RNA–Protein interactions for RNA: ENST00000629047.1

SPTAN1-216, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-216ENST00000629047 SPTLC1O15269 473 aa3.82□□□□□ -1.8
SPTAN1-216ENST00000629047 AGERQ15109 404 aa3.82□□□□□ -1.8
SPTAN1-216ENST00000629047 FOXD4L6Q3SYB3 417 aaPredicted RBP3.82□□□□□ -1.8
SPTAN1-216ENST00000629047 FOXD4L3Q6VB84 417 aaPredicted RBP3.82□□□□□ -1.8
SPTAN1-216ENST00000629047 NEDD1Q8NHV4 660 aa3.82□□□□□ -1.8
SPTAN1-216ENST00000629047 FAM217BQ9NTX9 383 aaPredicted RBP3.82□□□□□ -1.8
SPTAN1-216ENST00000629047 CFAP99D6REC4 459 aa3.81□□□□□ -1.8
SPTAN1-216ENST00000629047 F12P00748 615 aaPredicted RBP3.81□□□□□ -1.8
SPTAN1-216ENST00000629047 RELBQ01201 579 aa3.81□□□□□ -1.8
SPTAN1-216ENST00000629047 NUTM1Q86Y26 1132 aa3.81□□□□□ -1.8
SPTAN1-216ENST00000629047 RNF217Q8TC41 542 aa3.81□□□□□ -1.8
SPTAN1-216ENST00000629047 C1QTNF2Q9BXJ5 285 aa3.81□□□□□ -1.8
SPTAN1-216ENST00000629047 PPP1R26Q5T8A7 1209 aaPredicted RBP3.8□□□□□ -1.8
SPTAN1-216ENST00000629047 VASH1Q7L8A9 365 aaPredicted RBP3.8□□□□□ -1.8
SPTAN1-216ENST00000629047 PODNQ7Z5L7 613 aa3.8□□□□□ -1.8
SPTAN1-216ENST00000629047 GPIHBP1Q8IV16 184 aa3.8□□□□□ -1.8
SPTAN1-216ENST00000629047 CCDC116Q8IYX3 515 aa3.8□□□□□ -1.8
SPTAN1-216ENST00000629047 BEND7Q8N7W2 519 aaPredicted RBP3.8□□□□□ -1.8
SPTAN1-216ENST00000629047 SUV39H2Q9H5I1 410 aa3.8□□□□□ -1.8
SPTAN1-216ENST00000629047 PER1O15534 1290 aaPredicted RBP3.79□□□□□ -1.8
SPTAN1-216ENST00000629047 BCRP11274 1271 aa3.79□□□□□ -1.8
SPTAN1-216ENST00000629047 RHOQP17081 205 aa3.79□□□□□ -1.8
SPTAN1-216ENST00000629047 FOXD4L5Q5VV16 416 aaPredicted RBP3.79□□□□□ -1.8
SPTAN1-216ENST00000629047 Q6ZVU0 165 aa3.79□□□□□ -1.8
SPTAN1-216ENST00000629047 SPIRE2Q8WWL2 714 aa3.79□□□□□ -1.8
SPTAN1-216ENST00000629047 ZNF837Q96EG3 531 aaPredicted RBP3.79□□□□□ -1.8
SPTAN1-216ENST00000629047 ZNF395Q9H8N7 513 aaPredicted RBP3.79□□□□□ -1.8
SPTAN1-216ENST00000629047 POLMQ9NP87 494 aaPredicted RBP3.79□□□□□ -1.8
SPTAN1-216ENST00000629047 MAGEB6P1A0A0J9YX57 407 aa3.78□□□□□ -1.8
SPTAN1-216ENST00000629047 BTBD11A6QL63 1104 aa3.78□□□□□ -1.8
SPTAN1-216ENST00000629047 SHISA8B8ZZ34 492 aa3.78□□□□□ -1.8
SPTAN1-216ENST00000629047 MAP2K5Q13163 448 aa3.78□□□□□ -1.8
SPTAN1-216ENST00000629047 ZMYM1Q5SVZ6 1142 aa3.78□□□□□ -1.8
SPTAN1-216ENST00000629047 LYPD8Q6UX82 237 aa3.78□□□□□ -1.8
SPTAN1-216ENST00000629047 CCDC102AQ96A19 550 aa3.78□□□□□ -1.8
SPTAN1-216ENST00000629047 CARD14Q9BXL6 1004 aa3.78□□□□□ -1.8
SPTAN1-216ENST00000629047 ENAMQ9NRM1 1142 aa3.78□□□□□ -1.8
SPTAN1-216ENST00000629047 MBIPQ9NS73 344 aa3.78□□□□□ -1.8
SPTAN1-216ENST00000629047 EMILIN1Q9Y6C2 1016 aa3.78□□□□□ -1.8
SPTAN1-216ENST00000629047 CHRNA4P43681 627 aa3.77□□□□□ -1.81
SPTAN1-216ENST00000629047 MTMR2Q13614 643 aa3.77□□□□□ -1.81
SPTAN1-216ENST00000629047 GRIN2CQ14957 1233 aa3.77□□□□□ -1.81
SPTAN1-216ENST00000629047 C1orf229Q6ZS94 237 aaPredicted RBP3.77□□□□□ -1.81
SPTAN1-216ENST00000629047 SEMA6BQ9H3T3 888 aa3.77□□□□□ -1.81
SPTAN1-216ENST00000629047 C1QTNF9BB2RNN3 333 aa3.76□□□□□ -1.81
SPTAN1-216ENST00000629047 IRF6O14896 467 aa3.76□□□□□ -1.81
SPTAN1-216ENST00000629047 DOC2BQ14184 412 aa3.76□□□□□ -1.81
SPTAN1-216ENST00000629047 BPHLQ86WA6 291 aaPredicted RBP3.76□□□□□ -1.81
SPTAN1-216ENST00000629047 GTPBP3Q969Y2 492 aaKnown RBP3.76□□□□□ -1.81
SPTAN1-216ENST00000629047 KRTAP4-7Q9BYR0 210 aa3.76□□□□□ -1.81
SPTAN1-216ENST00000629047 GPCPD1Q9NPB8 672 aa3.76□□□□□ -1.81
SPTAN1-216ENST00000629047 MAP4K5Q9Y4K4 846 aa3.76□□□□□ -1.81
SPTAN1-216ENST00000629047 PCDHB15Q9Y5E8 787 aa3.76□□□□□ -1.81
SPTAN1-216ENST00000629047 DBN1Q16643 649 aa3.75□□□□□ -1.81
SPTAN1-216ENST00000629047 DESI1Q6ICB0 168 aa3.75□□□□□ -1.81
SPTAN1-216ENST00000629047 SH3BP5LQ7L8J4 393 aa3.75□□□□□ -1.81
SPTAN1-216ENST00000629047 CD163Q86VB7 1156 aa3.75□□□□□ -1.81
SPTAN1-216ENST00000629047 CABLES1Q8TDN4 633 aa3.75□□□□□ -1.81
SPTAN1-216ENST00000629047 SCO2A0A1W2PP80 73 aa3.74□□□□□ -1.81
SPTAN1-216ENST00000629047 OIP5O43482 229 aa3.74□□□□□ -1.81
SPTAN1-216ENST00000629047 HOXB4P17483 251 aaPredicted RBP3.74□□□□□ -1.81
SPTAN1-216ENST00000629047 ERFEQ4G0M1 354 aa3.74□□□□□ -1.81
SPTAN1-216ENST00000629047 TRMT44Q8IYL2 757 aaKnown RBP3.74□□□□□ -1.81
SPTAN1-216ENST00000629047 KDF1Q8NAX2 398 aaPredicted RBP3.74□□□□□ -1.81
SPTAN1-216ENST00000629047 TMPRSS4Q9NRS4 437 aa3.74□□□□□ -1.81
SPTAN1-216ENST00000629047 INTS6LQ5JSJ4 861 aaKnown RBP3.73□□□□□ -1.81
SPTAN1-216ENST00000629047 PRICKLE2Q7Z3G6 844 aa3.73□□□□□ -1.81
SPTAN1-216ENST00000629047 P3H3Q8IVL6 736 aa3.73□□□□□ -1.81
SPTAN1-216ENST00000629047 HRCP23327 699 aa3.72□□□□□ -1.81
SPTAN1-216ENST00000629047 CLCN1P35523 988 aa3.72□□□□□ -1.81
SPTAN1-216ENST00000629047 ADD1P35611 737 aaKnown RBP3.72□□□□□ -1.81
SPTAN1-216ENST00000629047 RIPOR1Q6ZS17 1223 aa3.72□□□□□ -1.81
SPTAN1-216ENST00000629047 TRIM22Q8IYM9 498 aa3.72□□□□□ -1.81
SPTAN1-216ENST00000629047 RRAGCQ9HB90 399 aa3.72□□□□□ -1.81
SPTAN1-216ENST00000629047 PGPEP1Q9NXJ5 209 aa3.72□□□□□ -1.81
SPTAN1-216ENST00000629047 THBS1P07996 1170 aa3.71□□□□□ -1.82
SPTAN1-216ENST00000629047 SSTR3P32745 418 aaPredicted RBP3.71□□□□□ -1.82
SPTAN1-216ENST00000629047 CSPP1Q1MSJ5 1256 aa3.71□□□□□ -1.82
SPTAN1-216ENST00000629047 PRPF38BQ5VTL8 546 aaKnown RBP3.71□□□□□ -1.82
SPTAN1-216ENST00000629047 SMYD5Q6GMV2 418 aa3.71□□□□□ -1.82
SPTAN1-216ENST00000629047 LINC00114Q6XXX2 140 aa3.71□□□□□ -1.82
SPTAN1-216ENST00000629047 LYSMD3Q7Z3D4 306 aa3.71□□□□□ -1.82
SPTAN1-216ENST00000629047 TSC1Q92574 1164 aa3.71□□□□□ -1.82
SPTAN1-216ENST00000629047 MKL2Q9ULH7 1088 aa3.71□□□□□ -1.82
SPTAN1-216ENST00000629047 ADH1AP07327 375 aa3.7□□□□□ -1.82
SPTAN1-216ENST00000629047 MX2P20592 715 aa3.7□□□□□ -1.82
SPTAN1-216ENST00000629047 RAB15P59190 212 aa3.7□□□□□ -1.82
SPTAN1-216ENST00000629047 LCE1DQ5T752 114 aa3.7□□□□□ -1.82
SPTAN1-216ENST00000629047 RSBN1LQ6PCB5 846 aaPredicted RBP3.7□□□□□ -1.82
SPTAN1-216ENST00000629047 ZNF784Q8NCA9 323 aaPredicted RBP3.7□□□□□ -1.82
SPTAN1-216ENST00000629047 KCTD15Q96SI1 283 aaPredicted RBP3.7□□□□□ -1.82
SPTAN1-216ENST00000629047 OXCT2Q9BYC2 517 aaPredicted RBP3.7□□□□□ -1.82
SPTAN1-216ENST00000629047 SPDYE5A6NIY4 337 aa3.69□□□□□ -1.82
SPTAN1-216ENST00000629047 LILRA1O75019 489 aa3.69□□□□□ -1.82
SPTAN1-216ENST00000629047 RSPO4Q2I0M5 234 aaPredicted RBP3.69□□□□□ -1.82
SPTAN1-216ENST00000629047 GAS2L1Q99501 681 aaPredicted RBP3.69□□□□□ -1.82
SPTAN1-216ENST00000629047 GOLGA2P5Q9HBQ8 144 aa3.69□□□□□ -1.82
SPTAN1-216ENST00000629047 PTGIRP43119 386 aa3.68□□□□□ -1.82
SPTAN1-216ENST00000629047 QPCTQ16769 361 aa3.68□□□□□ -1.82
SPTAN1-216ENST00000629047 OCSTAMPQ9BR26 566 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms