RNA–Protein interactions for RNA: ENST00000627320.2

TCF4-258, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 699 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-258ENST00000627320 HOXD11P31277 338 aaPredicted RBP12.82□□□□□ -0.36
TCF4-258ENST00000627320 KAT6BQ8WYB5 2073 aa12.81□□□□□ -0.36
TCF4-258ENST00000627320 NHSQ6T4R5 1651 aa12.81□□□□□ -0.36
TCF4-258ENST00000627320 WASLO00401 505 aaPredicted RBP12.81□□□□□ -0.36
TCF4-258ENST00000627320 COL24A1Q17RW2 1714 aa12.81□□□□□ -0.36
TCF4-258ENST00000627320 MARCH10Q8NA82 808 aaPredicted RBP12.8□□□□□ -0.36
TCF4-258ENST00000627320 PIK3C2AO00443 1686 aa12.8□□□□□ -0.36
TCF4-258ENST00000627320 GIGYF1O75420 1035 aaPredicted RBP12.79□□□□□ -0.36
TCF4-258ENST00000627320 KLHL34Q8N239 644 aa12.78□□□□□ -0.36
TCF4-258ENST00000627320 CRB1P82279 1406 aa12.78□□□□□ -0.36
TCF4-258ENST00000627320 PLSCR1O15162 318 aa12.77□□□□□ -0.37
TCF4-258ENST00000627320 SLC15A2Q16348 729 aa12.77□□□□□ -0.37
TCF4-258ENST00000627320 TXNRD1Q16881 649 aa12.77□□□□□ -0.37
TCF4-258ENST00000627320 PELP1Q8IZL8 1130 aaKnown RBP12.77□□□□□ -0.37
TCF4-258ENST00000627320 NUDT16Q96DE0 195 aaKnown RBP12.77□□□□□ -0.37
TCF4-258ENST00000627320 MPHOSPH9Q99550 1183 aa12.77□□□□□ -0.37
TCF4-258ENST00000627320 USP19O94966 1318 aa12.77□□□□□ -0.37
TCF4-258ENST00000627320 QSER1Q2KHR3 1735 aa12.76□□□□□ -0.37
TCF4-258ENST00000627320 ACEP12821 1306 aa12.76□□□□□ -0.37
TCF4-258ENST00000627320 CPDO75976 1380 aa12.75□□□□□ -0.37
TCF4-258ENST00000627320 ZNF827Q17R98 1081 aa12.75□□□□□ -0.37
TCF4-258ENST00000627320 NLGN2Q8NFZ4 835 aa12.75□□□□□ -0.37
TCF4-258ENST00000627320 STK32BQ9NY57 414 aa12.75□□□□□ -0.37
TCF4-258ENST00000627320 SLIT3O75094 1523 aa12.74□□□□□ -0.37
TCF4-258ENST00000627320 POLR3AO14802 1390 aaPredicted RBP12.74□□□□□ -0.37
TCF4-258ENST00000627320 ARXQ96QS3 562 aa12.74□□□□□ -0.37
TCF4-258ENST00000627320 ZBTB22O15209 634 aa12.73□□□□□ -0.37
TCF4-258ENST00000627320 DDB1Q16531 1140 aa12.73□□□□□ -0.37
TCF4-258ENST00000627320 GPR162Q16538 588 aa12.73□□□□□ -0.37
TCF4-258ENST00000627320 ABTB2Q8N961 1025 aa12.73□□□□□ -0.37
TCF4-258ENST00000627320 ACSBG1Q96GR2 724 aa12.73□□□□□ -0.37
TCF4-258ENST00000627320 MTFR1LQ9H019 292 aa12.73□□□□□ -0.37
TCF4-258ENST00000627320 AXIN2Q9Y2T1 843 aa12.73□□□□□ -0.37
TCF4-258ENST00000627320 EIF3AQ14152 1382 aaKnown RBP12.72□□□□□ -0.37
TCF4-258ENST00000627320 KDM2AQ9Y2K7 1162 aa12.72□□□□□ -0.37
TCF4-258ENST00000627320 GCP02774 474 aa12.71□□□□□ -0.37
TCF4-258ENST00000627320 YBX3P16989 372 aaKnown RBP eCLIP12.71□□□□□ -0.37
TCF4-258ENST00000627320 CDK19Q9BWU1 502 aa12.71□□□□□ -0.37
TCF4-258ENST00000627320 THRAP3Q9Y2W1 955 aaKnown RBP12.71□□□□□ -0.37
TCF4-258ENST00000627320 ATP10DQ9P241 1426 aa12.71□□□□□ -0.38
TCF4-258ENST00000627320 KCNQ4P56696 695 aa12.7□□□□□ -0.38
TCF4-258ENST00000627320 TOM1L2Q6ZVM7 507 aa12.7□□□□□ -0.38
TCF4-258ENST00000627320 QRICH2Q9H0J4 1663 aa12.7□□□□□ -0.38
TCF4-258ENST00000627320 DOT1LQ8TEK3 1739 aa12.69□□□□□ -0.38
TCF4-258ENST00000627320 LRRC4BQ9NT99 713 aa12.69□□□□□ -0.38
TCF4-258ENST00000627320 TRPM1Q7Z4N2 1603 aa12.69□□□□□ -0.38
TCF4-258ENST00000627320 LTN1O94822 1766 aa12.69□□□□□ -0.38
TCF4-258ENST00000627320 MAP3K5Q99683 1374 aa12.69□□□□□ -0.38
TCF4-258ENST00000627320 SOX12O15370 315 aa12.68□□□□□ -0.38
TCF4-258ENST00000627320 ZNF526Q8TF50 670 aaPredicted RBP12.68□□□□□ -0.38
TCF4-258ENST00000627320 PPIP5K1Q6PFW1 1433 aa12.67□□□□□ -0.38
TCF4-258ENST00000627320 RGPD2P0DJD1 1756 aa12.66□□□□□ -0.38
TCF4-258ENST00000627320 LY75O60449 1722 aa12.66□□□□□ -0.38
TCF4-258ENST00000627320 CPSF1Q10570 1443 aaKnown RBP12.66□□□□□ -0.38
TCF4-258ENST00000627320 TNS2Q63HR2 1409 aa12.66□□□□□ -0.38
TCF4-258ENST00000627320 WWC3Q9ULE0 1092 aa12.66□□□□□ -0.38
TCF4-258ENST00000627320 WDR17Q8IZU2 1322 aa12.65□□□□□ -0.38
TCF4-258ENST00000627320 BCL9O00512 1426 aa12.65□□□□□ -0.38
TCF4-258ENST00000627320 ABCC6O95255 1503 aa12.65□□□□□ -0.38
TCF4-258ENST00000627320 AATKQ6ZMQ8 1374 aa12.65□□□□□ -0.38
TCF4-258ENST00000627320 PNPLA7Q6ZV29 1317 aa12.64□□□□□ -0.39
TCF4-258ENST00000627320 NFAT5O94916 1531 aa12.64□□□□□ -0.39
TCF4-258ENST00000627320 DCAF11Q8TEB1 546 aa12.64□□□□□ -0.39
TCF4-258ENST00000627320 PLEKHG3A1L390 1219 aa12.63□□□□□ -0.39
TCF4-258ENST00000627320 CABP2Q9NPB3 220 aa12.63□□□□□ -0.39
TCF4-258ENST00000627320 USP6P35125 1406 aa12.62□□□□□ -0.39
TCF4-258ENST00000627320 NLRP6P59044 892 aa12.62□□□□□ -0.39
TCF4-258ENST00000627320 NLRP13Q86W25 1043 aa12.62□□□□□ -0.39
TCF4-258ENST00000627320 CAPN15O75808 1086 aa12.61□□□□□ -0.39
TCF4-258ENST00000627320 AKT1S1Q96B36 256 aa12.61□□□□□ -0.39
TCF4-258ENST00000627320 CCDC61Q9Y6R9 512 aa12.61□□□□□ -0.39
TCF4-258ENST00000627320 TAF1LQ8IZX4 1826 aa12.6□□□□□ -0.39
TCF4-258ENST00000627320 WDR90Q96KV7 1748 aa12.6□□□□□ -0.39
TCF4-258ENST00000627320 TOGARAM1Q9Y4F4 1720 aa12.6□□□□□ -0.39
TCF4-258ENST00000627320 ADCY9O60503 1353 aa12.6□□□□□ -0.39
TCF4-258ENST00000627320 HSPA6P17066 643 aa12.6□□□□□ -0.39
TCF4-258ENST00000627320 MSL1Q68DK7 614 aa12.6□□□□□ -0.39
TCF4-258ENST00000627320 KIAA1210Q9ULL0 1709 aa12.59□□□□□ -0.39
TCF4-258ENST00000627320 BRD4O60885 1362 aaPredicted RBP12.59□□□□□ -0.39
TCF4-258ENST00000627320 C5P01031 1676 aa12.59□□□□□ -0.39
TCF4-258ENST00000627320 CSB-PGBD3P0DP91 1061 aa12.59□□□□□ -0.39
TCF4-258ENST00000627320 MON2Q7Z3U7 1717 aa12.59□□□□□ -0.39
TCF4-258ENST00000627320 C11orf95C9JLR9 678 aaPredicted RBP12.58□□□□□ -0.4
TCF4-258ENST00000627320 NBPF1Q3BBV0 1214 aa12.58□□□□□ -0.4
TCF4-258ENST00000627320 USP54Q70EL1 1684 aa12.57□□□□□ -0.4
TCF4-258ENST00000627320 EXOC5O00471 708 aa12.57□□□□□ -0.4
TCF4-258ENST00000627320 SRPK2P78362 688 aaKnown RBP12.57□□□□□ -0.4
TCF4-258ENST00000627320 CARD10Q9BWT7 1032 aa12.57□□□□□ -0.4
TCF4-258ENST00000627320 HTRA3P83110 453 aa12.56□□□□□ -0.4
TCF4-258ENST00000627320 ARHGEF25Q86VW2 580 aa12.56□□□□□ -0.4
TCF4-258ENST00000627320 GPBP1L1Q9HC44 474 aaPredicted RBP12.56□□□□□ -0.4
TCF4-258ENST00000627320 CABP1Q9NZU7 370 aa12.56□□□□□ -0.4
TCF4-258ENST00000627320 N4BP2Q86UW6 1770 aaPredicted RBP12.56□□□□□ -0.4
TCF4-258ENST00000627320 KIAA1551Q9HCM1 1747 aa12.55□□□□□ -0.4
TCF4-258ENST00000627320 SMIM5Q71RC9 77 aa12.55□□□□□ -0.4
TCF4-258ENST00000627320 NSD2O96028 1365 aa12.55□□□□□ -0.4
TCF4-258ENST00000627320 FAM208AQ9UK61 1670 aaKnown RBP12.54□□□□□ -0.4
TCF4-258ENST00000627320 POLD1P28340 1107 aa12.54□□□□□ -0.4
TCF4-258ENST00000627320 COL13A1Q5TAT6 717 aaPredicted RBP12.54□□□□□ -0.4
TCF4-258ENST00000627320 KIF3CO14782 793 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms