RNA–Protein interactions for RNA: ENST00000625927.2

ACAA1-219, Transcript of acetyl-CoA acyltransferase 1, humanhuman

TSL 5 BASIC

Gene ACAA1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACAA1-219ENST00000625927 GTF3C3Q9Y5Q9 886 aa29.85■■■□□ 2.37
ACAA1-219ENST00000625927 SPATA31A3Q5VYP0 1347 aa29.84■■■□□ 2.37
ACAA1-219ENST00000625927 PRKAR2BP31323 418 aa29.84■■■□□ 2.37
ACAA1-219ENST00000625927 LTN1O94822 1766 aa29.83■■■□□ 2.37
ACAA1-219ENST00000625927 KIF24Q5T7B8 1368 aa29.83■■■□□ 2.37
ACAA1-219ENST00000625927 ZNF521Q96K83 1311 aa29.81■■■□□ 2.36
ACAA1-219ENST00000625927 NGEFQ8N5V2 710 aa29.81■■■□□ 2.36
ACAA1-219ENST00000625927 SOS2Q07890 1332 aaPredicted RBP29.8■■■□□ 2.36
ACAA1-219ENST00000625927 MED1Q15648 1581 aaPredicted RBP29.8■■■□□ 2.36
ACAA1-219ENST00000625927 NEFMP07197 916 aa29.8■■■□□ 2.36
ACAA1-219ENST00000625927 LTV1Q96GA3 475 aaPredicted RBP29.8■■■□□ 2.36
ACAA1-219ENST00000625927 RTL1A6NKG5 1358 aa29.79■■■□□ 2.36
ACAA1-219ENST00000625927 SULT6B1Q6IMI4 303 aa29.79■■■□□ 2.36
ACAA1-219ENST00000625927 CABLES1Q8TDN4 633 aa29.79■■■□□ 2.36
ACAA1-219ENST00000625927 ARHGEF10O15013 1369 aa29.79■■■□□ 2.36
ACAA1-219ENST00000625927 IP6K1Q92551 441 aa29.78■■■□□ 2.36
ACAA1-219ENST00000625927 GOLGA2Q08379 1002 aa29.77■■■□□ 2.36
ACAA1-219ENST00000625927 AEBP1Q8IUX7 1158 aa29.77■■■□□ 2.36
ACAA1-219ENST00000625927 ARHGEF25Q86VW2 580 aa29.77■■■□□ 2.36
ACAA1-219ENST00000625927 WWC1Q8IX03 1113 aa29.77■■■□□ 2.36
ACAA1-219ENST00000625927 TMPOP42166 694 aaKnown RBP29.76■■■□□ 2.35
ACAA1-219ENST00000625927 ZC3H6P61129 1189 aaKnown RBP29.76■■■□□ 2.35
ACAA1-219ENST00000625927 PHACTR3Q96KR7 559 aa29.75■■■□□ 2.35
ACAA1-219ENST00000625927 SUPT16HQ9Y5B9 1047 aaKnown RBP29.75■■■□□ 2.35
ACAA1-219ENST00000625927 NHSL1Q5SYE7 1610 aa29.74■■■□□ 2.35
ACAA1-219ENST00000625927 RGPD1P0DJD0 1748 aa29.73■■■□□ 2.35
ACAA1-219ENST00000625927 EYA1Q99502 592 aa29.73■■■□□ 2.35
ACAA1-219ENST00000625927 PHRF1Q9P1Y6 1649 aaKnown RBP29.72■■■□□ 2.35
ACAA1-219ENST00000625927 ROBO1Q9Y6N7 1651 aa29.72■■■□□ 2.35
ACAA1-219ENST00000625927 RIPK4P57078 832 aa29.71■■■□□ 2.35
ACAA1-219ENST00000625927 CCDC27Q2M243 656 aa29.7■■■□□ 2.35
ACAA1-219ENST00000625927 PHF23Q9BUL5 403 aaPredicted RBP29.69■■■□□ 2.34
ACAA1-219ENST00000625927 SPINK5Q9NQ38 1064 aaPredicted RBP29.69■■■□□ 2.34
ACAA1-219ENST00000625927 IGSF1Q8N6C5 1336 aa29.69■■■□□ 2.34
ACAA1-219ENST00000625927 SLFN5Q08AF3 891 aa29.68■■■□□ 2.34
ACAA1-219ENST00000625927 NCBP3Q53F19 620 aaKnown RBP29.67■■■□□ 2.34
ACAA1-219ENST00000625927 NFE2L2Q16236 605 aa29.67■■■□□ 2.34
ACAA1-219ENST00000625927 TRIM35Q9UPQ4 493 aa29.66■■■□□ 2.34
ACAA1-219ENST00000625927 CRYBG1Q9Y4K1 1723 aa29.66■■■□□ 2.34
ACAA1-219ENST00000625927 DUSP27Q5VZP5 1158 aa29.65■■■□□ 2.34
ACAA1-219ENST00000625927 AXIN2Q9Y2T1 843 aa29.65■■■□□ 2.34
ACAA1-219ENST00000625927 E9PSI1 815 aa29.64■■■□□ 2.34
ACAA1-219ENST00000625927 HAP1P54257 671 aaPredicted RBP29.64■■■□□ 2.34
ACAA1-219ENST00000625927 WDR63Q8IWG1 891 aa29.64■■■□□ 2.34
ACAA1-219ENST00000625927 USHBP1Q8N6Y0 703 aa29.64■■■□□ 2.34
ACAA1-219ENST00000625927 TOM1O60784 492 aa29.63■■■□□ 2.33
ACAA1-219ENST00000625927 PIP4K2BP78356 416 aa29.63■■■□□ 2.33
ACAA1-219ENST00000625927 ANKRD24Q8TF21 1146 aa29.62■■■□□ 2.33
ACAA1-219ENST00000625927 CHRNA2Q15822 529 aa29.62■■■□□ 2.33
ACAA1-219ENST00000625927 LRRC59Q96AG4 307 aaKnown RBP29.62■■■□□ 2.33
ACAA1-219ENST00000625927 KDRP35968 1356 aa29.61■■■□□ 2.33
ACAA1-219ENST00000625927 KIAA0232Q92628 1395 aa29.61■■■□□ 2.33
ACAA1-219ENST00000625927 NBPF6Q5VWK0 638 aa29.6■■■□□ 2.33
ACAA1-219ENST00000625927 TRMT2AQ8IZ69 625 aaKnown RBP29.6■■■□□ 2.33
ACAA1-219ENST00000625927 NBPF4Q96M43 638 aa29.6■■■□□ 2.33
ACAA1-219ENST00000625927 NEFLP07196 543 aa29.59■■■□□ 2.33
ACAA1-219ENST00000625927 AHDC1Q5TGY3 1603 aaPredicted RBP29.59■■■□□ 2.33
ACAA1-219ENST00000625927 RGPD5Q99666 1765 aa29.58■■■□□ 2.33
ACAA1-219ENST00000625927 RCAN3Q9UKA8 241 aa29.57■■■□□ 2.32
ACAA1-219ENST00000625927 UBAP1LF5GYI3 381 aa29.56■■■□□ 2.32
ACAA1-219ENST00000625927 RGPD2P0DJD1 1756 aa29.55■■■□□ 2.32
ACAA1-219ENST00000625927 CPDO75976 1380 aa29.55■■■□□ 2.32
ACAA1-219ENST00000625927 FKBP8Q14318 412 aa29.55■■■□□ 2.32
ACAA1-219ENST00000625927 PRDM11Q9NQV5 511 aa29.54■■■□□ 2.32
ACAA1-219ENST00000625927 ERBB3P21860 1342 aa29.54■■■□□ 2.32
ACAA1-219ENST00000625927 COL18A1P39060 1754 aa29.53■■■□□ 2.32
ACAA1-219ENST00000625927 ABCA3Q99758 1704 aa29.53■■■□□ 2.32
ACAA1-219ENST00000625927 MTHFSDQ2M296 383 aaKnown RBP29.53■■■□□ 2.32
ACAA1-219ENST00000625927 THUMPD2Q9BTF0 503 aaKnown RBP29.53■■■□□ 2.32
ACAA1-219ENST00000625927 IRX6P78412 446 aaPredicted RBP29.52■■■□□ 2.32
ACAA1-219ENST00000625927 LMOD3Q0VAK6 560 aa29.52■■■□□ 2.32
ACAA1-219ENST00000625927 DLG5Q8TDM6 1919 aa29.52■■■□□ 2.32
ACAA1-219ENST00000625927 FAM83GA6ND36 823 aa29.51■■■□□ 2.31
ACAA1-219ENST00000625927 MYH16Q9H6N6 1097 aa29.51■■■□□ 2.31
ACAA1-219ENST00000625927 CSB-PGBD3P0DP91 1061 aa29.5■■■□□ 2.31
ACAA1-219ENST00000625927 PHLPP1O60346 1717 aa29.49■■■□□ 2.31
ACAA1-219ENST00000625927 DCTN1Q14203 1278 aa29.49■■■□□ 2.31
ACAA1-219ENST00000625927 IL16Q14005 1332 aa29.48■■■□□ 2.31
ACAA1-219ENST00000625927 GAS2L2Q8NHY3 880 aa29.48■■■□□ 2.31
ACAA1-219ENST00000625927 ABCC6O95255 1503 aa29.48■■■□□ 2.31
ACAA1-219ENST00000625927 TSR2Q969E8 191 aaKnown RBP29.47■■■□□ 2.31
ACAA1-219ENST00000625927 NLRP2Q9NX02 1062 aa29.47■■■□□ 2.31
ACAA1-219ENST00000625927 LAS1LQ9Y4W2 734 aaKnown RBP29.47■■■□□ 2.31
ACAA1-219ENST00000625927 CERKQ8TCT0 537 aa29.45■■■□□ 2.31
ACAA1-219ENST00000625927 FANCIQ9NVI1 1328 aa29.45■■■□□ 2.3
ACAA1-219ENST00000625927 CALD1Q05682 793 aaKnown RBP29.44■■■□□ 2.3
ACAA1-219ENST00000625927 MCM10Q7L590 875 aa29.44■■■□□ 2.3
ACAA1-219ENST00000625927 RNF123Q5XPI4 1314 aa29.43■■■□□ 2.3
ACAA1-219ENST00000625927 COL16A1Q07092 1604 aaPredicted RBP29.43■■■□□ 2.3
ACAA1-219ENST00000625927 NCAPD2Q15021 1401 aa29.42■■■□□ 2.3
ACAA1-219ENST00000625927 CAMTA1Q9Y6Y1 1673 aa29.42■■■□□ 2.3
ACAA1-219ENST00000625927 RTF1Q92541 710 aaKnown RBP29.41■■■□□ 2.3
ACAA1-219ENST00000625927 RRP1P56182 461 aaKnown RBP29.4■■■□□ 2.3
ACAA1-219ENST00000625927 COL22A1Q8NFW1 1626 aaPredicted RBP29.39■■■□□ 2.3
ACAA1-219ENST00000625927 LMO7Q8WWI1 1683 aa29.39■■■□□ 2.3
ACAA1-219ENST00000625927 IFT57Q9NWB7 429 aa29.38■■■□□ 2.29
ACAA1-219ENST00000625927 PLEKHO1Q53GL0 409 aaPredicted RBP29.37■■■□□ 2.29
ACAA1-219ENST00000625927 GNAT3A8MTJ3 354 aa29.36■■■□□ 2.29
ACAA1-219ENST00000625927 GNAI1P63096 354 aa29.36■■■□□ 2.29
ACAA1-219ENST00000625927 EXOSC9Q06265 439 aaKnown RBP29.36■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms