RNA–Protein interactions for RNA: ENST00000625681.2

UBE3A-208, Transcript of ubiquitin protein ligase E3A, human

TSL 5

Gene UBE3A, Length 654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE3A-208	ENST00000625681	PEAK1	Q9H792	1746 aa		32.59	■■■□□ 2.81
UBE3A-208	ENST00000625681	KIAA1210	Q9ULL0	1709 aa		32.57	■■■□□ 2.8
UBE3A-208	ENST00000625681	ARHGEF25	Q86VW2	580 aa		32.56	■■■□□ 2.8
UBE3A-208	ENST00000625681	ATF5	Q9Y2D1	282 aa	Predicted RBP	32.56	■■■□□ 2.8
UBE3A-208	ENST00000625681	SLIT3	O75094	1523 aa		32.56	■■■□□ 2.8
UBE3A-208	ENST00000625681	CSB-PGBD3	P0DP91	1061 aa		32.54	■■■□□ 2.8
UBE3A-208	ENST00000625681	LRRC37A3	O60309	1634 aa		32.53	■■■□□ 2.8
UBE3A-208	ENST00000625681	CDCA7	Q9BWT1	371 aa	Predicted RBP	32.53	■■■□□ 2.8
UBE3A-208	ENST00000625681	UTRN	P46939	3433 aa		32.52	■■■□□ 2.8
UBE3A-208	ENST00000625681	TXNRD1	Q16881	649 aa		32.52	■■■□□ 2.8
UBE3A-208	ENST00000625681	TTC21B	Q7Z4L5	1316 aa		32.51	■■■□□ 2.8
UBE3A-208	ENST00000625681	PTGER2	P43116	358 aa		32.51	■■■□□ 2.79
UBE3A-208	ENST00000625681	CARD10	Q9BWT7	1032 aa		32.5	■■■□□ 2.79
UBE3A-208	ENST00000625681	EVC2	Q86UK5	1308 aa		32.5	■■■□□ 2.79
UBE3A-208	ENST00000625681	EXOC5	O00471	708 aa		32.49	■■■□□ 2.79
UBE3A-208	ENST00000625681	CPSF1	Q10570	1443 aa	Known RBP	32.49	■■■□□ 2.79
UBE3A-208	ENST00000625681	KCNH5	Q8NCM2	988 aa		32.48	■■■□□ 2.79
UBE3A-208	ENST00000625681	STK32B	Q9NY57	414 aa		32.48	■■■□□ 2.79
UBE3A-208	ENST00000625681	L3MBTL2	Q969R5	705 aa		32.47	■■■□□ 2.79
UBE3A-208	ENST00000625681	COL18A1	P39060	1754 aa		32.47	■■■□□ 2.79
UBE3A-208	ENST00000625681	SLC15A2	Q16348	729 aa		32.46	■■■□□ 2.79
UBE3A-208	ENST00000625681	ZNF692	Q9BU19	519 aa	Predicted RBP	32.46	■■■□□ 2.79
UBE3A-208	ENST00000625681	BCL9	O00512	1426 aa		32.45	■■■□□ 2.79
UBE3A-208	ENST00000625681	PIK3C2A	O00443	1686 aa		32.45	■■■□□ 2.79
UBE3A-208	ENST00000625681	SBF2	Q86WG5	1849 aa		32.44	■■■□□ 2.78
UBE3A-208	ENST00000625681	QRICH2	Q9H0J4	1663 aa		32.43	■■■□□ 2.78
UBE3A-208	ENST00000625681	CASZ1	Q86V15	1759 aa		32.42	■■■□□ 2.78
UBE3A-208	ENST00000625681	FHDC1	Q9C0D6	1143 aa	Predicted RBP	32.42	■■■□□ 2.78
UBE3A-208	ENST00000625681	RGPD3	A6NKT7	1758 aa	Predicted RBP	32.41	■■■□□ 2.78
UBE3A-208	ENST00000625681	RGPD4	Q7Z3J3	1758 aa		32.41	■■■□□ 2.78
UBE3A-208	ENST00000625681	ACSBG1	Q96GR2	724 aa		32.41	■■■□□ 2.78
UBE3A-208	ENST00000625681	SYT17	Q9BSW7	474 aa		32.41	■■■□□ 2.78
UBE3A-208	ENST00000625681	TTC21A	Q8NDW8	1320 aa		32.38	■■■□□ 2.77
UBE3A-208	ENST00000625681	ZNF784	Q8NCA9	323 aa	Predicted RBP	32.37	■■■□□ 2.77
UBE3A-208	ENST00000625681	MTFR1L	Q9H019	292 aa		32.36	■■■□□ 2.77
UBE3A-208	ENST00000625681	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	32.35	■■■□□ 2.77	1e-6	■■□□□ 14.4
UBE3A-208	ENST00000625681	SIN3A	Q96ST3	1273 aa		32.35	■■■□□ 2.77
UBE3A-208	ENST00000625681	KTN1	Q86UP2	1357 aa	Known RBP	32.34	■■■□□ 2.77
UBE3A-208	ENST00000625681	CCDC7	Q96M83	1385 aa		32.34	■■■□□ 2.77
UBE3A-208	ENST00000625681	MYOM1	P52179	1685 aa		32.34	■■■□□ 2.77
UBE3A-208	ENST00000625681	SGIP1	Q9BQI5	828 aa		32.33	■■■□□ 2.77
UBE3A-208	ENST00000625681	NLRP2	Q9NX02	1062 aa		32.33	■■■□□ 2.77
UBE3A-208	ENST00000625681	NFAT5	O94916	1531 aa		32.31	■■■□□ 2.76
UBE3A-208	ENST00000625681	ROCK2	O75116	1388 aa	Known RBP	32.3	■■■□□ 2.76
UBE3A-208	ENST00000625681	WNK3	Q9BYP7	1800 aa		32.29	■■■□□ 2.76
UBE3A-208	ENST00000625681	RGPD5	Q99666	1765 aa		32.29	■■■□□ 2.76
UBE3A-208	ENST00000625681	TNS2	Q63HR2	1409 aa		32.28	■■■□□ 2.76
UBE3A-208	ENST00000625681	NEUROD1	Q13562	356 aa		32.28	■■■□□ 2.76
UBE3A-208	ENST00000625681	NME9	Q86XW9	330 aa		32.28	■■■□□ 2.76
UBE3A-208	ENST00000625681	ARX	Q96QS3	562 aa		32.27	■■■□□ 2.76
UBE3A-208	ENST00000625681	AKAP12	Q02952	1782 aa		32.27	■■■□□ 2.76
UBE3A-208	ENST00000625681	TRPM1	Q7Z4N2	1603 aa		32.26	■■■□□ 2.76
UBE3A-208	ENST00000625681	ERBB3	P21860	1342 aa		32.26	■■■□□ 2.75
UBE3A-208	ENST00000625681	IL2RB	P14784	551 aa		32.25	■■■□□ 2.75
UBE3A-208	ENST00000625681	ZNF827	Q17R98	1081 aa		32.24	■■■□□ 2.75
UBE3A-208	ENST00000625681	LRRC4B	Q9NT99	713 aa		32.23	■■■□□ 2.75
UBE3A-208	ENST00000625681	ANKRD24	Q8TF21	1146 aa		32.22	■■■□□ 2.75
UBE3A-208	ENST00000625681	USP31	Q70CQ4	1352 aa		32.2	■■■□□ 2.75
UBE3A-208	ENST00000625681	TMC1	Q8TDI8	760 aa		32.2	■■■□□ 2.75
UBE3A-208	ENST00000625681	SBNO2	Q9Y2G9	1366 aa		32.17	■■■□□ 2.74
UBE3A-208	ENST00000625681	DDX54	Q8TDD1	881 aa	Known RBP	32.16	■■■□□ 2.74
UBE3A-208	ENST00000625681	SLC12A5	Q9H2X9	1139 aa		32.16	■■■□□ 2.74
UBE3A-208	ENST00000625681	NHS	Q6T4R5	1651 aa		32.15	■■■□□ 2.74
UBE3A-208	ENST00000625681	GPR162	Q16538	588 aa		32.14	■■■□□ 2.74
UBE3A-208	ENST00000625681	KLHL34	Q8N239	644 aa		32.14	■■■□□ 2.74
UBE3A-208	ENST00000625681	ABCC6	O95255	1503 aa		32.14	■■■□□ 2.74
UBE3A-208	ENST00000625681	CD163L1	Q9NR16	1453 aa		32.13	■■■□□ 2.73
UBE3A-208	ENST00000625681	SENP3-EIF4A1	A0A087X0R7	540 aa		32.12	■■■□□ 2.73
UBE3A-208	ENST00000625681	KCNQ4	P56696	695 aa		32.12	■■■□□ 2.73
UBE3A-208	ENST00000625681	AKT1S1	Q96B36	256 aa		32.12	■■■□□ 2.73
UBE3A-208	ENST00000625681	LTV1	Q96GA3	475 aa	Predicted RBP	32.12	■■■□□ 2.73
UBE3A-208	ENST00000625681	GOLGB1	Q14789	3259 aa	Known RBP	32.11	■■■□□ 2.73
UBE3A-208	ENST00000625681	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	32.11	■■■□□ 2.73
UBE3A-208	ENST00000625681	C1QTNF8	P60827	252 aa		32.1	■■■□□ 2.73
UBE3A-208	ENST00000625681	PAPPA	Q13219	1627 aa		32.09	■■■□□ 2.73
UBE3A-208	ENST00000625681	MAP3K5	Q99683	1374 aa		32.08	■■■□□ 2.73
UBE3A-208	ENST00000625681	SYTL4	Q96C24	671 aa	Predicted RBP	32.07	■■■□□ 2.72
UBE3A-208	ENST00000625681	PELP1	Q8IZL8	1130 aa	Known RBP	32.06	■■■□□ 2.72
UBE3A-208	ENST00000625681	CARD11	Q9BXL7	1154 aa		32.06	■■■□□ 2.72
UBE3A-208	ENST00000625681	IP6K1	Q92551	441 aa		32.05	■■■□□ 2.72
UBE3A-208	ENST00000625681	TFCP2L1	Q9NZI6	479 aa		32.05	■■■□□ 2.72
UBE3A-208	ENST00000625681	PNPLA7	Q6ZV29	1317 aa		32.04	■■■□□ 2.72
UBE3A-208	ENST00000625681	MON2	Q7Z3U7	1717 aa		32.04	■■■□□ 2.72
UBE3A-208	ENST00000625681	POLD1	P28340	1107 aa		32.04	■■■□□ 2.72
UBE3A-208	ENST00000625681	PRIM1	P49642	420 aa	Known RBP	32.04	■■■□□ 2.72
UBE3A-208	ENST00000625681	SLC27A3	Q5K4L6	730 aa		32.04	■■■□□ 2.72
UBE3A-208	ENST00000625681	SLC16A10	Q8TF71	515 aa		32.04	■■■□□ 2.72
UBE3A-208	ENST00000625681	BTAF1	O14981	1849 aa		32.03	■■■□□ 2.72
UBE3A-208	ENST00000625681	TERF2IP	Q9NYB0	399 aa		32.02	■■■□□ 2.72
UBE3A-208	ENST00000625681	FBLN1	P23142	703 aa		32.01	■■■□□ 2.71
UBE3A-208	ENST00000625681	EDC4	Q6P2E9	1401 aa	Known RBP	32	■■■□□ 2.71
UBE3A-208	ENST00000625681		A0A1W2PP64	1363 aa		32	■■■□□ 2.71
UBE3A-208	ENST00000625681	NLGN2	Q8NFZ4	835 aa		32	■■■□□ 2.71
UBE3A-208	ENST00000625681	LTN1	O94822	1766 aa		31.96	■■■□□ 2.71
UBE3A-208	ENST00000625681	USP54	Q70EL1	1684 aa		31.95	■■■□□ 2.7
UBE3A-208	ENST00000625681	ZCRB1	Q8TBF4	217 aa	Known RBP	31.93	■■■□□ 2.7
UBE3A-208	ENST00000625681	MAP3K19	Q56UN5	1328 aa		31.93	■■■□□ 2.7
UBE3A-208	ENST00000625681	ANKRD36B	Q8N2N9	1353 aa		31.93	■■■□□ 2.7
UBE3A-208	ENST00000625681	KAT6B	Q8WYB5	2073 aa		31.92	■■■□□ 2.7
UBE3A-208	ENST00000625681	MSH5	O43196	834 aa		31.92	■■■□□ 2.7

Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms