RNA–Protein interactions for RNA: ENST00000626631.1

TCF4-256, Transcript of transcription factor 4, human

TSL 2

Gene TCF4, Length 622 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF4-256	ENST00000626631	SSH2	Q76I76	1423 aa		11.46	□□□□□ -0.57
TCF4-256	ENST00000626631	CPD	O75976	1380 aa		11.46	□□□□□ -0.57
TCF4-256	ENST00000626631	EVA1C	P58658	441 aa		11.46	□□□□□ -0.57
TCF4-256	ENST00000626631	LARP1	Q6PKG0	1096 aa	Known RBP	11.46	□□□□□ -0.57
TCF4-256	ENST00000626631	ABTB2	Q8N961	1025 aa		11.46	□□□□□ -0.57
TCF4-256	ENST00000626631	ZNF692	Q9BU19	519 aa	Predicted RBP	11.46	□□□□□ -0.57
TCF4-256	ENST00000626631	TOPAZ1	Q8N9V7	1692 aa		11.46	□□□□□ -0.58
TCF4-256	ENST00000626631	APBA3	O96018	575 aa		11.45	□□□□□ -0.58
TCF4-256	ENST00000626631	GC	P02774	474 aa		11.45	□□□□□ -0.58
TCF4-256	ENST00000626631	CD44	P16070	742 aa	Known RBP	11.45	□□□□□ -0.58
TCF4-256	ENST00000626631	TCP11L2	Q8N4U5	519 aa		11.45	□□□□□ -0.58
TCF4-256	ENST00000626631	USP35	Q9P2H5	1018 aa		11.45	□□□□□ -0.58
TCF4-256	ENST00000626631	PARD3	Q8TEW0	1356 aa		11.44	□□□□□ -0.58
TCF4-256	ENST00000626631	KIAA1210	Q9ULL0	1709 aa		11.44	□□□□□ -0.58
TCF4-256	ENST00000626631	PDE3B	Q13370	1112 aa		11.44	□□□□□ -0.58
TCF4-256	ENST00000626631	SSUH2	Q9Y2M2	353 aa		11.44	□□□□□ -0.58
TCF4-256	ENST00000626631	THRAP3	Q9Y2W1	955 aa	Known RBP	11.44	□□□□□ -0.58
TCF4-256	ENST00000626631	LMO7	Q8WWI1	1683 aa		11.43	□□□□□ -0.58
TCF4-256	ENST00000626631	NRK	Q7Z2Y5	1582 aa		11.43	□□□□□ -0.58
TCF4-256	ENST00000626631	PRR29	P0C7W0	189 aa		11.43	□□□□□ -0.58
TCF4-256	ENST00000626631	NLRP13	Q86W25	1043 aa		11.43	□□□□□ -0.58
TCF4-256	ENST00000626631	BRD4	O60885	1362 aa	Predicted RBP	11.42	□□□□□ -0.58
TCF4-256	ENST00000626631	DCBLD2	Q96PD2	775 aa		11.42	□□□□□ -0.58
TCF4-256	ENST00000626631	CABP2	Q9NPB3	220 aa		11.42	□□□□□ -0.58
TCF4-256	ENST00000626631	PPIP5K1	Q6PFW1	1433 aa		11.42	□□□□□ -0.58
TCF4-256	ENST00000626631	CENPJ	Q9HC77	1338 aa	Predicted RBP	11.41	□□□□□ -0.58
TCF4-256	ENST00000626631	SRPK2	P78362	688 aa	Known RBP	11.41	□□□□□ -0.58
TCF4-256	ENST00000626631	CABP1	Q9NZU7	370 aa		11.41	□□□□□ -0.58
TCF4-256	ENST00000626631	COL5A2	P05997	1499 aa	Predicted RBP	11.4	□□□□□ -0.58
TCF4-256	ENST00000626631	C11orf95	C9JLR9	678 aa	Predicted RBP	11.39	□□□□□ -0.59
TCF4-256	ENST00000626631	CLCN6	P51797	869 aa		11.39	□□□□□ -0.59
TCF4-256	ENST00000626631	NLRP6	P59044	892 aa		11.39	□□□□□ -0.59
TCF4-256	ENST00000626631	AATK	Q6ZMQ8	1374 aa		11.39	□□□□□ -0.59
TCF4-256	ENST00000626631	USP6	P35125	1406 aa		11.38	□□□□□ -0.59
TCF4-256	ENST00000626631	CRB1	P82279	1406 aa		11.38	□□□□□ -0.59
TCF4-256	ENST00000626631	NBPF14	Q5TI25	921 aa		11.38	□□□□□ -0.59
TCF4-256	ENST00000626631	AXIN2	Q9Y2T1	843 aa		11.38	□□□□□ -0.59
TCF4-256	ENST00000626631	RREB1	Q92766	1687 aa		11.38	□□□□□ -0.59
TCF4-256	ENST00000626631	PLSCR1	O15162	318 aa		11.37	□□□□□ -0.59
TCF4-256	ENST00000626631	UTRN	P46939	3433 aa		11.37	□□□□□ -0.59
TCF4-256	ENST00000626631	PARP4	Q9UKK3	1724 aa	Known RBP	11.37	□□□□□ -0.59
TCF4-256	ENST00000626631	SLIT3	O75094	1523 aa		11.36	□□□□□ -0.59
TCF4-256	ENST00000626631	NUP188	Q5SRE5	1749 aa		11.36	□□□□□ -0.59
TCF4-256	ENST00000626631	L3MBTL2	Q969R5	705 aa		11.36	□□□□□ -0.59
TCF4-256	ENST00000626631	PEAK1	Q9H792	1746 aa		11.35	□□□□□ -0.59
TCF4-256	ENST00000626631	PTF1A	Q7RTS3	328 aa		11.35	□□□□□ -0.59
TCF4-256	ENST00000626631	ARHGEF25	Q86VW2	580 aa		11.35	□□□□□ -0.59
TCF4-256	ENST00000626631	PROM2	Q8N271	834 aa		11.35	□□□□□ -0.59
TCF4-256	ENST00000626631	COL18A1	P39060	1754 aa		11.35	□□□□□ -0.59
TCF4-256	ENST00000626631	OVOS2	A0A0G2JMS6	1433 aa		11.35	□□□□□ -0.59
TCF4-256	ENST00000626631	OVOS2	A0A0J9YW53	1432 aa		11.35	□□□□□ -0.59
TCF4-256	ENST00000626631	OVOS2	Q6IE36	1432 aa		11.35	□□□□□ -0.59
TCF4-256	ENST00000626631	WDR17	Q8IZU2	1322 aa		11.35	□□□□□ -0.59
TCF4-256	ENST00000626631	KCNQ2	O43526	872 aa		11.34	□□□□□ -0.59
TCF4-256	ENST00000626631	DDB1	Q16531	1140 aa		11.34	□□□□□ -0.59
TCF4-256	ENST00000626631	MARCH10	Q8NA82	808 aa	Predicted RBP	11.34	□□□□□ -0.59
TCF4-256	ENST00000626631	BCL11B	Q9C0K0	894 aa	Predicted RBP	11.34	□□□□□ -0.59
TCF4-256	ENST00000626631	SPON1	Q9HCB6	807 aa		11.34	□□□□□ -0.59
TCF4-256	ENST00000626631	BCL9	O00512	1426 aa		11.34	□□□□□ -0.59
TCF4-256	ENST00000626631	TTC21B	Q7Z4L5	1316 aa		11.34	□□□□□ -0.59
TCF4-256	ENST00000626631	EVC2	Q86UK5	1308 aa		11.34	□□□□□ -0.59
TCF4-256	ENST00000626631	ZBTB7C	A1YPR0	619 aa		11.33	□□□□□ -0.6
TCF4-256	ENST00000626631	POTEM	A6NI47	508 aa		11.33	□□□□□ -0.6
TCF4-256	ENST00000626631	TOM1L2	Q6ZVM7	507 aa		11.33	□□□□□ -0.6
TCF4-256	ENST00000626631	CARD10	Q9BWT7	1032 aa		11.33	□□□□□ -0.6
TCF4-256	ENST00000626631	QRICH2	Q9H0J4	1663 aa		11.33	□□□□□ -0.6
TCF4-256	ENST00000626631	KCNH5	Q8NCM2	988 aa		11.32	□□□□□ -0.6
TCF4-256	ENST00000626631	CDCA7	Q9BWT1	371 aa	Predicted RBP	11.32	□□□□□ -0.6
TCF4-256	ENST00000626631	PIK3C2A	O00443	1686 aa		11.32	□□□□□ -0.6
TCF4-256	ENST00000626631	SBF2	Q86WG5	1849 aa		11.32	□□□□□ -0.6
TCF4-256	ENST00000626631	SIN3A	Q96ST3	1273 aa		11.31	□□□□□ -0.6
TCF4-256	ENST00000626631	ANO8	Q9HCE9	1232 aa	Predicted RBP	11.31	□□□□□ -0.6
TCF4-256	ENST00000626631	CPSF1	Q10570	1443 aa	Known RBP	11.31	□□□□□ -0.6
TCF4-256	ENST00000626631	LRRC37A3	O60309	1634 aa		11.31	□□□□□ -0.6
TCF4-256	ENST00000626631	PDGFD	Q9GZP0	370 aa	Predicted RBP	11.3	□□□□□ -0.6
TCF4-256	ENST00000626631	FARP1	Q9Y4F1	1045 aa	Predicted RBP	11.3	□□□□□ -0.6
TCF4-256	ENST00000626631	RGPD3	A6NKT7	1758 aa	Predicted RBP	11.3	□□□□□ -0.6
TCF4-256	ENST00000626631	RGPD4	Q7Z3J3	1758 aa		11.3	□□□□□ -0.6
TCF4-256	ENST00000626631	TTC21A	Q8NDW8	1320 aa		11.3	□□□□□ -0.6
TCF4-256	ENST00000626631	PPP1R1B	Q9UD71	204 aa	Predicted RBP	11.29	□□□□□ -0.6
TCF4-256	ENST00000626631	NINL	Q9Y2I6	1382 aa		11.28	□□□□□ -0.6
TCF4-256	ENST00000626631	TRPM1	Q7Z4N2	1603 aa		11.28	□□□□□ -0.6
TCF4-256	ENST00000626631	EXOC5	O00471	708 aa		11.28	□□□□□ -0.6
TCF4-256	ENST00000626631	YY1	P25490	414 aa		11.28	□□□□□ -0.6
TCF4-256	ENST00000626631	NFAT5	O94916	1531 aa		11.28	□□□□□ -0.6
TCF4-256	ENST00000626631	PTGER2	P43116	358 aa		11.27	□□□□□ -0.61
TCF4-256	ENST00000626631	TXNRD1	Q16881	649 aa		11.27	□□□□□ -0.61
TCF4-256	ENST00000626631	POTEG	Q6S5H5	508 aa		11.27	□□□□□ -0.61
TCF4-256	ENST00000626631	ROCK2	O75116	1388 aa	Known RBP	11.27	□□□□□ -0.61
TCF4-256	ENST00000626631	USP31	Q70CQ4	1352 aa		11.27	□□□□□ -0.61
TCF4-256	ENST00000626631	KTN1	Q86UP2	1357 aa	Known RBP	11.27	□□□□□ -0.61
TCF4-256	ENST00000626631	AKAP12	Q02952	1782 aa		11.26	□□□□□ -0.61
TCF4-256	ENST00000626631	CASZ1	Q86V15	1759 aa		11.26	□□□□□ -0.61
TCF4-256	ENST00000626631	RGPD5	Q99666	1765 aa		11.26	□□□□□ -0.61
TCF4-256	ENST00000626631	SOX12	O15370	315 aa		11.26	□□□□□ -0.61
TCF4-256	ENST00000626631	CSB-PGBD3	P0DP91	1061 aa		11.26	□□□□□ -0.61
TCF4-256	ENST00000626631	OTUD5	Q96G74	571 aa		11.26	□□□□□ -0.61
TCF4-256	ENST00000626631	CCDC7	Q96M83	1385 aa		11.26	□□□□□ -0.61
TCF4-256	ENST00000626631	WNK3	Q9BYP7	1800 aa		11.25	□□□□□ -0.61
TCF4-256	ENST00000626631	ZBTB7A	O95365	584 aa		11.25	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms