RNA–Protein interactions for RNA: ENST00000628516.1

LINC00628-201, long intergenic non-protein coding RNA 628, humanhuman

BASIC

Gene LINC00628, Length 1,289 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00628-201ENST00000628516 WDR17Q8IZU2 1322 aa23.15■■□□□ 1.3
LINC00628-201ENST00000628516 TESK2Q96S53 571 aa23.15■■□□□ 1.3
LINC00628-201ENST00000628516 TERF2IPQ9NYB0 399 aa23.15■■□□□ 1.3
LINC00628-201ENST00000628516 DISP2A7MBM2 1401 aa23.15■■□□□ 1.3
LINC00628-201ENST00000628516 TNS1Q9HBL0 1735 aaKnown RBP23.14■■□□□ 1.3
LINC00628-201ENST00000628516 CSB-PGBD3P0DP91 1061 aa23.14■■□□□ 1.29
LINC00628-201ENST00000628516 USP31Q70CQ4 1352 aa23.14■■□□□ 1.29
LINC00628-201ENST00000628516 NFAT5O94916 1531 aa23.13■■□□□ 1.29
LINC00628-201ENST00000628516 APBA3O96018 575 aa23.13■■□□□ 1.29
LINC00628-201ENST00000628516 EZH2Q15910 746 aaKnown RBP23.13■■□□□ 1.29
LINC00628-201ENST00000628516 PARP4Q9UKK3 1724 aaKnown RBP23.13■■□□□ 1.29
LINC00628-201ENST00000628516 A0A1W2PP64 1363 aa23.13■■□□□ 1.29
LINC00628-201ENST00000628516 PSDA5PKW4 1024 aaPredicted RBP23.12■■□□□ 1.29
LINC00628-201ENST00000628516 SLC24A1O60721 1099 aa23.12■■□□□ 1.29
LINC00628-201ENST00000628516 EDC4Q6P2E9 1401 aaKnown RBP23.12■■□□□ 1.29
LINC00628-201ENST00000628516 DDB1Q16531 1140 aa23.11■■□□□ 1.29
LINC00628-201ENST00000628516 CAMKK2Q96RR4 588 aa23.1■■□□□ 1.29
LINC00628-201ENST00000628516 RGPD5Q99666 1765 aa23.09■■□□□ 1.29
LINC00628-201ENST00000628516 CARD10Q9BWT7 1032 aa23.09■■□□□ 1.29
LINC00628-201ENST00000628516 C11orf95C9JLR9 678 aaPredicted RBP23.08■■□□□ 1.29
LINC00628-201ENST00000628516 CDCA7Q9BWT1 371 aaPredicted RBP23.08■■□□□ 1.29
LINC00628-201ENST00000628516 NINLQ9Y2I6 1382 aa23.07■■□□□ 1.28
LINC00628-201ENST00000628516 OVOS2A0A0G2JMS6 1433 aa23.07■■□□□ 1.28
LINC00628-201ENST00000628516 OVOS2A0A0J9YW53 1432 aa23.07■■□□□ 1.28
LINC00628-201ENST00000628516 OVOS2Q6IE36 1432 aa23.07■■□□□ 1.28
LINC00628-201ENST00000628516 USP54Q70EL1 1684 aa23.06■■□□□ 1.28
LINC00628-201ENST00000628516 USP47Q96K76 1375 aa23.06■■□□□ 1.28
LINC00628-201ENST00000628516 LRRC37A3O60309 1634 aa23.06■■□□□ 1.28
LINC00628-201ENST00000628516 ABCC6O95255 1503 aa23.06■■□□□ 1.28
LINC00628-201ENST00000628516 PARD3Q8TEW0 1356 aa23.05■■□□□ 1.28
LINC00628-201ENST00000628516 TMF1P82094 1093 aa23.04■■□□□ 1.28
LINC00628-201ENST00000628516 R3HDM1Q15032 1099 aaKnown RBP23.04■■□□□ 1.28
LINC00628-201ENST00000628516 CCDC7Q96M83 1385 aa23.03■■□□□ 1.28
LINC00628-201ENST00000628516 WNK3Q9BYP7 1800 aa23.03■■□□□ 1.28
LINC00628-201ENST00000628516 CCER1Q8TC90 406 aaPredicted RBP23.02■■□□□ 1.28
LINC00628-201ENST00000628516 ERBB3P21860 1342 aa23.02■■□□□ 1.28
LINC00628-201ENST00000628516 EXOC5O00471 708 aa23.01■■□□□ 1.27
LINC00628-201ENST00000628516 MARCH10Q8NA82 808 aaPredicted RBP23.01■■□□□ 1.27
LINC00628-201ENST00000628516 NLRP2Q9NX02 1062 aa23.01■■□□□ 1.27
LINC00628-201ENST00000628516 PEAK1Q9H792 1746 aa23.01■■□□□ 1.27
LINC00628-201ENST00000628516 LTN1O94822 1766 aa23.01■■□□□ 1.27
LINC00628-201ENST00000628516 TIMELESSQ9UNS1 1208 aa23■■□□□ 1.27
LINC00628-201ENST00000628516 ANKRD24Q8TF21 1146 aa22.99■■□□□ 1.27
LINC00628-201ENST00000628516 COG3Q96JB2 828 aa22.99■■□□□ 1.27
LINC00628-201ENST00000628516 CLSPNQ9HAW4 1339 aa22.99■■□□□ 1.27
LINC00628-201ENST00000628516 ANKRD36BQ8N2N9 1353 aa22.99■■□□□ 1.27
LINC00628-201ENST00000628516 CDCA8Q53HL2 280 aa22.96■■□□□ 1.27
LINC00628-201ENST00000628516 NBPF14Q5TI25 921 aa22.96■■□□□ 1.27
LINC00628-201ENST00000628516 BCL11BQ9C0K0 894 aaPredicted RBP22.96■■□□□ 1.27
LINC00628-201ENST00000628516 LRP5O75197 1615 aa22.96■■□□□ 1.27
LINC00628-201ENST00000628516 RREB1Q92766 1687 aa22.96■■□□□ 1.27
LINC00628-201ENST00000628516 IP6K1Q92551 441 aa22.95■■□□□ 1.26
LINC00628-201ENST00000628516 SBF2Q86WG5 1849 aa22.94■■□□□ 1.26
LINC00628-201ENST00000628516 BCL9O00512 1426 aa22.94■■□□□ 1.26
LINC00628-201ENST00000628516 PTF1AQ7RTS3 328 aa22.94■■□□□ 1.26
LINC00628-201ENST00000628516 TNS2Q63HR2 1409 aa22.93■■□□□ 1.26
LINC00628-201ENST00000628516 PLSCR1O15162 318 aa22.93■■□□□ 1.26
LINC00628-201ENST00000628516 IL2RBP14784 551 aa22.93■■□□□ 1.26
LINC00628-201ENST00000628516 LTV1Q96GA3 475 aaPredicted RBP22.93■■□□□ 1.26
LINC00628-201ENST00000628516 NUP188Q5SRE5 1749 aa22.93■■□□□ 1.26
LINC00628-201ENST00000628516 FBLN1P23142 703 aa22.92■■□□□ 1.26
LINC00628-201ENST00000628516 MAP3K19Q56UN5 1328 aa22.91■■□□□ 1.26
LINC00628-201ENST00000628516 AMPHP49418 695 aa22.91■■□□□ 1.26
LINC00628-201ENST00000628516 FYB1O15117 783 aa22.9■■□□□ 1.26
LINC00628-201ENST00000628516 GGNBP2Q9H3C7 697 aa22.9■■□□□ 1.26
LINC00628-201ENST00000628516 HOXC9P31274 260 aa22.89■■□□□ 1.25
LINC00628-201ENST00000628516 RGPD3A6NKT7 1758 aaPredicted RBP22.86■■□□□ 1.25
LINC00628-201ENST00000628516 RGPD4Q7Z3J3 1758 aa22.86■■□□□ 1.25
LINC00628-201ENST00000628516 KCNQ2O43526 872 aa22.86■■□□□ 1.25
LINC00628-201ENST00000628516 RRS1Q15050 365 aaKnown RBP22.86■■□□□ 1.25
LINC00628-201ENST00000628516 ACSBG1Q96GR2 724 aa22.86■■□□□ 1.25
LINC00628-201ENST00000628516 PROM2Q8N271 834 aa22.84■■□□□ 1.25
LINC00628-201ENST00000628516 FAM208AQ9UK61 1670 aaKnown RBP22.83■■□□□ 1.24
LINC00628-201ENST00000628516 RTL1A6NKG5 1358 aa22.82■■□□□ 1.24
LINC00628-201ENST00000628516 TXNRD1Q16881 649 aa22.81■■□□□ 1.24
LINC00628-201ENST00000628516 CARD14Q9BXL6 1004 aa22.81■■□□□ 1.24
LINC00628-201ENST00000628516 ANO8Q9HCE9 1232 aaPredicted RBP22.81■■□□□ 1.24
LINC00628-201ENST00000628516 DDX54Q8TDD1 881 aaKnown RBP22.8■■□□□ 1.24
LINC00628-201ENST00000628516 POLR3GLQ9BT43 218 aa22.8■■□□□ 1.24
LINC00628-201ENST00000628516 NSD3Q9BZ95 1437 aa22.8■■□□□ 1.24
LINC00628-201ENST00000628516 MYOM1P52179 1685 aa22.79■■□□□ 1.24
LINC00628-201ENST00000628516 NHSQ6T4R5 1651 aa22.79■■□□□ 1.24
LINC00628-201ENST00000628516 KIF20BQ96Q89 1820 aa22.79■■□□□ 1.24
LINC00628-201ENST00000628516 SMG6Q86US8 1419 aaKnown RBP22.76■■□□□ 1.23
LINC00628-201ENST00000628516 NBPF6Q5VWK0 638 aa22.76■■□□□ 1.23
LINC00628-201ENST00000628516 NBPF4Q96M43 638 aa22.76■■□□□ 1.23
LINC00628-201ENST00000628516 SPON1Q9HCB6 807 aa22.76■■□□□ 1.23
LINC00628-201ENST00000628516 RGPD2P0DJD1 1756 aa22.76■■□□□ 1.23
LINC00628-201ENST00000628516 KAT6BQ8WYB5 2073 aa22.75■■□□□ 1.23
LINC00628-201ENST00000628516 EIF4G2P78344 907 aaKnown RBP eCLIP22.75■■□□□ 1.23
LINC00628-201ENST00000628516 HSP90AB2PQ58FF8 381 aa22.75■■□□□ 1.23
LINC00628-201ENST00000628516 STK32BQ9NY57 414 aa22.75■■□□□ 1.23
LINC00628-201ENST00000628516 USHBP1Q8N6Y0 703 aa22.74■■□□□ 1.23
LINC00628-201ENST00000628516 ZCRB1Q8TBF4 217 aaKnown RBP22.74■■□□□ 1.23
LINC00628-201ENST00000628516 FLT4P35916 1363 aa22.74■■□□□ 1.23
LINC00628-201ENST00000628516 HSPA5P11021 654 aaKnown RBP22.73■■□□□ 1.23
LINC00628-201ENST00000628516 INSRP06213 1382 aa22.73■■□□□ 1.23
LINC00628-201ENST00000628516 MEGF6O75095 1541 aa22.72■■□□□ 1.23
LINC00628-201ENST00000628516 SLC15A2Q16348 729 aa22.72■■□□□ 1.23
LINC00628-201ENST00000628516 PPP1R1BQ9UD71 204 aaPredicted RBP22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms