RNA–Protein interactions for RNA: ENST00000635659.1

SMARCA2-244, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 762 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-244ENST00000635659 ZMIZ1Q9ULJ6 1067 aa11.07□□□□□ -0.64
SMARCA2-244ENST00000635659 ZCCHC11Q5TAX3 1644 aaKnown RBP11.06□□□□□ -0.64
SMARCA2-244ENST00000635659 PUS10Q3MIT2 529 aaKnown RBP11.06□□□□□ -0.64
SMARCA2-244ENST00000635659 PLEKHM2Q8IWE5 1019 aa11.06□□□□□ -0.64
SMARCA2-244ENST00000635659 FAM163AQ96GL9 167 aaPredicted RBP11.06□□□□□ -0.64
SMARCA2-244ENST00000635659 PTPRGP23470 1445 aa11.06□□□□□ -0.64
SMARCA2-244ENST00000635659 SAMD9Q5K651 1589 aa11.06□□□□□ -0.64
SMARCA2-244ENST00000635659 PPRC1Q5VV67 1664 aaKnown RBP11.05□□□□□ -0.64
SMARCA2-244ENST00000635659 USP17L3A6NCW0 530 aa11.05□□□□□ -0.64
SMARCA2-244ENST00000635659 USP17L4A6NCW7 530 aa11.05□□□□□ -0.64
SMARCA2-244ENST00000635659 E9PSI1 815 aa11.05□□□□□ -0.64
SMARCA2-244ENST00000635659 PIK3CDO00329 1044 aa11.05□□□□□ -0.64
SMARCA2-244ENST00000635659 F12P00748 615 aaPredicted RBP11.05□□□□□ -0.64
SMARCA2-244ENST00000635659 TMEM164Q5U3C3 297 aa11.05□□□□□ -0.64
SMARCA2-244ENST00000635659 USP17L2Q6R6M4 530 aa11.05□□□□□ -0.64
SMARCA2-244ENST00000635659 USP17L1Q7RTZ2 530 aa11.05□□□□□ -0.64
SMARCA2-244ENST00000635659 ZFRQ96KR1 1074 aaKnown RBP11.05□□□□□ -0.64
SMARCA2-244ENST00000635659 PRR14Q9BWN1 585 aa11.05□□□□□ -0.64
SMARCA2-244ENST00000635659 KIF21BO75037 1637 aa11.05□□□□□ -0.64
SMARCA2-244ENST00000635659 EEA1Q15075 1411 aa11.04□□□□□ -0.64
SMARCA2-244ENST00000635659 SALL2Q9Y467 1007 aaPredicted RBP11.04□□□□□ -0.64
SMARCA2-244ENST00000635659 TSPOAP1O95153 1857 aa11.04□□□□□ -0.64
SMARCA2-244ENST00000635659 KDM5BQ9UGL1 1544 aa11.04□□□□□ -0.64
SMARCA2-244ENST00000635659 ABCA8O94911 1581 aa11.03□□□□□ -0.64
SMARCA2-244ENST00000635659 USP17L5A8MUK1 530 aa11.03□□□□□ -0.64
SMARCA2-244ENST00000635659 BHMG1C9JSJ3 638 aaPredicted RBP11.03□□□□□ -0.64
SMARCA2-244ENST00000635659 VARS2Q5ST30 1063 aaKnown RBP11.03□□□□□ -0.64
SMARCA2-244ENST00000635659 LCE2DQ5TA82 110 aaPredicted RBP11.03□□□□□ -0.64
SMARCA2-244ENST00000635659 RNF19BQ6ZMZ0 732 aa11.03□□□□□ -0.64
SMARCA2-244ENST00000635659 STK32AQ8WU08 396 aa11.03□□□□□ -0.64
SMARCA2-244ENST00000635659 USB1Q9BQ65 265 aaKnown RBP11.03□□□□□ -0.64
SMARCA2-244ENST00000635659 NOVA2Q9UNW9 492 aaKnown RBP11.03□□□□□ -0.64
SMARCA2-244ENST00000635659 AXIN2Q9Y2T1 843 aa11.03□□□□□ -0.64
SMARCA2-244ENST00000635659 UACAQ9BZF9 1416 aa11.02□□□□□ -0.64
SMARCA2-244ENST00000635659 GOLGA3Q08378 1498 aa11.02□□□□□ -0.65
SMARCA2-244ENST00000635659 SKIP12755 728 aa11.02□□□□□ -0.65
SMARCA2-244ENST00000635659 CCER1Q8TC90 406 aaPredicted RBP11.02□□□□□ -0.65
SMARCA2-244ENST00000635659 ERBB3P21860 1342 aa11.02□□□□□ -0.65
SMARCA2-244ENST00000635659 FAM196BA6NMK8 535 aa11.01□□□□□ -0.65
SMARCA2-244ENST00000635659 BLOC1S3Q6QNY0 202 aa11.01□□□□□ -0.65
SMARCA2-244ENST00000635659 TXNDC2Q86VQ3 553 aa11.01□□□□□ -0.65
SMARCA2-244ENST00000635659 ZNF592Q92610 1267 aa11.01□□□□□ -0.65
SMARCA2-244ENST00000635659 GLI2P10070 1586 aa11.01□□□□□ -0.65
SMARCA2-244ENST00000635659 MAP3K4Q9Y6R4 1608 aa11□□□□□ -0.65
SMARCA2-244ENST00000635659 PTPRNQ16849 979 aa11□□□□□ -0.65
SMARCA2-244ENST00000635659 BRICD5Q6PL45 260 aa11□□□□□ -0.65
SMARCA2-244ENST00000635659 LRCH3Q96II8 777 aa11□□□□□ -0.65
SMARCA2-244ENST00000635659 PLB1Q6P1J6 1458 aa11□□□□□ -0.65
SMARCA2-244ENST00000635659 ASXL2Q76L83 1435 aa10.99□□□□□ -0.65
SMARCA2-244ENST00000635659 USP17L15C9J2P7 530 aa10.98□□□□□ -0.65
SMARCA2-244ENST00000635659 USP17L10C9JJH3 530 aa10.98□□□□□ -0.65
SMARCA2-244ENST00000635659 USP17L13C9JLJ4 530 aa10.98□□□□□ -0.65
SMARCA2-244ENST00000635659 USP17L12C9JPN9 530 aa10.98□□□□□ -0.65
SMARCA2-244ENST00000635659 USP17L11C9JVI0 530 aa10.98□□□□□ -0.65
SMARCA2-244ENST00000635659 USP17L21D6R901 530 aa10.98□□□□□ -0.65
SMARCA2-244ENST00000635659 USP17L18D6R9N7 530 aa10.98□□□□□ -0.65
SMARCA2-244ENST00000635659 USP17L22D6RA61 530 aa10.98□□□□□ -0.65
SMARCA2-244ENST00000635659 USP17L17D6RBQ6 530 aa10.98□□□□□ -0.65
SMARCA2-244ENST00000635659 USP17L19D6RCP7 530 aa10.98□□□□□ -0.65
SMARCA2-244ENST00000635659 USP17L20D6RJB6 530 aa10.98□□□□□ -0.65
SMARCA2-244ENST00000635659 JUNDP17535 347 aa10.98□□□□□ -0.65
SMARCA2-244ENST00000635659 USP17L24Q0WX57 530 aa10.98□□□□□ -0.65
SMARCA2-244ENST00000635659 FAM174AQ8TBP5 190 aa10.98□□□□□ -0.65
SMARCA2-244ENST00000635659 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.98□□□□□ -0.65
SMARCA2-244ENST00000635659 MAP10Q9P2G4 905 aa10.98□□□□□ -0.65
SMARCA2-244ENST00000635659 GPSM3Q9Y4H4 160 aa10.98□□□□□ -0.65
SMARCA2-244ENST00000635659 TK2O00142 265 aa10.97□□□□□ -0.65
SMARCA2-244ENST00000635659 PHLDB3Q6NSJ2 640 aa10.97□□□□□ -0.65
SMARCA2-244ENST00000635659 MRPL50Q8N5N7 158 aaKnown RBP10.97□□□□□ -0.65
SMARCA2-244ENST00000635659 FMNL1O95466 1100 aaPredicted RBP10.96□□□□□ -0.65
SMARCA2-244ENST00000635659 MCCD1P59942 119 aaPredicted RBP10.96□□□□□ -0.65
SMARCA2-244ENST00000635659 CRTC2Q53ET0 693 aaPredicted RBP10.96□□□□□ -0.65
SMARCA2-244ENST00000635659 THAP11Q96EK4 314 aa10.96□□□□□ -0.65
SMARCA2-244ENST00000635659 MKRN1Q9UHC7 482 aaKnown RBP10.96□□□□□ -0.65
SMARCA2-244ENST00000635659 KDM6BO15054 1643 aa10.95□□□□□ -0.66
SMARCA2-244ENST00000635659 EPRSP07814 1512 aaKnown RBP10.95□□□□□ -0.66
SMARCA2-244ENST00000635659 ATP5J2-PTCD1G3V325 749 aa10.95□□□□□ -0.66
SMARCA2-244ENST00000635659 LZTS3O60299 673 aaPredicted RBP10.95□□□□□ -0.66
SMARCA2-244ENST00000635659 SSFA2P28290 1259 aa10.95□□□□□ -0.66
SMARCA2-244ENST00000635659 DEPDC4Q8N2C3 294 aa10.95□□□□□ -0.66
SMARCA2-244ENST00000635659 GPKOWQ92917 476 aaPredicted RBP eCLIP10.95□□□□□ -0.66
SMARCA2-244ENST00000635659 RAPGEF6Q8TEU7 1601 aa10.95□□□□□ -0.66
SMARCA2-244ENST00000635659 TTBK1Q5TCY1 1321 aaPredicted RBP10.94□□□□□ -0.66
SMARCA2-244ENST00000635659 PTK2Q05397 1052 aa10.94□□□□□ -0.66
SMARCA2-244ENST00000635659 PTK7Q13308 1070 aa10.94□□□□□ -0.66
SMARCA2-244ENST00000635659 SLFNL1Q499Z3 407 aa10.94□□□□□ -0.66
SMARCA2-244ENST00000635659 LARP1Q6PKG0 1096 aaKnown RBP10.94□□□□□ -0.66
SMARCA2-244ENST00000635659 ZNF687Q8N1G0 1237 aa10.94□□□□□ -0.66
SMARCA2-244ENST00000635659 CEP126Q9P2H0 1117 aa10.94□□□□□ -0.66
SMARCA2-244ENST00000635659 WDR7Q9Y4E6 1490 aa10.93□□□□□ -0.66
SMARCA2-244ENST00000635659 CFAP43Q8NDM7 1665 aa10.93□□□□□ -0.66
SMARCA2-244ENST00000635659 ARID4AP29374 1257 aaPredicted RBP10.93□□□□□ -0.66
SMARCA2-244ENST00000635659 FAM69CQ0P6D2 419 aa10.93□□□□□ -0.66
SMARCA2-244ENST00000635659 NCOA4Q13772 614 aa10.93□□□□□ -0.66
SMARCA2-244ENST00000635659 PDXDC2PQ6P474 469 aa10.93□□□□□ -0.66
SMARCA2-244ENST00000635659 ARMC2Q8NEN0 867 aa10.93□□□□□ -0.66
SMARCA2-244ENST00000635659 CLP1Q92989 425 aaKnown RBP10.93□□□□□ -0.66
SMARCA2-244ENST00000635659 EFCAB5A4FU69 1503 aa10.93□□□□□ -0.66
SMARCA2-244ENST00000635659 NR1I2O75469 434 aa10.92□□□□□ -0.66
SMARCA2-244ENST00000635659 RASA1P20936 1047 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms