RNA–Protein interactions for RNA: ENST00000636640.1

SYNGAP1-216, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 118 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-216ENST00000636640 MYT1Q01538 1121 aa2.36□□□□□ -2.03
SYNGAP1-216ENST00000636640 NEUROD1Q13562 356 aa2.36□□□□□ -2.03
SYNGAP1-216ENST00000636640 R3HDM1Q15032 1099 aaKnown RBP2.36□□□□□ -2.03
SYNGAP1-216ENST00000636640 KRT27Q7Z3Y8 459 aa2.36□□□□□ -2.03
SYNGAP1-216ENST00000636640 NGDNQ8NEJ9 315 aaKnown RBP2.36□□□□□ -2.03
SYNGAP1-216ENST00000636640 CABP1Q9NZU7 370 aa2.36□□□□□ -2.03
SYNGAP1-216ENST00000636640 C4AP0C0L4 1744 aa2.36□□□□□ -2.03
SYNGAP1-216ENST00000636640 C4BP0C0L5 1744 aa2.36□□□□□ -2.03
SYNGAP1-216ENST00000636640 COL5A3P25940 1745 aaPredicted RBP2.36□□□□□ -2.03
SYNGAP1-216ENST00000636640 USP19O94966 1318 aa2.36□□□□□ -2.03
SYNGAP1-216ENST00000636640 ARHGEF10O15013 1369 aa2.36□□□□□ -2.03
SYNGAP1-216ENST00000636640 GPRASP1Q5JY77 1395 aa2.36□□□□□ -2.03
SYNGAP1-216ENST00000636640 SOX12O15370 315 aa2.35□□□□□ -2.03
SYNGAP1-216ENST00000636640 HRCP23327 699 aa2.35□□□□□ -2.03
SYNGAP1-216ENST00000636640 PROM2Q8N271 834 aa2.35□□□□□ -2.03
SYNGAP1-216ENST00000636640 ABTB2Q8N961 1025 aa2.35□□□□□ -2.03
SYNGAP1-216ENST00000636640 CAMKK2Q96RR4 588 aa2.35□□□□□ -2.03
SYNGAP1-216ENST00000636640 ANO8Q9HCE9 1232 aaPredicted RBP2.35□□□□□ -2.03
SYNGAP1-216ENST00000636640 PRDM11Q9NQV5 511 aa2.35□□□□□ -2.03
SYNGAP1-216ENST00000636640 SIPA1L3O60292 1781 aaPredicted RBP2.35□□□□□ -2.03
SYNGAP1-216ENST00000636640 CENPJQ9HC77 1338 aaPredicted RBP2.35□□□□□ -2.03
SYNGAP1-216ENST00000636640 KIF13BQ9NQT8 1826 aa2.35□□□□□ -2.03
SYNGAP1-216ENST00000636640 DISP2A7MBM2 1401 aa2.34□□□□□ -2.03
SYNGAP1-216ENST00000636640 CPSF1Q10570 1443 aaKnown RBP2.34□□□□□ -2.03
SYNGAP1-216ENST00000636640 TJP1Q07157 1748 aa2.34□□□□□ -2.03
SYNGAP1-216ENST00000636640 ARFGEF1Q9Y6D6 1849 aa2.34□□□□□ -2.03
SYNGAP1-216ENST00000636640 KCNQ2O43526 872 aa2.34□□□□□ -2.03
SYNGAP1-216ENST00000636640 APBA3O96018 575 aa2.34□□□□□ -2.03
SYNGAP1-216ENST00000636640 GCP02774 474 aa2.34□□□□□ -2.03
SYNGAP1-216ENST00000636640 KCNQ4P56696 695 aa2.34□□□□□ -2.03
SYNGAP1-216ENST00000636640 NLRP6P59044 892 aa2.34□□□□□ -2.03
SYNGAP1-216ENST00000636640 SRPK2P78362 688 aaKnown RBP2.34□□□□□ -2.03
SYNGAP1-216ENST00000636640 NME9Q86XW9 330 aa2.34□□□□□ -2.03
SYNGAP1-216ENST00000636640 CCDC125Q86Z20 511 aa2.34□□□□□ -2.03
SYNGAP1-216ENST00000636640 MARCH10Q8NA82 808 aaPredicted RBP2.34□□□□□ -2.03
SYNGAP1-216ENST00000636640 SLC12A5Q9H2X9 1139 aa2.34□□□□□ -2.03
SYNGAP1-216ENST00000636640 CCDC61Q9Y6R9 512 aa2.34□□□□□ -2.03
SYNGAP1-216ENST00000636640 TAF1P21675 1872 aa2.34□□□□□ -2.03
SYNGAP1-216ENST00000636640 TTC21BQ7Z4L5 1316 aa2.34□□□□□ -2.04
SYNGAP1-216ENST00000636640 DICER1Q9UPY3 1922 aaKnown RBP2.34□□□□□ -2.04
SYNGAP1-216ENST00000636640 ADAMTS7Q9UKP4 1686 aa2.34□□□□□ -2.04
SYNGAP1-216ENST00000636640 CPDO75976 1380 aa2.34□□□□□ -2.04
SYNGAP1-216ENST00000636640 SBNO2Q9Y2G9 1366 aa2.34□□□□□ -2.04
SYNGAP1-216ENST00000636640 CRB1P82279 1406 aa2.34□□□□□ -2.04
SYNGAP1-216ENST00000636640 ABCC6O95255 1503 aa2.33□□□□□ -2.04
SYNGAP1-216ENST00000636640 ANKRD31Q8N7Z5 1873 aa2.33□□□□□ -2.04
SYNGAP1-216ENST00000636640 BAG6P46379 1132 aa2.33□□□□□ -2.04
SYNGAP1-216ENST00000636640 EVA1CP58658 441 aa2.33□□□□□ -2.04
SYNGAP1-216ENST00000636640 BARGINQ6ZT62 677 aa2.33□□□□□ -2.04
SYNGAP1-216ENST00000636640 SMIM5Q71RC9 77 aa2.33□□□□□ -2.04
SYNGAP1-216ENST00000636640 ARHGEF25Q86VW2 580 aa2.33□□□□□ -2.04
SYNGAP1-216ENST00000636640 SUGP2Q8IX01 1082 aaKnown RBP eCLIP2.33□□□□□ -2.04
SYNGAP1-216ENST00000636640 ACSBG1Q96GR2 724 aa2.33□□□□□ -2.04
SYNGAP1-216ENST00000636640 A0A1W2PP64 1363 aa2.33□□□□□ -2.04
SYNGAP1-216ENST00000636640 ROCK2O75116 1388 aaKnown RBP2.33□□□□□ -2.04
SYNGAP1-216ENST00000636640 EIF3AQ14152 1382 aaKnown RBP2.33□□□□□ -2.04
SYNGAP1-216ENST00000636640 AATKQ6ZMQ8 1374 aa2.33□□□□□ -2.04
SYNGAP1-216ENST00000636640 KTN1Q86UP2 1357 aaKnown RBP2.33□□□□□ -2.04
SYNGAP1-216ENST00000636640 DLEC1Q9Y238 1755 aa2.33□□□□□ -2.04
SYNGAP1-216ENST00000636640 NUP98P52948 1817 aa2.33□□□□□ -2.04
SYNGAP1-216ENST00000636640 OVOS2A0A0J9YW53 1432 aa2.33□□□□□ -2.04
SYNGAP1-216ENST00000636640 OVOS2Q6IE36 1432 aa2.33□□□□□ -2.04
SYNGAP1-216ENST00000636640 MEGF6O75095 1541 aa2.32□□□□□ -2.04
SYNGAP1-216ENST00000636640 POLR2AP24928 1970 aaKnown RBP2.32□□□□□ -2.04
SYNGAP1-216ENST00000636640 UBR2Q8IWV8 1755 aa2.32□□□□□ -2.04
SYNGAP1-216ENST00000636640 SF3B2Q13435 895 aaKnown RBP2.32□□□□□ -2.04
SYNGAP1-216ENST00000636640 ZNF827Q17R98 1081 aa2.32□□□□□ -2.04
SYNGAP1-216ENST00000636640 FAM196AQ6ZSG2 479 aa2.32□□□□□ -2.04
SYNGAP1-216ENST00000636640 NLRP13Q86W25 1043 aa2.32□□□□□ -2.04
SYNGAP1-216ENST00000636640 TCP11L2Q8N4U5 519 aa2.32□□□□□ -2.04
SYNGAP1-216ENST00000636640 USHBP1Q8N6Y0 703 aa2.32□□□□□ -2.04
SYNGAP1-216ENST00000636640 TESK2Q96S53 571 aa2.32□□□□□ -2.04
SYNGAP1-216ENST00000636640 LRRC4BQ9NT99 713 aa2.32□□□□□ -2.04
SYNGAP1-216ENST00000636640 ATF5Q9Y2D1 282 aaPredicted RBP2.32□□□□□ -2.04
SYNGAP1-216ENST00000636640 WDR17Q8IZU2 1322 aa2.32□□□□□ -2.04
SYNGAP1-216ENST00000636640 USP31Q70CQ4 1352 aa2.32□□□□□ -2.04
SYNGAP1-216ENST00000636640 OVOS2A0A0G2JMS6 1433 aa2.32□□□□□ -2.04
SYNGAP1-216ENST00000636640 TNS2Q63HR2 1409 aa2.32□□□□□ -2.04
SYNGAP1-216ENST00000636640 ZNF831Q5JPB2 1677 aa2.31□□□□□ -2.04
SYNGAP1-216ENST00000636640 COL11A2P13942 1736 aaPredicted RBP2.31□□□□□ -2.04
SYNGAP1-216ENST00000636640 LAMB2P55268 1798 aa2.31□□□□□ -2.04
SYNGAP1-216ENST00000636640 ST20-MTHFSA0A0A6YYL1 179 aa2.31□□□□□ -2.04
SYNGAP1-216ENST00000636640 ZBTB7AO95365 584 aa2.31□□□□□ -2.04
SYNGAP1-216ENST00000636640 PTGER2P43116 358 aa2.31□□□□□ -2.04
SYNGAP1-216ENST00000636640 PDE3BQ13370 1112 aa2.31□□□□□ -2.04
SYNGAP1-216ENST00000636640 DDB1Q16531 1140 aa2.31□□□□□ -2.04
SYNGAP1-216ENST00000636640 TXNRD1Q16881 649 aa2.31□□□□□ -2.04
SYNGAP1-216ENST00000636640 TOM1L2Q6ZVM7 507 aa2.31□□□□□ -2.04
SYNGAP1-216ENST00000636640 AMIGO3Q86WK7 504 aa2.31□□□□□ -2.04
SYNGAP1-216ENST00000636640 TMC1Q8TDI8 760 aa2.31□□□□□ -2.04
SYNGAP1-216ENST00000636640 LTV1Q96GA3 475 aaPredicted RBP2.31□□□□□ -2.04
SYNGAP1-216ENST00000636640 STAC3Q96MF2 364 aa2.31□□□□□ -2.04
SYNGAP1-216ENST00000636640 SGIP1Q9BQI5 828 aa2.31□□□□□ -2.04
SYNGAP1-216ENST00000636640 CARD14Q9BXL6 1004 aa2.31□□□□□ -2.04
SYNGAP1-216ENST00000636640 CARD11Q9BXL7 1154 aa2.31□□□□□ -2.04
SYNGAP1-216ENST00000636640 GGNBP2Q9H3C7 697 aa2.31□□□□□ -2.04
SYNGAP1-216ENST00000636640 EVC2Q86UK5 1308 aa2.31□□□□□ -2.04
SYNGAP1-216ENST00000636640 NSD2O96028 1365 aa2.31□□□□□ -2.04
SYNGAP1-216ENST00000636640 GOLGB1Q14789 3259 aaKnown RBP2.31□□□□□ -2.04
SYNGAP1-216ENST00000636640 EDC4Q6P2E9 1401 aaKnown RBP2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms