RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 EIF4G2P78344 907 aaKnown RBP eCLIP9.45□□□□□ -0.9
UPF3B-205ENST00000636792 NBPF1Q3BBV0 1214 aa9.45□□□□□ -0.9
UPF3B-205ENST00000636792 CENPJQ9HC77 1338 aaPredicted RBP9.45□□□□□ -0.9
UPF3B-205ENST00000636792 ROBO2Q9HCK4 1378 aa9.45□□□□□ -0.9
UPF3B-205ENST00000636792 TOPAZ1Q8N9V7 1692 aa9.45□□□□□ -0.9
UPF3B-205ENST00000636792 ARHGAP33O14559 1287 aa9.44□□□□□ -0.9
UPF3B-205ENST00000636792 PUS7Q96PZ0 661 aaKnown RBP9.44□□□□□ -0.9
UPF3B-205ENST00000636792 ANKARQ7Z5J8 1434 aa9.44□□□□□ -0.9
UPF3B-205ENST00000636792 TULP4Q9NRJ4 1543 aa9.44□□□□□ -0.9
UPF3B-205ENST00000636792 KIF1AQ12756 1690 aa9.43□□□□□ -0.9
UPF3B-205ENST00000636792 NINLQ9Y2I6 1382 aa9.43□□□□□ -0.9
UPF3B-205ENST00000636792 ZNF335Q9H4Z2 1342 aaPredicted RBP9.43□□□□□ -0.9
UPF3B-205ENST00000636792 TMEM132EQ6IEE7 984 aa9.43□□□□□ -0.9
UPF3B-205ENST00000636792 ADGRD1Q6QNK2 874 aa9.43□□□□□ -0.9
UPF3B-205ENST00000636792 POTEEQ6S8J3 1075 aa9.43□□□□□ -0.9
UPF3B-205ENST00000636792 MSH6P52701 1360 aa9.42□□□□□ -0.9
UPF3B-205ENST00000636792 CDCA8Q53HL2 280 aa9.42□□□□□ -0.9
UPF3B-205ENST00000636792 TRAK1Q9UPV9 953 aa9.42□□□□□ -0.9
UPF3B-205ENST00000636792 TMEM94Q12767 1356 aa9.41□□□□□ -0.9
UPF3B-205ENST00000636792 PRAM1Q96QH2 718 aa9.41□□□□□ -0.9
UPF3B-205ENST00000636792 POGKQ9P215 609 aa9.41□□□□□ -0.9
UPF3B-205ENST00000636792 ATAD2Q6PL18 1390 aa9.4□□□□□ -0.9
UPF3B-205ENST00000636792 EVC2Q86UK5 1308 aa9.4□□□□□ -0.9
UPF3B-205ENST00000636792 MYOM1P52179 1685 aa9.4□□□□□ -0.9
UPF3B-205ENST00000636792 PROSER2Q86WR7 435 aaPredicted RBP9.4□□□□□ -0.9
UPF3B-205ENST00000636792 C19orf44Q9H6X5 657 aa9.4□□□□□ -0.9
UPF3B-205ENST00000636792 USP32Q8NFA0 1604 aa9.39□□□□□ -0.91
UPF3B-205ENST00000636792 TMF1P82094 1093 aa9.39□□□□□ -0.91
UPF3B-205ENST00000636792 CADPS2Q86UW7 1296 aa9.39□□□□□ -0.91
UPF3B-205ENST00000636792 TESK2Q96S53 571 aa9.39□□□□□ -0.91
UPF3B-205ENST00000636792 STK26Q9P289 416 aa9.39□□□□□ -0.91
UPF3B-205ENST00000636792 ATP7BP35670 1465 aa9.39□□□□□ -0.91
UPF3B-205ENST00000636792 PLEKHH1Q9ULM0 1364 aa9.38□□□□□ -0.91
UPF3B-205ENST00000636792 ST20-MTHFSA0A0A6YYL1 179 aa9.38□□□□□ -0.91
UPF3B-205ENST00000636792 TK2O00142 265 aa9.38□□□□□ -0.91
UPF3B-205ENST00000636792 HSPA5P11021 654 aaKnown RBP9.38□□□□□ -0.91
UPF3B-205ENST00000636792 AKAP12Q02952 1782 aa9.37□□□□□ -0.91
UPF3B-205ENST00000636792 MST1RQ04912 1400 aa9.37□□□□□ -0.91
UPF3B-205ENST00000636792 BRD4O60885 1362 aaPredicted RBP9.37□□□□□ -0.91
UPF3B-205ENST00000636792 MON2Q7Z3U7 1717 aa9.36□□□□□ -0.91
UPF3B-205ENST00000636792 WASLO00401 505 aaPredicted RBP9.36□□□□□ -0.91
UPF3B-205ENST00000636792 ECM2O94769 699 aaPredicted RBP9.36□□□□□ -0.91
UPF3B-205ENST00000636792 WAPLQ7Z5K2 1190 aa9.36□□□□□ -0.91
UPF3B-205ENST00000636792 RGPD8O14715 1765 aaPredicted RBP9.36□□□□□ -0.91
UPF3B-205ENST00000636792 NHSL1Q5SYE7 1610 aa9.35□□□□□ -0.91
UPF3B-205ENST00000636792 C1orf167Q5SNV9 1468 aa9.34□□□□□ -0.91
UPF3B-205ENST00000636792 MINK1Q8N4C8 1332 aaPredicted RBP9.34□□□□□ -0.91
UPF3B-205ENST00000636792 NRKQ7Z2Y5 1582 aa9.34□□□□□ -0.91
UPF3B-205ENST00000636792 ATF3P18847 181 aa9.34□□□□□ -0.91
UPF3B-205ENST00000636792 C14orf37Q86TY3 774 aa9.34□□□□□ -0.91
UPF3B-205ENST00000636792 DISP3Q9P2K9 1392 aa9.34□□□□□ -0.91
UPF3B-205ENST00000636792 AHDC1Q5TGY3 1603 aaPredicted RBP9.34□□□□□ -0.91
UPF3B-205ENST00000636792 USP54Q70EL1 1684 aa9.33□□□□□ -0.92
UPF3B-205ENST00000636792 PPP4R3BQ5MIZ7 849 aa9.33□□□□□ -0.92
UPF3B-205ENST00000636792 ROBO1Q9Y6N7 1651 aa9.32□□□□□ -0.92
UPF3B-205ENST00000636792 TOM1O60784 492 aa9.32□□□□□ -0.92
UPF3B-205ENST00000636792 CERKQ8TCT0 537 aa9.32□□□□□ -0.92
UPF3B-205ENST00000636792 PTCD2Q8WV60 388 aaKnown RBP9.32□□□□□ -0.92
UPF3B-205ENST00000636792 POLR3AO14802 1390 aaPredicted RBP9.32□□□□□ -0.92
UPF3B-205ENST00000636792 CCDC7Q96M83 1385 aa9.32□□□□□ -0.92
UPF3B-205ENST00000636792 ANKRD26Q9UPS8 1709 aa9.31□□□□□ -0.92
UPF3B-205ENST00000636792 HRO43593 1189 aa9.31□□□□□ -0.92
UPF3B-205ENST00000636792 SRPK2P78362 688 aaKnown RBP9.31□□□□□ -0.92
UPF3B-205ENST00000636792 SAFB2Q14151 953 aaKnown RBP eCLIP9.31□□□□□ -0.92
UPF3B-205ENST00000636792 KCTD12Q96CX2 325 aaKnown RBP9.31□□□□□ -0.92
UPF3B-205ENST00000636792 CDK19Q9BWU1 502 aa9.31□□□□□ -0.92
UPF3B-205ENST00000636792 ANKRD36BQ8N2N9 1353 aa9.31□□□□□ -0.92
UPF3B-205ENST00000636792 CPSF1Q10570 1443 aaKnown RBP9.31□□□□□ -0.92
UPF3B-205ENST00000636792 PPIP5K1Q6PFW1 1433 aa9.31□□□□□ -0.92
UPF3B-205ENST00000636792 TBC1D12O60347 775 aa9.3□□□□□ -0.92
UPF3B-205ENST00000636792 PSEN2P49810 448 aa9.3□□□□□ -0.92
UPF3B-205ENST00000636792 DMRTA1Q5VZB9 504 aa9.3□□□□□ -0.92
UPF3B-205ENST00000636792 KIF20BQ96Q89 1820 aa9.3□□□□□ -0.92
UPF3B-205ENST00000636792 TRPM3Q9HCF6 1732 aaPredicted RBP9.3□□□□□ -0.92
UPF3B-205ENST00000636792 KIF7Q2M1P5 1343 aa9.3□□□□□ -0.92
UPF3B-205ENST00000636792 PLEKHG3A1L390 1219 aa9.29□□□□□ -0.92
UPF3B-205ENST00000636792 NUDT16Q96DE0 195 aaKnown RBP9.29□□□□□ -0.92
UPF3B-205ENST00000636792 HIRIP3Q9BW71 556 aaPredicted RBP9.29□□□□□ -0.92
UPF3B-205ENST00000636792 EDC4Q6P2E9 1401 aaKnown RBP9.29□□□□□ -0.92
UPF3B-205ENST00000636792 ALS2Q96Q42 1657 aa9.29□□□□□ -0.92
UPF3B-205ENST00000636792 NPHP3Q7Z494 1330 aa9.29□□□□□ -0.92
UPF3B-205ENST00000636792 PRR36Q9H6K5 1346 aa9.29□□□□□ -0.92
UPF3B-205ENST00000636792 MED1Q15648 1581 aaPredicted RBP9.29□□□□□ -0.92
UPF3B-205ENST00000636792 CD163L1Q9NR16 1453 aa9.28□□□□□ -0.92
UPF3B-205ENST00000636792 TERF2IPQ9NYB0 399 aa9.28□□□□□ -0.92
UPF3B-205ENST00000636792 SLAIN2Q9P270 581 aa9.28□□□□□ -0.92
UPF3B-205ENST00000636792 USP6P35125 1406 aa9.28□□□□□ -0.92
UPF3B-205ENST00000636792 WASHC2AQ641Q2 1341 aa9.28□□□□□ -0.92
UPF3B-205ENST00000636792 PHLPP1O60346 1717 aa9.28□□□□□ -0.92
UPF3B-205ENST00000636792 NSD2O96028 1365 aa9.27□□□□□ -0.93
UPF3B-205ENST00000636792 PPP1R37O75864 691 aa9.27□□□□□ -0.93
UPF3B-205ENST00000636792 PXDNQ92626 1479 aa9.27□□□□□ -0.93
UPF3B-205ENST00000636792 COL16A1Q07092 1604 aaPredicted RBP9.27□□□□□ -0.93
UPF3B-205ENST00000636792 COL22A1Q8NFW1 1626 aaPredicted RBP9.27□□□□□ -0.93
UPF3B-205ENST00000636792 SHPRHQ149N8 1683 aa9.26□□□□□ -0.93
UPF3B-205ENST00000636792 SBNO1A3KN83 1393 aa9.26□□□□□ -0.93
UPF3B-205ENST00000636792 NPC1L1Q9UHC9 1359 aa9.26□□□□□ -0.93
UPF3B-205ENST00000636792 FOXK1P85037 733 aa9.26□□□□□ -0.93
UPF3B-205ENST00000636792 HDGFL2Q7Z4V5 671 aaPredicted RBP9.26□□□□□ -0.93
UPF3B-205ENST00000636792 PLPP6Q8IY26 295 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms