□ 2.14
CHRNA7-220ENST00000636850 AMPHP49418 695 aa28.43■■■□□ 2.14
CHRNA7-220ENST00000636850 NLRP2Q9NX02 1062 aa28.43■■■□□ 2.14
CHRNA7-220ENST00000636850 MAP2P11137 1827 aaKnown RBP28.42■■■□□ 2.14
CHRNA7-220ENST00000636850 HOXC9P31274 260 aa28.42■■■□□ 2.14
CHRNA7-220ENST00000636850 RRS1Q15050 365 aaKnown RBP28.42■■■□□ 2.14
CHRNA7-220ENST00000636850 DDB1Q16531 1140 aa28.42■■■□□ 2.14
CHRNA7-220ENST00000636850 DEFB132Q7Z7B7 95 aa28.42■■■□□ 2.14
CHRNA7-220ENST00000636850 OVOS2A0A0G2JMS6 1433 aa28.41■■■□□ 2.14
CHRNA7-220ENST00000636850 TNS2Q63HR2 1409 aa28.39■■■□□ 2.14
CHRNA7-220ENST00000636850 LTV1Q96GA3 475 aaPredicted RBP28.39■■■□□ 2.14
CHRNA7-220ENST00000636850 PANK3Q9H999 370 aa28.38■■■□□ 2.13
CHRNA7-220ENST00000636850 KIF7Q2M1P5 1343 aa28.38■■■□□ 2.13
CHRNA7-220ENST00000636850 BAG6P46379 1132 aa28.37■■■□□ 2.13
CHRNA7-220ENST00000636850 TRIM37O94972 964 aa28.36■■■□□ 2.13
CHRNA7-220ENST00000636850 FLT4P35916 1363 aa28.35■■■□□ 2.13
CHRNA7-220ENST00000636850 KIF24Q5T7B8 1368 aa28.35■■■□□ 2.13
CHRNA7-220ENST00000636850 SMG6Q86US8 1419 aaKnown RBP28.35■■■□□ 2.13
CHRNA7-220ENST00000636850 IL2RBP14784 551 aa28.32■■■□□ 2.12
CHRNA7-220ENST00000636850 NSD2O96028 1365 aa28.31■■■□□ 2.12
CHRNA7-220ENST00000636850 INSRP06213 1382 aa28.31■■■□□ 2.12
CHRNA7-220ENST00000636850 EXOC5O00471 708 aa28.3■■■□□ 2.12
CHRNA7-220ENST00000636850 MARCH10Q8NA82 808 aaPredicted RBP28.29■■■□□ 2.12
CHRNA7-220ENST00000636850 EMILIN1Q9Y6C2 1016 aa28.29■■■□□ 2.12
CHRNA7-220ENST00000636850 RREB1Q92766 1687 aa28.29■■■□□ 2.12
CHRNA7-220ENST00000636850 EN1Q05925 392 aaPredicted RBP28.28■■■□□ 2.12
CHRNA7-220ENST00000636850 SHANK3Q9BYB0 1731 aa28.28■■■□□ 2.12
CHRNA7-220ENST00000636850 KAT6BQ8WYB5 2073 aa28.28■■■□□ 2.12
CHRNA7-220ENST00000636850 BCL9O00512 1426 aa28.27■■■□□ 2.12
CHRNA7-220ENST00000636850 RGPD3A6NKT7 1758 aaPredicted RBP28.27■■■□□ 2.12
CHRNA7-220ENST00000636850 RGPD4Q7Z3J3 1758 aa28.27■■■□□ 2.12
CHRNA7-220ENST00000636850 HSP90AB2PQ58FF8 381 aa28.27■■■□□ 2.12
CHRNA7-220ENST00000636850 NHSQ6T4R5 1651 aa28.26■■■□□ 2.11
CHRNA7-220ENST00000636850 PPM1GO15355 546 aaPredicted RBP28.25■■■□□ 2.11
CHRNA7-220ENST00000636850 APBA3O96018 575 aa28.25■■■□□ 2.11
CHRNA7-220ENST00000636850 MEGF6O75095 1541 aa28.24■■■□□ 2.11
CHRNA7-220ENST00000636850 KNSTRNQ9Y448 316 aa28.24■■■□□ 2.11
CHRNA7-220ENST00000636850 NUP188Q5SRE5 1749 aa28.23■■■□□ 2.11
CHRNA7-220ENST00000636850 TNNT2P45379 298 aaPredicted RBP28.23■■■□□ 2.11
CHRNA7-220ENST00000636850 PARD3Q8TEW0 1356 aa28.23■■■□□ 2.11
CHRNA7-220ENST00000636850 NBPF6Q5VWK0 638 aa28.21■■■□□ 2.11
CHRNA7-220ENST00000636850 NBPF4Q96M43 638 aa28.21■■■□□ 2.11
CHRNA7-220ENST00000636850 EZH2Q15910 746 aaKnown RBP28.2■■■□□ 2.1
CHRNA7-220ENST00000636850 USHBP1Q8N6Y0 703 aa28.2■■■□□ 2.1
CHRNA7-220ENST00000636850 POLKQ9UBT6 870 aa28.2■■■□□ 2.1
CHRNA7-220ENST00000636850 WASHC2AQ641Q2 1341 aa28.19■■■□□ 2.1
CHRNA7-220ENST00000636850 CAMKK2Q96RR4 588 aa28.19■■■□□ 2.1
CHRNA7-220ENST00000636850 DOT1LQ8TEK3 1739 aa28.18■■■□□ 2.1
CHRNA7-220ENST00000636850 MORC1Q86VD1 984 aa28.17■■■□□ 2.1
CHRNA7-220ENST00000636850 BCL11BQ9C0K0 894 aaPredicted RBP28.17■■■□□ 2.1
CHRNA7-220ENST00000636850 BTAF1O14981 1849 aa28.17■■■□□ 2.1
CHRNA7-220ENST00000636850 AMER1Q5JTC6 1135 aaPredicted RBP28.15■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 280.5 ms