RNA–Protein interactions for RNA: ENST00000629378.2

SPTAN1-219, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-219ENST00000629378 CRB1P82279 1406 aa12.77□□□□□ -0.37
SPTAN1-219ENST00000629378 R3HDM1Q15032 1099 aaKnown RBP12.76□□□□□ -0.37
SPTAN1-219ENST00000629378 NME9Q86XW9 330 aa12.76□□□□□ -0.37
SPTAN1-219ENST00000629378 TTC21AQ8NDW8 1320 aa12.76□□□□□ -0.37
SPTAN1-219ENST00000629378 CD163L1Q9NR16 1453 aa12.76□□□□□ -0.37
SPTAN1-219ENST00000629378 MON2Q7Z3U7 1717 aa12.76□□□□□ -0.37
SPTAN1-219ENST00000629378 KCNH5Q8NCM2 988 aa12.75□□□□□ -0.37
SPTAN1-219ENST00000629378 PARP4Q9UKK3 1724 aaKnown RBP12.75□□□□□ -0.37
SPTAN1-219ENST00000629378 PTF1AQ7RTS3 328 aa12.74□□□□□ -0.37
SPTAN1-219ENST00000629378 NFAT5O94916 1531 aa12.73□□□□□ -0.37
SPTAN1-219ENST00000629378 DISP2A7MBM2 1401 aa12.73□□□□□ -0.37
SPTAN1-219ENST00000629378 SBNO2Q9Y2G9 1366 aa12.73□□□□□ -0.37
SPTAN1-219ENST00000629378 WDR17Q8IZU2 1322 aa12.73□□□□□ -0.37
SPTAN1-219ENST00000629378 ST20-MTHFSA0A0A6YYL1 179 aa12.73□□□□□ -0.37
SPTAN1-219ENST00000629378 CSB-PGBD3P0DP91 1061 aa12.73□□□□□ -0.37
SPTAN1-219ENST00000629378 SBF2Q86WG5 1849 aa12.73□□□□□ -0.37
SPTAN1-219ENST00000629378 WNK3Q9BYP7 1800 aa12.72□□□□□ -0.37
SPTAN1-219ENST00000629378 DDB1Q16531 1140 aa12.72□□□□□ -0.37
SPTAN1-219ENST00000629378 TESK2Q96S53 571 aa12.72□□□□□ -0.37
SPTAN1-219ENST00000629378 LRRC37A3O60309 1634 aa12.72□□□□□ -0.37
SPTAN1-219ENST00000629378 PEAK1Q9H792 1746 aa12.71□□□□□ -0.37
SPTAN1-219ENST00000629378 HDGFL2Q7Z4V5 671 aaPredicted RBP12.71□□□□□ -0.37
SPTAN1-219ENST00000629378 MARCH10Q8NA82 808 aaPredicted RBP12.71□□□□□ -0.37
SPTAN1-219ENST00000629378 LTN1O94822 1766 aa12.71□□□□□ -0.38
SPTAN1-219ENST00000629378 USP31Q70CQ4 1352 aa12.7□□□□□ -0.38
SPTAN1-219ENST00000629378 CARD10Q9BWT7 1032 aa12.7□□□□□ -0.38
SPTAN1-219ENST00000629378 A0A1W2PP64 1363 aa12.69□□□□□ -0.38
SPTAN1-219ENST00000629378 NUP188Q5SRE5 1749 aa12.69□□□□□ -0.38
SPTAN1-219ENST00000629378 ZNF316A6NFI3 1004 aaPredicted RBP12.69□□□□□ -0.38
SPTAN1-219ENST00000629378 FBLN1P23142 703 aa12.69□□□□□ -0.38
SPTAN1-219ENST00000629378 RREB1Q92766 1687 aa12.69□□□□□ -0.38
SPTAN1-219ENST00000629378 LRP5O75197 1615 aa12.69□□□□□ -0.38
SPTAN1-219ENST00000629378 TERF2IPQ9NYB0 399 aa12.68□□□□□ -0.38
SPTAN1-219ENST00000629378 USP54Q70EL1 1684 aa12.67□□□□□ -0.38
SPTAN1-219ENST00000629378 EXOC5O00471 708 aa12.67□□□□□ -0.38
SPTAN1-219ENST00000629378 NLRP2Q9NX02 1062 aa12.67□□□□□ -0.38
SPTAN1-219ENST00000629378 OVOS2A0A0G2JMS6 1433 aa12.67□□□□□ -0.38
SPTAN1-219ENST00000629378 OVOS2A0A0J9YW53 1432 aa12.67□□□□□ -0.38
SPTAN1-219ENST00000629378 OVOS2Q6IE36 1432 aa12.67□□□□□ -0.38
SPTAN1-219ENST00000629378 EDC4Q6P2E9 1401 aaKnown RBP12.67□□□□□ -0.38
SPTAN1-219ENST00000629378 ANKRD24Q8TF21 1146 aa12.66□□□□□ -0.38
SPTAN1-219ENST00000629378 PUS7Q96PZ0 661 aaKnown RBP12.66□□□□□ -0.38
SPTAN1-219ENST00000629378 KCNQ2O43526 872 aa12.65□□□□□ -0.38
SPTAN1-219ENST00000629378 PROM2Q8N271 834 aa12.65□□□□□ -0.38
SPTAN1-219ENST00000629378 LTV1Q96GA3 475 aaPredicted RBP12.65□□□□□ -0.38
SPTAN1-219ENST00000629378 CDCA7Q9BWT1 371 aaPredicted RBP12.65□□□□□ -0.38
SPTAN1-219ENST00000629378 BCL11BQ9C0K0 894 aaPredicted RBP12.65□□□□□ -0.38
SPTAN1-219ENST00000629378 PARD3Q8TEW0 1356 aa12.65□□□□□ -0.38
SPTAN1-219ENST00000629378 ERBB3P21860 1342 aa12.64□□□□□ -0.39
SPTAN1-219ENST00000629378 NBPF14Q5TI25 921 aa12.64□□□□□ -0.39
SPTAN1-219ENST00000629378 CCDC7Q96M83 1385 aa12.64□□□□□ -0.39
SPTAN1-219ENST00000629378 C11orf95C9JLR9 678 aaPredicted RBP12.63□□□□□ -0.39
SPTAN1-219ENST00000629378 PLSCR1O15162 318 aa12.63□□□□□ -0.39
SPTAN1-219ENST00000629378 ACSBG1Q96GR2 724 aa12.63□□□□□ -0.39
SPTAN1-219ENST00000629378 RGPD2P0DJD1 1756 aa12.63□□□□□ -0.39
SPTAN1-219ENST00000629378 KAT6BQ8WYB5 2073 aa12.63□□□□□ -0.39
SPTAN1-219ENST00000629378 USP47Q96K76 1375 aa12.62□□□□□ -0.39
SPTAN1-219ENST00000629378 IP6K1Q92551 441 aa12.62□□□□□ -0.39
SPTAN1-219ENST00000629378 COG3Q96JB2 828 aa12.62□□□□□ -0.39
SPTAN1-219ENST00000629378 PDGFDQ9GZP0 370 aaPredicted RBP12.62□□□□□ -0.39
SPTAN1-219ENST00000629378 ABCC6O95255 1503 aa12.62□□□□□ -0.39
SPTAN1-219ENST00000629378 IL2RBP14784 551 aa12.61□□□□□ -0.39
SPTAN1-219ENST00000629378 TMF1P82094 1093 aa12.61□□□□□ -0.39
SPTAN1-219ENST00000629378 GGNBP2Q9H3C7 697 aa12.61□□□□□ -0.39
SPTAN1-219ENST00000629378 ANO8Q9HCE9 1232 aaPredicted RBP12.61□□□□□ -0.39
SPTAN1-219ENST00000629378 MAP3K19Q56UN5 1328 aa12.61□□□□□ -0.39
SPTAN1-219ENST00000629378 FYB1O15117 783 aa12.6□□□□□ -0.39
SPTAN1-219ENST00000629378 BCL9O00512 1426 aa12.6□□□□□ -0.39
SPTAN1-219ENST00000629378 RGPD3A6NKT7 1758 aaPredicted RBP12.59□□□□□ -0.39
SPTAN1-219ENST00000629378 RGPD4Q7Z3J3 1758 aa12.59□□□□□ -0.39
SPTAN1-219ENST00000629378 HOXC9P31274 260 aa12.59□□□□□ -0.39
SPTAN1-219ENST00000629378 AMPHP49418 695 aa12.59□□□□□ -0.39
SPTAN1-219ENST00000629378 RRS1Q15050 365 aaKnown RBP12.59□□□□□ -0.39
SPTAN1-219ENST00000629378 TXNRD1Q16881 649 aa12.59□□□□□ -0.39
SPTAN1-219ENST00000629378 TNS2Q63HR2 1409 aa12.59□□□□□ -0.39
SPTAN1-219ENST00000629378 ANKRD36BQ8N2N9 1353 aa12.58□□□□□ -0.4
SPTAN1-219ENST00000629378 NINLQ9Y2I6 1382 aa12.58□□□□□ -0.4
SPTAN1-219ENST00000629378 DDX54Q8TDD1 881 aaKnown RBP12.58□□□□□ -0.4
SPTAN1-219ENST00000629378 CARD14Q9BXL6 1004 aa12.58□□□□□ -0.4
SPTAN1-219ENST00000629378 SLC24A1O60721 1099 aa12.57□□□□□ -0.4
SPTAN1-219ENST00000629378 NHSQ6T4R5 1651 aa12.57□□□□□ -0.4
SPTAN1-219ENST00000629378 BTAF1O14981 1849 aa12.56□□□□□ -0.4
SPTAN1-219ENST00000629378 USHBP1Q8N6Y0 703 aa12.56□□□□□ -0.4
SPTAN1-219ENST00000629378 SPON1Q9HCB6 807 aa12.56□□□□□ -0.4
SPTAN1-219ENST00000629378 ZBTB7AO95365 584 aa12.55□□□□□ -0.4
SPTAN1-219ENST00000629378 NBPF6Q5VWK0 638 aa12.55□□□□□ -0.4
SPTAN1-219ENST00000629378 NBPF4Q96M43 638 aa12.55□□□□□ -0.4
SPTAN1-219ENST00000629378 CASZ1Q86V15 1759 aa12.55□□□□□ -0.4
SPTAN1-219ENST00000629378 KIF20BQ96Q89 1820 aa12.55□□□□□ -0.4
SPTAN1-219ENST00000629378 FAM208AQ9UK61 1670 aaKnown RBP12.54□□□□□ -0.4
SPTAN1-219ENST00000629378 HSP90AB2PQ58FF8 381 aa12.54□□□□□ -0.4
SPTAN1-219ENST00000629378 ATF5Q9Y2D1 282 aaPredicted RBP12.54□□□□□ -0.4
SPTAN1-219ENST00000629378 MYOM1P52179 1685 aa12.54□□□□□ -0.4
SPTAN1-219ENST00000629378 KCNQ4P56696 695 aa12.53□□□□□ -0.4
SPTAN1-219ENST00000629378 SLC15A2Q16348 729 aa12.53□□□□□ -0.4
SPTAN1-219ENST00000629378 DIEXFQ68CQ4 756 aaKnown RBP12.53□□□□□ -0.4
SPTAN1-219ENST00000629378 POLR3GLQ9BT43 218 aa12.53□□□□□ -0.4
SPTAN1-219ENST00000629378 LRRC4BQ9NT99 713 aa12.53□□□□□ -0.4
SPTAN1-219ENST00000629378 STK32BQ9NY57 414 aa12.53□□□□□ -0.4
SPTAN1-219ENST00000629378 PPP1R1BQ9UD71 204 aaPredicted RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms