RNA–Protein interactions for RNA: ENST00000636146.1

SYNGAP1-212, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 161 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-212ENST00000636146 CDCA7Q9BWT1 371 aaPredicted RBP11.06□□□□□ -0.64
SYNGAP1-212ENST00000636146 KTN1Q86UP2 1357 aaKnown RBP11.05□□□□□ -0.64
SYNGAP1-212ENST00000636146 OVOS2A0A0G2JMS6 1433 aa11.05□□□□□ -0.64
SYNGAP1-212ENST00000636146 OVOS2A0A0J9YW53 1432 aa11.05□□□□□ -0.64
SYNGAP1-212ENST00000636146 OVOS2Q6IE36 1432 aa11.05□□□□□ -0.64
SYNGAP1-212ENST00000636146 TTC21BQ7Z4L5 1316 aa11.05□□□□□ -0.64
SYNGAP1-212ENST00000636146 TTC21AQ8NDW8 1320 aa11.05□□□□□ -0.64
SYNGAP1-212ENST00000636146 LMO7Q8WWI1 1683 aa11.04□□□□□ -0.64
SYNGAP1-212ENST00000636146 USP47Q96K76 1375 aa11.04□□□□□ -0.64
SYNGAP1-212ENST00000636146 HDGFL2Q7Z4V5 671 aaPredicted RBP11.04□□□□□ -0.64
SYNGAP1-212ENST00000636146 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.04□□□□□ -0.64
SYNGAP1-212ENST00000636146 CARD11Q9BXL7 1154 aa11.04□□□□□ -0.64
SYNGAP1-212ENST00000636146 WDR17Q8IZU2 1322 aa11.04□□□□□ -0.64
SYNGAP1-212ENST00000636146 EXOC5O00471 708 aa11.03□□□□□ -0.64
SYNGAP1-212ENST00000636146 BCL11BQ9C0K0 894 aaPredicted RBP11.03□□□□□ -0.64
SYNGAP1-212ENST00000636146 SPON1Q9HCB6 807 aa11.03□□□□□ -0.64
SYNGAP1-212ENST00000636146 PARP4Q9UKK3 1724 aaKnown RBP11.02□□□□□ -0.65
SYNGAP1-212ENST00000636146 SLC24A1O60721 1099 aa11.02□□□□□ -0.65
SYNGAP1-212ENST00000636146 ARHGEF25Q86VW2 580 aa11.02□□□□□ -0.65
SYNGAP1-212ENST00000636146 CPSF1Q10570 1443 aaKnown RBP11.01□□□□□ -0.65
SYNGAP1-212ENST00000636146 SLIT3O75094 1523 aa11.01□□□□□ -0.65
SYNGAP1-212ENST00000636146 CARD10Q9BWT7 1032 aa11.01□□□□□ -0.65
SYNGAP1-212ENST00000636146 NLRP2Q9NX02 1062 aa11.01□□□□□ -0.65
SYNGAP1-212ENST00000636146 TERF2IPQ9NYB0 399 aa11.01□□□□□ -0.65
SYNGAP1-212ENST00000636146 AXIN2Q9Y2T1 843 aa11.01□□□□□ -0.65
SYNGAP1-212ENST00000636146 KCNQ2O43526 872 aa11□□□□□ -0.65
SYNGAP1-212ENST00000636146 PIK3C2AO00443 1686 aa11□□□□□ -0.65
SYNGAP1-212ENST00000636146 PLSCR1O15162 318 aa10.99□□□□□ -0.65
SYNGAP1-212ENST00000636146 HSPA5P11021 654 aaKnown RBP10.99□□□□□ -0.65
SYNGAP1-212ENST00000636146 CCDC7Q96M83 1385 aa10.99□□□□□ -0.65
SYNGAP1-212ENST00000636146 STK32BQ9NY57 414 aa10.98□□□□□ -0.65
SYNGAP1-212ENST00000636146 LRRC37A3O60309 1634 aa10.98□□□□□ -0.65
SYNGAP1-212ENST00000636146 RREB1Q92766 1687 aa10.98□□□□□ -0.65
SYNGAP1-212ENST00000636146 NUP188Q5SRE5 1749 aa10.98□□□□□ -0.65
SYNGAP1-212ENST00000636146 AKAP12Q02952 1782 aa10.98□□□□□ -0.65
SYNGAP1-212ENST00000636146 NME9Q86XW9 330 aa10.97□□□□□ -0.65
SYNGAP1-212ENST00000636146 MARCH10Q8NA82 808 aaPredicted RBP10.97□□□□□ -0.65
SYNGAP1-212ENST00000636146 SBNO2Q9Y2G9 1366 aa10.97□□□□□ -0.65
SYNGAP1-212ENST00000636146 IL2RBP14784 551 aa10.96□□□□□ -0.65
SYNGAP1-212ENST00000636146 DIEXFQ68CQ4 756 aaKnown RBP10.96□□□□□ -0.65
SYNGAP1-212ENST00000636146 RGPD5Q99666 1765 aa10.95□□□□□ -0.66
SYNGAP1-212ENST00000636146 YY1P25490 414 aa10.95□□□□□ -0.66
SYNGAP1-212ENST00000636146 TXNRD1Q16881 649 aa10.95□□□□□ -0.66
SYNGAP1-212ENST00000636146 ANKRD24Q8TF21 1146 aa10.95□□□□□ -0.66
SYNGAP1-212ENST00000636146 ACSBG1Q96GR2 724 aa10.95□□□□□ -0.66
SYNGAP1-212ENST00000636146 SLC12A5Q9H2X9 1139 aa10.95□□□□□ -0.66
SYNGAP1-212ENST00000636146 COL18A1P39060 1754 aa10.95□□□□□ -0.66
SYNGAP1-212ENST00000636146 ZBTB7AO95365 584 aa10.94□□□□□ -0.66
SYNGAP1-212ENST00000636146 LTV1Q96GA3 475 aaPredicted RBP10.94□□□□□ -0.66
SYNGAP1-212ENST00000636146 COG3Q96JB2 828 aa10.94□□□□□ -0.66
SYNGAP1-212ENST00000636146 EDC4Q6P2E9 1401 aaKnown RBP10.93□□□□□ -0.66
SYNGAP1-212ENST00000636146 SBF2Q86WG5 1849 aa10.93□□□□□ -0.66
SYNGAP1-212ENST00000636146 WNK3Q9BYP7 1800 aa10.93□□□□□ -0.66
SYNGAP1-212ENST00000636146 MON2Q7Z3U7 1717 aa10.93□□□□□ -0.66
SYNGAP1-212ENST00000636146 PEAK1Q9H792 1746 aa10.93□□□□□ -0.66
SYNGAP1-212ENST00000636146 ERBB3P21860 1342 aa10.93□□□□□ -0.66
SYNGAP1-212ENST00000636146 AMPHP49418 695 aa10.93□□□□□ -0.66
SYNGAP1-212ENST00000636146 CDCA8Q53HL2 280 aa10.93□□□□□ -0.66
SYNGAP1-212ENST00000636146 PTF1AQ7RTS3 328 aa10.93□□□□□ -0.66
SYNGAP1-212ENST00000636146 ATF5Q9Y2D1 282 aaPredicted RBP10.93□□□□□ -0.66
SYNGAP1-212ENST00000636146 NFAT5O94916 1531 aa10.93□□□□□ -0.66
SYNGAP1-212ENST00000636146 ABCC6O95255 1503 aa10.93□□□□□ -0.66
SYNGAP1-212ENST00000636146 RGPD3A6NKT7 1758 aaPredicted RBP10.93□□□□□ -0.66
SYNGAP1-212ENST00000636146 RGPD4Q7Z3J3 1758 aa10.93□□□□□ -0.66
SYNGAP1-212ENST00000636146 TNS2Q63HR2 1409 aa10.92□□□□□ -0.66
SYNGAP1-212ENST00000636146 USP31Q70CQ4 1352 aa10.92□□□□□ -0.66
SYNGAP1-212ENST00000636146 NINLQ9Y2I6 1382 aa10.92□□□□□ -0.66
SYNGAP1-212ENST00000636146 SLC15A2Q16348 729 aa10.92□□□□□ -0.66
SYNGAP1-212ENST00000636146 DDX54Q8TDD1 881 aaKnown RBP10.92□□□□□ -0.66
SYNGAP1-212ENST00000636146 SYTL4Q96C24 671 aaPredicted RBP10.92□□□□□ -0.66
SYNGAP1-212ENST00000636146 BCL9O00512 1426 aa10.92□□□□□ -0.66
SYNGAP1-212ENST00000636146 PUS7Q96PZ0 661 aaKnown RBP10.91□□□□□ -0.66
SYNGAP1-212ENST00000636146 ANO8Q9HCE9 1232 aaPredicted RBP10.91□□□□□ -0.66
SYNGAP1-212ENST00000636146 A0A1W2PP64 1363 aa10.9□□□□□ -0.66
SYNGAP1-212ENST00000636146 LTN1O94822 1766 aa10.9□□□□□ -0.66
SYNGAP1-212ENST00000636146 ST20-MTHFSA0A0A6YYL1 179 aa10.9□□□□□ -0.66
SYNGAP1-212ENST00000636146 PROM2Q8N271 834 aa10.9□□□□□ -0.66
SYNGAP1-212ENST00000636146 WASHC2AQ641Q2 1341 aa10.89□□□□□ -0.67
SYNGAP1-212ENST00000636146 TMF1P82094 1093 aa10.89□□□□□ -0.67
SYNGAP1-212ENST00000636146 IP6K1Q92551 441 aa10.89□□□□□ -0.67
SYNGAP1-212ENST00000636146 MTFR1LQ9H019 292 aa10.89□□□□□ -0.67
SYNGAP1-212ENST00000636146 KIF7Q2M1P5 1343 aa10.88□□□□□ -0.67
SYNGAP1-212ENST00000636146 KAT6BQ8WYB5 2073 aa10.88□□□□□ -0.67
SYNGAP1-212ENST00000636146 KLHL34Q8N239 644 aa10.88□□□□□ -0.67
SYNGAP1-212ENST00000636146 CD163L1Q9NR16 1453 aa10.87□□□□□ -0.67
SYNGAP1-212ENST00000636146 TESK2Q96S53 571 aa10.87□□□□□ -0.67
SYNGAP1-212ENST00000636146 PDGFDQ9GZP0 370 aaPredicted RBP10.87□□□□□ -0.67
SYNGAP1-212ENST00000636146 NHSQ6T4R5 1651 aa10.86□□□□□ -0.67
SYNGAP1-212ENST00000636146 SMG6Q86US8 1419 aaKnown RBP10.86□□□□□ -0.67
SYNGAP1-212ENST00000636146 MSH5O43196 834 aa10.86□□□□□ -0.67
SYNGAP1-212ENST00000636146 POLD1P28340 1107 aa10.86□□□□□ -0.67
SYNGAP1-212ENST00000636146 RAPGEF4Q8WZA2 1011 aa10.86□□□□□ -0.67
SYNGAP1-212ENST00000636146 FHDC1Q9C0D6 1143 aaPredicted RBP10.86□□□□□ -0.67
SYNGAP1-212ENST00000636146 HOXC9P31274 260 aa10.85□□□□□ -0.67
SYNGAP1-212ENST00000636146 SLC27A3Q5K4L6 730 aa10.85□□□□□ -0.67
SYNGAP1-212ENST00000636146 ZCRB1Q8TBF4 217 aaKnown RBP10.85□□□□□ -0.67
SYNGAP1-212ENST00000636146 ARXQ96QS3 562 aa10.85□□□□□ -0.67
SYNGAP1-212ENST00000636146 TFCP2L1Q9NZI6 479 aa10.85□□□□□ -0.67
SYNGAP1-212ENST00000636146 USP54Q70EL1 1684 aa10.85□□□□□ -0.67
SYNGAP1-212ENST00000636146 CASZ1Q86V15 1759 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms