RNA–Protein interactions for RNA: ENST00000627809.1

SPTAN1-213, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 3

Gene SPTAN1, Length 342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-213ENST00000627809 CARD14Q9BXL6 1004 aa11.43□□□□□ -0.58
SPTAN1-213ENST00000627809 ANKRD26Q9UPS8 1709 aa11.43□□□□□ -0.58
SPTAN1-213ENST00000627809 EDC4Q6P2E9 1401 aaKnown RBP11.43□□□□□ -0.58
SPTAN1-213ENST00000627809 USP31Q70CQ4 1352 aa11.42□□□□□ -0.58
SPTAN1-213ENST00000627809 MAP2P11137 1827 aaKnown RBP11.42□□□□□ -0.58
SPTAN1-213ENST00000627809 ARHGEF25Q86VW2 580 aa11.42□□□□□ -0.58
SPTAN1-213ENST00000627809 NUP188Q5SRE5 1749 aa11.42□□□□□ -0.58
SPTAN1-213ENST00000627809 RREB1Q92766 1687 aa11.42□□□□□ -0.58
SPTAN1-213ENST00000627809 HSPA5P11021 654 aaKnown RBP11.41□□□□□ -0.58
SPTAN1-213ENST00000627809 NLRP13Q86W25 1043 aa11.41□□□□□ -0.58
SPTAN1-213ENST00000627809 AATKQ6ZMQ8 1374 aa11.41□□□□□ -0.58
SPTAN1-213ENST00000627809 DISP2A7MBM2 1401 aa11.4□□□□□ -0.58
SPTAN1-213ENST00000627809 TTC21AQ8NDW8 1320 aa11.39□□□□□ -0.59
SPTAN1-213ENST00000627809 A0A0G2JS52 829 aa11.39□□□□□ -0.59
SPTAN1-213ENST00000627809 MYT1Q01538 1121 aa11.39□□□□□ -0.59
SPTAN1-213ENST00000627809 KRT27Q7Z3Y8 459 aa11.39□□□□□ -0.59
SPTAN1-213ENST00000627809 ANKRD36BQ8N2N9 1353 aa11.39□□□□□ -0.59
SPTAN1-213ENST00000627809 CRB1P82279 1406 aa11.38□□□□□ -0.59
SPTAN1-213ENST00000627809 NSD3Q9BZ95 1437 aa11.38□□□□□ -0.59
SPTAN1-213ENST00000627809 GGNBP2Q9H3C7 697 aa11.38□□□□□ -0.59
SPTAN1-213ENST00000627809 BRD4O60885 1362 aaPredicted RBP11.38□□□□□ -0.59
SPTAN1-213ENST00000627809 KAT6BQ8WYB5 2073 aa11.37□□□□□ -0.59
SPTAN1-213ENST00000627809 BLMP54132 1417 aaPredicted RBP11.36□□□□□ -0.59
SPTAN1-213ENST00000627809 DOT1LQ8TEK3 1739 aa11.36□□□□□ -0.59
SPTAN1-213ENST00000627809 TOGARAM1Q9Y4F4 1720 aa11.36□□□□□ -0.59
SPTAN1-213ENST00000627809 FYB1O15117 783 aa11.36□□□□□ -0.59
SPTAN1-213ENST00000627809 RRS1Q15050 365 aaKnown RBP11.36□□□□□ -0.59
SPTAN1-213ENST00000627809 ZNF692Q9BU19 519 aaPredicted RBP11.36□□□□□ -0.59
SPTAN1-213ENST00000627809 MAP3K19Q56UN5 1328 aa11.35□□□□□ -0.59
SPTAN1-213ENST00000627809 ABCC6O95255 1503 aa11.35□□□□□ -0.59
SPTAN1-213ENST00000627809 BTAF1O14981 1849 aa11.35□□□□□ -0.59
SPTAN1-213ENST00000627809 WDR17Q8IZU2 1322 aa11.35□□□□□ -0.59
SPTAN1-213ENST00000627809 HDGFL2Q7Z4V5 671 aaPredicted RBP11.34□□□□□ -0.59
SPTAN1-213ENST00000627809 POLR3GLQ9BT43 218 aa11.34□□□□□ -0.59
SPTAN1-213ENST00000627809 MEGF6O75095 1541 aa11.34□□□□□ -0.59
SPTAN1-213ENST00000627809 ERBB3P21860 1342 aa11.34□□□□□ -0.59
SPTAN1-213ENST00000627809 NHSQ6T4R5 1651 aa11.33□□□□□ -0.6
SPTAN1-213ENST00000627809 TUBGCP6Q96RT7 1819 aa11.33□□□□□ -0.6
SPTAN1-213ENST00000627809 TRIM37O94972 964 aa11.33□□□□□ -0.6
SPTAN1-213ENST00000627809 EVA1CP58658 441 aa11.33□□□□□ -0.6
SPTAN1-213ENST00000627809 TMF1P82094 1093 aa11.33□□□□□ -0.6
SPTAN1-213ENST00000627809 EN1Q05925 392 aaPredicted RBP11.33□□□□□ -0.6
SPTAN1-213ENST00000627809 TCP11L2Q8N4U5 519 aa11.33□□□□□ -0.6
SPTAN1-213ENST00000627809 MARCH10Q8NA82 808 aaPredicted RBP11.33□□□□□ -0.6
SPTAN1-213ENST00000627809 LTV1Q96GA3 475 aaPredicted RBP11.33□□□□□ -0.6
SPTAN1-213ENST00000627809 ZEB1P37275 1124 aaPredicted RBP11.32□□□□□ -0.6
SPTAN1-213ENST00000627809 BARGINQ6ZT62 677 aa11.32□□□□□ -0.6
SPTAN1-213ENST00000627809 TOM1L2Q6ZVM7 507 aa11.32□□□□□ -0.6
SPTAN1-213ENST00000627809 USHBP1Q8N6Y0 703 aa11.32□□□□□ -0.6
SPTAN1-213ENST00000627809 PUS7Q96PZ0 661 aaKnown RBP11.32□□□□□ -0.6
SPTAN1-213ENST00000627809 TERF2IPQ9NYB0 399 aa11.32□□□□□ -0.6
SPTAN1-213ENST00000627809 EMILIN1Q9Y6C2 1016 aa11.32□□□□□ -0.6
SPTAN1-213ENST00000627809 ANKRD24Q8TF21 1146 aa11.31□□□□□ -0.6
SPTAN1-213ENST00000627809 NINLQ9Y2I6 1382 aa11.3□□□□□ -0.6
SPTAN1-213ENST00000627809 TNS2Q63HR2 1409 aa11.3□□□□□ -0.6
SPTAN1-213ENST00000627809 PSDA5PKW4 1024 aaPredicted RBP11.3□□□□□ -0.6
SPTAN1-213ENST00000627809 HOXC9P31274 260 aa11.3□□□□□ -0.6
SPTAN1-213ENST00000627809 EZH2Q15910 746 aaKnown RBP11.3□□□□□ -0.6
SPTAN1-213ENST00000627809 KIF7Q2M1P5 1343 aa11.3□□□□□ -0.6
SPTAN1-213ENST00000627809 ITGB4P16144 1822 aa11.3□□□□□ -0.6
SPTAN1-213ENST00000627809 PKD1L3Q7Z443 1732 aa11.29□□□□□ -0.6
SPTAN1-213ENST00000627809 RGPD3A6NKT7 1758 aaPredicted RBP11.29□□□□□ -0.6
SPTAN1-213ENST00000627809 RGPD4Q7Z3J3 1758 aa11.29□□□□□ -0.6
SPTAN1-213ENST00000627809 VIRMAQ69YN4 1812 aaKnown RBP11.29□□□□□ -0.6
SPTAN1-213ENST00000627809 KCNQ2O43526 872 aa11.28□□□□□ -0.6
SPTAN1-213ENST00000627809 HSP90AB2PQ58FF8 381 aa11.28□□□□□ -0.6
SPTAN1-213ENST00000627809 KCNH5Q8NCM2 988 aa11.28□□□□□ -0.6
SPTAN1-213ENST00000627809 CARD10Q9BWT7 1032 aa11.28□□□□□ -0.6
SPTAN1-213ENST00000627809 CASZ1Q86V15 1759 aa11.28□□□□□ -0.6
SPTAN1-213ENST00000627809 PAPPAQ13219 1627 aa11.27□□□□□ -0.6
SPTAN1-213ENST00000627809 CSB-PGBD3P0DP91 1061 aa11.27□□□□□ -0.61
SPTAN1-213ENST00000627809 EIF4G2P78344 907 aaKnown RBP eCLIP11.27□□□□□ -0.61
SPTAN1-213ENST00000627809 IP6K1Q92551 441 aa11.27□□□□□ -0.61
SPTAN1-213ENST00000627809 CAMKK2Q96RR4 588 aa11.27□□□□□ -0.61
SPTAN1-213ENST00000627809 NLRP2Q9NX02 1062 aa11.27□□□□□ -0.61
SPTAN1-213ENST00000627809 OVOS2A0A0G2JMS6 1433 aa11.26□□□□□ -0.61
SPTAN1-213ENST00000627809 TNNT2P45379 298 aaPredicted RBP11.26□□□□□ -0.61
SPTAN1-213ENST00000627809 NBPF6Q5VWK0 638 aa11.26□□□□□ -0.61
SPTAN1-213ENST00000627809 COG3Q96JB2 828 aa11.26□□□□□ -0.61
SPTAN1-213ENST00000627809 NBPF4Q96M43 638 aa11.26□□□□□ -0.61
SPTAN1-213ENST00000627809 PDGFDQ9GZP0 370 aaPredicted RBP11.26□□□□□ -0.61
SPTAN1-213ENST00000627809 PANK3Q9H999 370 aa11.26□□□□□ -0.61
SPTAN1-213ENST00000627809 PROM2Q8N271 834 aa11.25□□□□□ -0.61
SPTAN1-213ENST00000627809 ACSBG1Q96GR2 724 aa11.25□□□□□ -0.61
SPTAN1-213ENST00000627809 ANO8Q9HCE9 1232 aaPredicted RBP11.25□□□□□ -0.61
SPTAN1-213ENST00000627809 LY75O60449 1722 aa11.25□□□□□ -0.61
SPTAN1-213ENST00000627809 DDB1Q16531 1140 aa11.24□□□□□ -0.61
SPTAN1-213ENST00000627809 THRAP3Q9Y2W1 955 aaKnown RBP11.24□□□□□ -0.61
SPTAN1-213ENST00000627809 WASHC2AQ641Q2 1341 aa11.24□□□□□ -0.61
SPTAN1-213ENST00000627809 NSD2O96028 1365 aa11.24□□□□□ -0.61
SPTAN1-213ENST00000627809 CCDC7Q96M83 1385 aa11.24□□□□□ -0.61
SPTAN1-213ENST00000627809 NCAPD2Q15021 1401 aa11.24□□□□□ -0.61
SPTAN1-213ENST00000627809 LRP5O75197 1615 aa11.24□□□□□ -0.61
SPTAN1-213ENST00000627809 PDE3BQ13370 1112 aa11.23□□□□□ -0.61
SPTAN1-213ENST00000627809 TAF1LQ8IZX4 1826 aa11.23□□□□□ -0.61
SPTAN1-213ENST00000627809 RTL1A6NKG5 1358 aa11.22□□□□□ -0.61
SPTAN1-213ENST00000627809 SLC24A1O60721 1099 aa11.22□□□□□ -0.61
SPTAN1-213ENST00000627809 APBA3O96018 575 aa11.22□□□□□ -0.61
SPTAN1-213ENST00000627809 AMPHP49418 695 aa11.22□□□□□ -0.61
SPTAN1-213ENST00000627809 KCNQ4P56696 695 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms