RNA–Protein interactions for RNA: ENST00000635856.1

CHD2-221, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-221ENST00000635856 NEK11Q8NG66 645 aa7.27□□□□□ -1.25
CHD2-221ENST00000635856 CEP89Q96ST8 783 aa7.27□□□□□ -1.25
CHD2-221ENST00000635856 PES1O00541 588 aaKnown RBP7.27□□□□□ -1.25
CHD2-221ENST00000635856 TRIM66O15016 1216 aa7.27□□□□□ -1.25
CHD2-221ENST00000635856 RBBP5Q15291 538 aaKnown RBP7.27□□□□□ -1.25
CHD2-221ENST00000635856 RTF1Q92541 710 aaKnown RBP7.27□□□□□ -1.25
CHD2-221ENST00000635856 PRPF40AO75400 957 aaKnown RBP7.27□□□□□ -1.25
CHD2-221ENST00000635856 EIF3JO75822 258 aaKnown RBP7.27□□□□□ -1.25
CHD2-221ENST00000635856 TMCO3Q6UWJ1 677 aa7.27□□□□□ -1.25
CHD2-221ENST00000635856 TTC12Q9H892 705 aaPredicted RBP7.27□□□□□ -1.25
CHD2-221ENST00000635856 SPATS2LQ9NUQ6 558 aaKnown RBP7.27□□□□□ -1.25
CHD2-221ENST00000635856 BAG4O95429 457 aaKnown RBP7.26□□□□□ -1.25
CHD2-221ENST00000635856 NCBP1Q09161 790 aaKnown RBP7.26□□□□□ -1.25
CHD2-221ENST00000635856 OSCARQ8IYS5 282 aa7.26□□□□□ -1.25
CHD2-221ENST00000635856 RPUSD2Q8IZ73 545 aaKnown RBP7.26□□□□□ -1.25
CHD2-221ENST00000635856 SEC24BO95487 1268 aa7.26□□□□□ -1.25
CHD2-221ENST00000635856 TBC1D22AQ8WUA7 517 aa7.26□□□□□ -1.25
CHD2-221ENST00000635856 WWC2Q6AWC2 1192 aa7.26□□□□□ -1.25
CHD2-221ENST00000635856 CCDC34Q96HJ3 373 aa7.26□□□□□ -1.25
CHD2-221ENST00000635856 RWDD1Q9H446 243 aaPredicted RBP7.26□□□□□ -1.25
CHD2-221ENST00000635856 GAPVD1Q14C86 1478 aa7.26□□□□□ -1.25
CHD2-221ENST00000635856 CGNL1Q0VF96 1302 aa7.26□□□□□ -1.25
CHD2-221ENST00000635856 EIF3AQ14152 1382 aaKnown RBP7.26□□□□□ -1.25
CHD2-221ENST00000635856 CTIFO43310 598 aaKnown RBP7.25□□□□□ -1.25
CHD2-221ENST00000635856 LMAN1P49257 510 aa7.25□□□□□ -1.25
CHD2-221ENST00000635856 SRLQ86TD4 932 aa7.25□□□□□ -1.25
CHD2-221ENST00000635856 SMC5Q8IY18 1101 aa7.25□□□□□ -1.25
CHD2-221ENST00000635856 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.25□□□□□ -1.25
CHD2-221ENST00000635856 SPINK5Q9NQ38 1064 aaPredicted RBP7.25□□□□□ -1.25
CHD2-221ENST00000635856 GTF3C6Q969F1 213 aa7.25□□□□□ -1.25
CHD2-221ENST00000635856 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.25□□□□□ -1.25
CHD2-221ENST00000635856 KLHL33A6NCF5 533 aa7.25□□□□□ -1.25
CHD2-221ENST00000635856 CCDC27Q2M243 656 aa7.25□□□□□ -1.25
CHD2-221ENST00000635856 RINLQ6ZS11 566 aa7.25□□□□□ -1.25
CHD2-221ENST00000635856 NUTM1Q86Y26 1132 aa7.25□□□□□ -1.25
CHD2-221ENST00000635856 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.25□□□□□ -1.251e-6■□□□□ 11.1
CHD2-221ENST00000635856 SH3GL3Q99963 347 aa7.25□□□□□ -1.25
CHD2-221ENST00000635856 ACBD3Q9H3P7 528 aa7.25□□□□□ -1.25
CHD2-221ENST00000635856 POLKQ9UBT6 870 aa7.25□□□□□ -1.25
CHD2-221ENST00000635856 RRBP1Q9P2E9 1410 aaKnown RBP7.25□□□□□ -1.25
CHD2-221ENST00000635856 MAPKBP1O60336 1514 aa7.25□□□□□ -1.25
CHD2-221ENST00000635856 ERICH3Q5RHP9 1530 aa7.25□□□□□ -1.25
CHD2-221ENST00000635856 TOPBP1Q92547 1522 aa7.25□□□□□ -1.25
CHD2-221ENST00000635856 SWT1Q5T5J6 900 aaKnown RBP7.25□□□□□ -1.25
CHD2-221ENST00000635856 MICALL1Q8N3F8 863 aa7.25□□□□□ -1.25
CHD2-221ENST00000635856 DNMBPQ6XZF7 1577 aa7.24□□□□□ -1.25
CHD2-221ENST00000635856 ARID3CA6NKF2 412 aa7.24□□□□□ -1.25
CHD2-221ENST00000635856 SSFA2P28290 1259 aa7.24□□□□□ -1.25
CHD2-221ENST00000635856 USP19O94966 1318 aa7.24□□□□□ -1.25
CHD2-221ENST00000635856 SCAPERQ9BY12 1400 aa7.24□□□□□ -1.25
CHD2-221ENST00000635856 RAPGEF2Q9Y4G8 1499 aa7.24□□□□□ -1.25
CHD2-221ENST00000635856 A0A1B0GUA9 196 aa7.24□□□□□ -1.25
CHD2-221ENST00000635856 KIAA1328Q86T90 577 aa7.24□□□□□ -1.25
CHD2-221ENST00000635856 SUGP1Q8IWZ8 645 aaKnown RBP7.24□□□□□ -1.25
CHD2-221ENST00000635856 VEZTQ9HBM0 779 aa7.24□□□□□ -1.25
CHD2-221ENST00000635856 SPTLC3Q9NUV7 552 aa7.24□□□□□ -1.25
CHD2-221ENST00000635856 PPP6R1Q9UPN7 881 aa7.24□□□□□ -1.25
CHD2-221ENST00000635856 NPHP1O15259 732 aa7.24□□□□□ -1.25
CHD2-221ENST00000635856 ADCY5O95622 1261 aa7.24□□□□□ -1.25
CHD2-221ENST00000635856 ERC1Q8IUD2 1116 aa7.24□□□□□ -1.25
CHD2-221ENST00000635856 ANKRD18AQ8IVF6 992 aa7.24□□□□□ -1.25
CHD2-221ENST00000635856 FBXO18Q8NFZ0 1043 aa7.24□□□□□ -1.25
CHD2-221ENST00000635856 C16orf45Q96MC5 204 aaPredicted RBP7.24□□□□□ -1.25
CHD2-221ENST00000635856 GOPCQ9HD26 462 aa7.24□□□□□ -1.25
CHD2-221ENST00000635856 TRAF1Q13077 416 aa7.23□□□□□ -1.25
CHD2-221ENST00000635856 GRIN2BQ13224 1484 aa7.23□□□□□ -1.25
CHD2-221ENST00000635856 CAND2O75155 1236 aa7.23□□□□□ -1.25
CHD2-221ENST00000635856 CT47B1P0C2W7 299 aaPredicted RBP7.23□□□□□ -1.25
CHD2-221ENST00000635856 FILIP1Q7Z7B0 1213 aa7.23□□□□□ -1.25
CHD2-221ENST00000635856 C17orf53Q8N3J3 647 aaPredicted RBP7.23□□□□□ -1.25
CHD2-221ENST00000635856 MTUS2Q5JR59 1369 aa7.23□□□□□ -1.25
CHD2-221ENST00000635856 K7ELQ4 463 aaPredicted RBP7.23□□□□□ -1.25
CHD2-221ENST00000635856 SNX21Q969T3 373 aa7.23□□□□□ -1.25
CHD2-221ENST00000635856 CDCA7LQ96GN5 454 aa7.23□□□□□ -1.25
CHD2-221ENST00000635856 USP25Q9UHP3 1055 aa7.23□□□□□ -1.25
CHD2-221ENST00000635856 MYBBP1AQ9BQG0 1328 aaKnown RBP7.22□□□□□ -1.25
CHD2-221ENST00000635856 TRIM6Q9C030 488 aaPredicted RBP7.22□□□□□ -1.25
CHD2-221ENST00000635856 SLC24A3Q9HC58 644 aa7.22□□□□□ -1.25
CHD2-221ENST00000635856 ETAA1Q9NY74 926 aa7.22□□□□□ -1.25
CHD2-221ENST00000635856 ROCK2O75116 1388 aaKnown RBP7.22□□□□□ -1.25
CHD2-221ENST00000635856 MTA1Q13330 715 aa7.22□□□□□ -1.25
CHD2-221ENST00000635856 SETDB1Q15047 1291 aa7.22□□□□□ -1.25
CHD2-221ENST00000635856 KANK4Q5T7N3 995 aaPredicted RBP7.22□□□□□ -1.25
CHD2-221ENST00000635856 WDR63Q8IWG1 891 aa7.22□□□□□ -1.25
CHD2-221ENST00000635856 TMTC2Q8N394 836 aa7.22□□□□□ -1.25
CHD2-221ENST00000635856 ERO1AQ96HE7 468 aa7.22□□□□□ -1.25
CHD2-221ENST00000635856 GSCP56915 257 aaPredicted RBP7.22□□□□□ -1.25
CHD2-221ENST00000635856 RWDD2BP57060 319 aa7.22□□□□□ -1.25
CHD2-221ENST00000635856 NEDD9Q14511 834 aa7.22□□□□□ -1.25
CHD2-221ENST00000635856 EFCAB13Q8IY85 973 aa7.22□□□□□ -1.25
CHD2-221ENST00000635856 STK31Q9BXU1 1019 aa7.22□□□□□ -1.25
CHD2-221ENST00000635856 PSMD2Q13200 908 aa7.22□□□□□ -1.25
CHD2-221ENST00000635856 TTC19Q6DKK2 380 aaPredicted RBP7.22□□□□□ -1.25
CHD2-221ENST00000635856 BRD4O60885 1362 aaPredicted RBP7.21□□□□□ -1.25
CHD2-221ENST00000635856 PDCD2Q16342 344 aaPredicted RBP7.21□□□□□ -1.25
CHD2-221ENST00000635856 CEP135Q66GS9 1140 aa7.21□□□□□ -1.25
CHD2-221ENST00000635856 CCDC186Q7Z3E2 898 aa7.21□□□□□ -1.25
CHD2-221ENST00000635856 KLHL23Q8NBE8 558 aa7.21□□□□□ -1.25
CHD2-221ENST00000635856 MKRN1Q9UHC7 482 aaKnown RBP7.21□□□□□ -1.25
CHD2-221ENST00000635856 MYO6Q9UM54 1294 aa7.21□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms