RNA–Protein interactions for RNA: ENST00000627960.1

UBR1-212, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 5 BASIC

Gene UBR1, Length 189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-212ENST00000627960 SOX12O15370 315 aa17.08■□□□□ 0.32
UBR1-212ENST00000627960 SLC24A1O60721 1099 aa17.08■□□□□ 0.32
UBR1-212ENST00000627960 TERF2IPQ9NYB0 399 aa17.08■□□□□ 0.32
UBR1-212ENST00000627960 WDR17Q8IZU2 1322 aa17.06■□□□□ 0.32
UBR1-212ENST00000627960 EN1Q05925 392 aaPredicted RBP17.06■□□□□ 0.32
UBR1-212ENST00000627960 TOM1L2Q6ZVM7 507 aa17.06■□□□□ 0.32
UBR1-212ENST00000627960 NME9Q86XW9 330 aa17.06■□□□□ 0.32
UBR1-212ENST00000627960 EDC4Q6P2E9 1401 aaKnown RBP17.05■□□□□ 0.32
UBR1-212ENST00000627960 A0A1W2PP64 1363 aa17.05■□□□□ 0.32
UBR1-212ENST00000627960 TRIM37O94972 964 aa17.05■□□□□ 0.32
UBR1-212ENST00000627960 DISP2A7MBM2 1401 aa17.04■□□□□ 0.32
UBR1-212ENST00000627960 TIMELESSQ9UNS1 1208 aa17.04■□□□□ 0.32
UBR1-212ENST00000627960 WNK3Q9BYP7 1800 aa17.04■□□□□ 0.32
UBR1-212ENST00000627960 NINLQ9Y2I6 1382 aa17.03■□□□□ 0.32
UBR1-212ENST00000627960 LTN1O94822 1766 aa17.03■□□□□ 0.32
UBR1-212ENST00000627960 ABCC6O95255 1503 aa17.03■□□□□ 0.32
UBR1-212ENST00000627960 PCGF6Q9BYE7 350 aa17.03■□□□□ 0.32
UBR1-212ENST00000627960 USP47Q96K76 1375 aa17.02■□□□□ 0.32
UBR1-212ENST00000627960 CLSPNQ9HAW4 1339 aa17.02■□□□□ 0.32
UBR1-212ENST00000627960 CSB-PGBD3P0DP91 1061 aa17.02■□□□□ 0.32
UBR1-212ENST00000627960 CARD10Q9BWT7 1032 aa17.02■□□□□ 0.32
UBR1-212ENST00000627960 LRRC37A3O60309 1634 aa17.01■□□□□ 0.31
UBR1-212ENST00000627960 APBA3O96018 575 aa17.01■□□□□ 0.31
UBR1-212ENST00000627960 C11orf95C9JLR9 678 aaPredicted RBP17■□□□□ 0.31
UBR1-212ENST00000627960 TMF1P82094 1093 aa17■□□□□ 0.31
UBR1-212ENST00000627960 EZH2Q15910 746 aaKnown RBP17■□□□□ 0.31
UBR1-212ENST00000627960 DDB1Q16531 1140 aa17■□□□□ 0.31
UBR1-212ENST00000627960 CAMKK2Q96RR4 588 aa17■□□□□ 0.31
UBR1-212ENST00000627960 CDCA7Q9BWT1 371 aaPredicted RBP17■□□□□ 0.31
UBR1-212ENST00000627960 PEAK1Q9H792 1746 aa17■□□□□ 0.31
UBR1-212ENST00000627960 SBF2Q86WG5 1849 aa16.99■□□□□ 0.31
UBR1-212ENST00000627960 OVOS2A0A0J9YW53 1432 aa16.98■□□□□ 0.31
UBR1-212ENST00000627960 OVOS2Q6IE36 1432 aa16.98■□□□□ 0.31
UBR1-212ENST00000627960 OVOS2A0A0G2JMS6 1433 aa16.97■□□□□ 0.31
UBR1-212ENST00000627960 PSDA5PKW4 1024 aaPredicted RBP16.97■□□□□ 0.31
UBR1-212ENST00000627960 PARD3Q8TEW0 1356 aa16.97■□□□□ 0.31
UBR1-212ENST00000627960 CCDC7Q96M83 1385 aa16.97■□□□□ 0.31
UBR1-212ENST00000627960 SRCAPQ6ZRS2 3230 aa16.96■□□□□ 0.31
UBR1-212ENST00000627960 ANKRD36BQ8N2N9 1353 aa16.96■□□□□ 0.31
UBR1-212ENST00000627960 RREB1Q92766 1687 aa16.96■□□□□ 0.31
UBR1-212ENST00000627960 ERBB3P21860 1342 aa16.96■□□□□ 0.3
UBR1-212ENST00000627960 CDCA8Q53HL2 280 aa16.95■□□□□ 0.3
UBR1-212ENST00000627960 MARCH10Q8NA82 808 aaPredicted RBP16.95■□□□□ 0.3
UBR1-212ENST00000627960 EXOC5O00471 708 aa16.94■□□□□ 0.3
UBR1-212ENST00000627960 COG3Q96JB2 828 aa16.94■□□□□ 0.3
UBR1-212ENST00000627960 R3HDM1Q15032 1099 aaKnown RBP16.93■□□□□ 0.3
UBR1-212ENST00000627960 ANKRD24Q8TF21 1146 aa16.93■□□□□ 0.3
UBR1-212ENST00000627960 IP6K1Q92551 441 aa16.93■□□□□ 0.3
UBR1-212ENST00000627960 NLRP2Q9NX02 1062 aa16.93■□□□□ 0.3
UBR1-212ENST00000627960 NUP188Q5SRE5 1749 aa16.93■□□□□ 0.3
UBR1-212ENST00000627960 BCL9O00512 1426 aa16.92■□□□□ 0.3
UBR1-212ENST00000627960 LRP5O75197 1615 aa16.92■□□□□ 0.3
UBR1-212ENST00000627960 BCL11BQ9C0K0 894 aaPredicted RBP16.91■□□□□ 0.3
UBR1-212ENST00000627960 RGPD3A6NKT7 1758 aaPredicted RBP16.9■□□□□ 0.3
UBR1-212ENST00000627960 RGPD4Q7Z3J3 1758 aa16.9■□□□□ 0.3
UBR1-212ENST00000627960 FYB1O15117 783 aa16.9■□□□□ 0.3
UBR1-212ENST00000627960 FAM208AQ9UK61 1670 aaKnown RBP16.89■□□□□ 0.29
UBR1-212ENST00000627960 PLSCR1O15162 318 aa16.89■□□□□ 0.29
UBR1-212ENST00000627960 IL2RBP14784 551 aa16.89■□□□□ 0.29
UBR1-212ENST00000627960 FBLN1P23142 703 aa16.89■□□□□ 0.29
UBR1-212ENST00000627960 PTF1AQ7RTS3 328 aa16.89■□□□□ 0.29
UBR1-212ENST00000627960 MAP3K19Q56UN5 1328 aa16.89■□□□□ 0.29
UBR1-212ENST00000627960 TNS2Q63HR2 1409 aa16.88■□□□□ 0.29
UBR1-212ENST00000627960 MYOM1P52179 1685 aa16.88■□□□□ 0.29
UBR1-212ENST00000627960 NBPF14Q5TI25 921 aa16.88■□□□□ 0.29
UBR1-212ENST00000627960 CCER1Q8TC90 406 aaPredicted RBP16.88■□□□□ 0.29
UBR1-212ENST00000627960 KIF20BQ96Q89 1820 aa16.88■□□□□ 0.29
UBR1-212ENST00000627960 HOXC9P31274 260 aa16.87■□□□□ 0.29
UBR1-212ENST00000627960 AMPHP49418 695 aa16.87■□□□□ 0.29
UBR1-212ENST00000627960 LTV1Q96GA3 475 aaPredicted RBP16.87■□□□□ 0.29
UBR1-212ENST00000627960 GGNBP2Q9H3C7 697 aa16.87■□□□□ 0.29
UBR1-212ENST00000627960 RGPD2P0DJD1 1756 aa16.86■□□□□ 0.29
UBR1-212ENST00000627960 KAT6BQ8WYB5 2073 aa16.85■□□□□ 0.29
UBR1-212ENST00000627960 CARD14Q9BXL6 1004 aa16.85■□□□□ 0.29
UBR1-212ENST00000627960 RTL1A6NKG5 1358 aa16.84■□□□□ 0.29
UBR1-212ENST00000627960 RRS1Q15050 365 aaKnown RBP16.83■□□□□ 0.28
UBR1-212ENST00000627960 NHSQ6T4R5 1651 aa16.83■□□□□ 0.28
UBR1-212ENST00000627960 KCNQ2O43526 872 aa16.82■□□□□ 0.28
UBR1-212ENST00000627960 PROM2Q8N271 834 aa16.82■□□□□ 0.28
UBR1-212ENST00000627960 NSD3Q9BZ95 1437 aa16.81■□□□□ 0.28
UBR1-212ENST00000627960 EIF4G2P78344 907 aaKnown RBP eCLIP16.8■□□□□ 0.28
UBR1-212ENST00000627960 ACSBG1Q96GR2 724 aa16.8■□□□□ 0.28
UBR1-212ENST00000627960 HSPA5P11021 654 aaKnown RBP16.79■□□□□ 0.28
UBR1-212ENST00000627960 TXNRD1Q16881 649 aa16.79■□□□□ 0.28
UBR1-212ENST00000627960 BTAF1O14981 1849 aa16.78■□□□□ 0.28
UBR1-212ENST00000627960 NBPF6Q5VWK0 638 aa16.78■□□□□ 0.28
UBR1-212ENST00000627960 DDX54Q8TDD1 881 aaKnown RBP16.78■□□□□ 0.28
UBR1-212ENST00000627960 NBPF4Q96M43 638 aa16.78■□□□□ 0.28
UBR1-212ENST00000627960 KIF24Q5T7B8 1368 aa16.77■□□□□ 0.28
UBR1-212ENST00000627960 MAP2P11137 1827 aaKnown RBP16.77■□□□□ 0.28
UBR1-212ENST00000627960 SHANK3Q9BYB0 1731 aa16.77■□□□□ 0.28
UBR1-212ENST00000627960 HSP90AB2PQ58FF8 381 aa16.77■□□□□ 0.28
UBR1-212ENST00000627960 POLR3GLQ9BT43 218 aa16.77■□□□□ 0.28
UBR1-212ENST00000627960 ANO8Q9HCE9 1232 aaPredicted RBP16.77■□□□□ 0.28
UBR1-212ENST00000627960 INSRP06213 1382 aa16.77■□□□□ 0.27
UBR1-212ENST00000627960 FLT4P35916 1363 aa16.77■□□□□ 0.27
UBR1-212ENST00000627960 ZCRB1Q8TBF4 217 aaKnown RBP16.76■□□□□ 0.27
UBR1-212ENST00000627960 SMG6Q86US8 1419 aaKnown RBP16.76■□□□□ 0.27
UBR1-212ENST00000627960 CGNL1Q0VF96 1302 aa16.75■□□□□ 0.27
UBR1-212ENST00000627960 MEGF6O75095 1541 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms