RNA–Protein interactions for RNA: ENST00000635828.1

CDKL5-209, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5 BASIC

Gene CDKL5, Length 3,823 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-209ENST00000635828 BCL9LQ86UU0 1499 aa11.61□□□□□ -0.55
CDKL5-209ENST00000635828 LARP1Q6PKG0 1096 aaKnown RBP11.61□□□□□ -0.55
CDKL5-209ENST00000635828 USHBP1Q8N6Y0 703 aa11.61□□□□□ -0.55
CDKL5-209ENST00000635828 PRKRIP1Q9H875 184 aaPredicted RBP11.61□□□□□ -0.55
CDKL5-209ENST00000635828 LMO7Q8WWI1 1683 aa11.61□□□□□ -0.55
CDKL5-209ENST00000635828 HOXC9P31274 260 aa11.61□□□□□ -0.55
CDKL5-209ENST00000635828 BRD4O60885 1362 aaPredicted RBP11.61□□□□□ -0.55
CDKL5-209ENST00000635828 PPP2R1AP30153 589 aa11.6□□□□□ -0.55
CDKL5-209ENST00000635828 DIEXFQ68CQ4 756 aaKnown RBP11.6□□□□□ -0.55
CDKL5-209ENST00000635828 PARD3Q8TEW0 1356 aa11.6□□□□□ -0.55
CDKL5-209ENST00000635828 AMPHP49418 695 aa11.59□□□□□ -0.55
CDKL5-209ENST00000635828 POTEAQ6S8J7 498 aa11.59□□□□□ -0.55
CDKL5-209ENST00000635828 KCNH5Q8NCM2 988 aa11.59□□□□□ -0.55
CDKL5-209ENST00000635828 USP21Q9UK80 565 aa11.59□□□□□ -0.55
CDKL5-209ENST00000635828 SLIT2O94813 1529 aa11.58□□□□□ -0.56
CDKL5-209ENST00000635828 CPDO75976 1380 aa11.58□□□□□ -0.56
CDKL5-209ENST00000635828 NRAPQ86VF7 1730 aa11.58□□□□□ -0.56
CDKL5-209ENST00000635828 MIER1Q8N108 512 aa11.58□□□□□ -0.56
CDKL5-209ENST00000635828 COL5A2P05997 1499 aaPredicted RBP11.57□□□□□ -0.56
CDKL5-209ENST00000635828 FNBP4Q8N3X1 1017 aaPredicted RBP11.57□□□□□ -0.56
CDKL5-209ENST00000635828 COL14A1Q05707 1796 aaKnown RBP11.57□□□□□ -0.56
CDKL5-209ENST00000635828 NSD2O96028 1365 aa11.57□□□□□ -0.56
CDKL5-209ENST00000635828 NBPF6Q5VWK0 638 aa11.56□□□□□ -0.56
CDKL5-209ENST00000635828 ANKRD24Q8TF21 1146 aa11.56□□□□□ -0.56
CDKL5-209ENST00000635828 IP6K1Q92551 441 aa11.56□□□□□ -0.56
CDKL5-209ENST00000635828 NBPF4Q96M43 638 aa11.56□□□□□ -0.56
CDKL5-209ENST00000635828 NPC1L1Q9UHC9 1359 aa11.56□□□□□ -0.56
CDKL5-209ENST00000635828 EIF4A2Q14240 407 aaKnown RBP11.56□□□□□ -0.56
CDKL5-209ENST00000635828 AATKQ6ZMQ8 1374 aa11.56□□□□□ -0.56
CDKL5-209ENST00000635828 ERBB3P21860 1342 aa11.56□□□□□ -0.56
CDKL5-209ENST00000635828 CCDC9Q9Y3X0 531 aaKnown RBP11.56□□□□□ -0.56
CDKL5-209ENST00000635828 AEBP1Q8IUX7 1158 aa11.55□□□□□ -0.56
CDKL5-209ENST00000635828 EVA1CP58658 441 aa11.55□□□□□ -0.56
CDKL5-209ENST00000635828 FAM182BQ5T319 152 aa11.55□□□□□ -0.56
CDKL5-209ENST00000635828 UNC5CLQ8IV45 518 aa11.55□□□□□ -0.56
CDKL5-209ENST00000635828 QTRT2Q9H974 415 aaKnown RBP11.55□□□□□ -0.56
CDKL5-209ENST00000635828 CSB-PGBD3P0DP91 1061 aa11.54□□□□□ -0.56
CDKL5-209ENST00000635828 PHF23Q9BUL5 403 aaPredicted RBP11.54□□□□□ -0.56
CDKL5-209ENST00000635828 FLT4P35916 1363 aa11.54□□□□□ -0.56
CDKL5-209ENST00000635828 COL3A1P02461 1466 aaPredicted RBP11.53□□□□□ -0.56
CDKL5-209ENST00000635828 HMOX1P09601 288 aa11.53□□□□□ -0.56
CDKL5-209ENST00000635828 TOM1L2Q6ZVM7 507 aa11.53□□□□□ -0.56
CDKL5-209ENST00000635828 GLI3P10071 1580 aa11.53□□□□□ -0.56
CDKL5-209ENST00000635828 GOLGB1Q14789 3259 aaKnown RBP11.53□□□□□ -0.56
CDKL5-209ENST00000635828 FAM98CQ17RN3 349 aaKnown RBP11.53□□□□□ -0.56
CDKL5-209ENST00000635828 EYA1Q99502 592 aa11.53□□□□□ -0.56
CDKL5-209ENST00000635828 NLRP2Q9NX02 1062 aa11.53□□□□□ -0.56
CDKL5-209ENST00000635828 SMG6Q86US8 1419 aaKnown RBP11.52□□□□□ -0.56
CDKL5-209ENST00000635828 ANP32CO43423 234 aa11.52□□□□□ -0.56
CDKL5-209ENST00000635828 NWD2Q9ULI1 1742 aa11.52□□□□□ -0.56
CDKL5-209ENST00000635828 IL13P35225 146 aa11.52□□□□□ -0.57
CDKL5-209ENST00000635828 WDR17Q8IZU2 1322 aa11.51□□□□□ -0.57
CDKL5-209ENST00000635828 MYBBP1AQ9BQG0 1328 aaKnown RBP11.51□□□□□ -0.57
CDKL5-209ENST00000635828 INSRP06213 1382 aa11.51□□□□□ -0.57
CDKL5-209ENST00000635828 U2SURPO15042 1029 aaKnown RBP11.5□□□□□ -0.57
CDKL5-209ENST00000635828 RALBP1Q15311 655 aa11.5□□□□□ -0.57
CDKL5-209ENST00000635828 GJD4Q96KN9 370 aaPredicted RBP11.5□□□□□ -0.57
CDKL5-209ENST00000635828 CDK12Q9NYV4 1490 aaPredicted RBP11.5□□□□□ -0.57
CDKL5-209ENST00000635828 FAM208AQ9UK61 1670 aaKnown RBP11.5□□□□□ -0.57
CDKL5-209ENST00000635828 SPATA31A1Q5TZJ5 1347 aa11.5□□□□□ -0.57
CDKL5-209ENST00000635828 SPATA31A5Q5VU36 1347 aa11.5□□□□□ -0.57
CDKL5-209ENST00000635828 SPATA31A7Q8IWB4 1347 aa11.5□□□□□ -0.57
CDKL5-209ENST00000635828 ATRNO75882 1429 aa11.49□□□□□ -0.57
CDKL5-209ENST00000635828 ILDR2Q71H61 639 aa11.49□□□□□ -0.57
CDKL5-209ENST00000635828 BLMP54132 1417 aaPredicted RBP11.49□□□□□ -0.57
CDKL5-209ENST00000635828 MEGF6O75095 1541 aa11.49□□□□□ -0.57
CDKL5-209ENST00000635828 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.49□□□□□ -0.57
CDKL5-209ENST00000635828 CRB1P82279 1406 aa11.49□□□□□ -0.57
CDKL5-209ENST00000635828 RGPD1P0DJD0 1748 aa11.48□□□□□ -0.57
CDKL5-209ENST00000635828 VPS72Q15906 364 aa11.48□□□□□ -0.57
CDKL5-209ENST00000635828 SULT6B1Q6IMI4 303 aa11.48□□□□□ -0.57
CDKL5-209ENST00000635828 A0A0G2JS52 829 aa11.48□□□□□ -0.57
CDKL5-209ENST00000635828 MYT1Q01538 1121 aa11.48□□□□□ -0.57
CDKL5-209ENST00000635828 RTL1A6NKG5 1358 aa11.48□□□□□ -0.57
CDKL5-209ENST00000635828 BRWD3Q6RI45 1802 aa11.48□□□□□ -0.57
CDKL5-209ENST00000635828 DIAPH1O60610 1272 aaKnown RBP11.48□□□□□ -0.57
CDKL5-209ENST00000635828 TRPC5Q9UL62 973 aaPredicted RBP11.47□□□□□ -0.57
CDKL5-209ENST00000635828 UTRNP46939 3433 aa11.47□□□□□ -0.57
CDKL5-209ENST00000635828 CCDC146Q8IYE0 955 aa11.47□□□□□ -0.57
CDKL5-209ENST00000635828 PHACTR3Q96KR7 559 aa11.46□□□□□ -0.57
CDKL5-209ENST00000635828 MRS2Q9HD23 443 aa11.46□□□□□ -0.57
CDKL5-209ENST00000635828 ZNF772Q68DY9 489 aaPredicted RBP11.46□□□□□ -0.57
CDKL5-209ENST00000635828 ADAMTS8Q9UP79 889 aa11.46□□□□□ -0.57
CDKL5-209ENST00000635828 U2AF1L5P0DN76 240 aaPredicted RBP11.46□□□□□ -0.58
CDKL5-209ENST00000635828 U2AF1Q01081 240 aaKnown RBP eCLIP11.46□□□□□ -0.58
CDKL5-209ENST00000635828 RGS12O14924 1447 aa11.46□□□□□ -0.58
CDKL5-209ENST00000635828 IGSF1Q8N6C5 1336 aa11.45□□□□□ -0.58
CDKL5-209ENST00000635828 TCP11L2Q8N4U5 519 aa11.45□□□□□ -0.58
CDKL5-209ENST00000635828 CARD10Q9BWT7 1032 aa11.45□□□□□ -0.58
CDKL5-209ENST00000635828 PTF1AQ7RTS3 328 aa11.45□□□□□ -0.58
CDKL5-209ENST00000635828 RXRBP28702 533 aa11.45□□□□□ -0.58
CDKL5-209ENST00000635828 FAM9BQ8IZU0 186 aa11.45□□□□□ -0.58
CDKL5-209ENST00000635828 SEPT12Q8IYM1 358 aa11.44□□□□□ -0.58
CDKL5-209ENST00000635828 WNK3Q9BYP7 1800 aa11.44□□□□□ -0.58
CDKL5-209ENST00000635828 SHANK3Q9BYB0 1731 aa11.44□□□□□ -0.58
CDKL5-209ENST00000635828 KIF24Q5T7B8 1368 aa11.43□□□□□ -0.58
CDKL5-209ENST00000635828 LRRC37A3O60309 1634 aa11.43□□□□□ -0.58
CDKL5-209ENST00000635828 ABCC6O95255 1503 aa11.43□□□□□ -0.58
CDKL5-209ENST00000635828 KAT6BQ8WYB5 2073 aa11.43□□□□□ -0.58
CDKL5-209ENST00000635828 PRKAR2BP31323 418 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms