RNA–Protein interactions for RNA: ENST00000625668.2

LINC02028-223, Transcript of long intergenic non-protein coding RNA 2028, human

TSL 5

Gene LINC02028, Length 646 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC02028-223	ENST00000625668	TEX14	Q8IWB6	1497 aa		10.81	□□□□□ -0.68
LINC02028-223	ENST00000625668	MAGI3	Q5TCQ9	1506 aa		10.81	□□□□□ -0.68
LINC02028-223	ENST00000625668	RETREG3	Q86VR2	466 aa		10.81	□□□□□ -0.68
LINC02028-223	ENST00000625668	HPS1	Q92902	700 aa		10.81	□□□□□ -0.68
LINC02028-223	ENST00000625668	TRO	Q12816	1431 aa	Predicted RBP	10.81	□□□□□ -0.68
LINC02028-223	ENST00000625668	TTC37	Q6PGP7	1564 aa		10.81	□□□□□ -0.68
LINC02028-223	ENST00000625668	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	10.8	□□□□□ -0.68
LINC02028-223	ENST00000625668	WFS1	O76024	890 aa		10.8	□□□□□ -0.68
LINC02028-223	ENST00000625668	NFX1	Q12986	1120 aa	Known RBP	10.8	□□□□□ -0.68
LINC02028-223	ENST00000625668	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	10.8	□□□□□ -0.68
LINC02028-223	ENST00000625668	NUTM1	Q86Y26	1132 aa		10.8	□□□□□ -0.68
LINC02028-223	ENST00000625668	CDK11A	Q9UQ88	783 aa	Predicted RBP	10.8	□□□□□ -0.68
LINC02028-223	ENST00000625668	KIF14	Q15058	1648 aa		10.8	□□□□□ -0.68
LINC02028-223	ENST00000625668	KDM6B	O15054	1643 aa		10.78	□□□□□ -0.68
LINC02028-223	ENST00000625668	PTCRA	Q6ISU1	281 aa	Predicted RBP	10.78	□□□□□ -0.68
LINC02028-223	ENST00000625668	ILDR2	Q71H61	639 aa		10.78	□□□□□ -0.68
LINC02028-223	ENST00000625668	TRIM47	Q96LD4	638 aa		10.78	□□□□□ -0.68
LINC02028-223	ENST00000625668	NUDT12	Q9BQG2	462 aa		10.78	□□□□□ -0.68
LINC02028-223	ENST00000625668	PCDHGC3	Q9UN70	934 aa		10.78	□□□□□ -0.68
LINC02028-223	ENST00000625668	TSPOAP1	O95153	1857 aa		10.77	□□□□□ -0.69
LINC02028-223	ENST00000625668	FDX1	P10109	184 aa		10.77	□□□□□ -0.69
LINC02028-223	ENST00000625668	SNRPB	P14678	240 aa	Known RBP	10.77	□□□□□ -0.69
LINC02028-223	ENST00000625668	KRI1	Q8N9T8	703 aa	Known RBP	10.77	□□□□□ -0.69
LINC02028-223	ENST00000625668	ADGRL1	O94910	1474 aa		10.76	□□□□□ -0.69
LINC02028-223	ENST00000625668	SIAH2	O43255	324 aa		10.76	□□□□□ -0.69
LINC02028-223	ENST00000625668	SENP2	Q9HC62	589 aa		10.76	□□□□□ -0.69
LINC02028-223	ENST00000625668	TIAM1	Q13009	1591 aa		10.75	□□□□□ -0.69
LINC02028-223	ENST00000625668	COL17A1	Q9UMD9	1497 aa	Predicted RBP	10.74	□□□□□ -0.69
LINC02028-223	ENST00000625668	EHBP1L1	Q8N3D4	1523 aa		10.74	□□□□□ -0.69
LINC02028-223	ENST00000625668	SSTR3	P32745	418 aa	Predicted RBP	10.74	□□□□□ -0.69
LINC02028-223	ENST00000625668	SPIRE2	Q8WWL2	714 aa		10.74	□□□□□ -0.69
LINC02028-223	ENST00000625668	MTUS2	Q5JR59	1369 aa		10.74	□□□□□ -0.69
LINC02028-223	ENST00000625668	NEO1	Q92859	1461 aa		10.74	□□□□□ -0.69
LINC02028-223	ENST00000625668	WIPF1	O43516	503 aa		10.73	□□□□□ -0.69
LINC02028-223	ENST00000625668	ALDH1A1	P00352	501 aa		10.73	□□□□□ -0.69
LINC02028-223	ENST00000625668	PLCH2	O75038	1416 aa		10.73	□□□□□ -0.69
LINC02028-223	ENST00000625668	FANCA	O15360	1455 aa		10.73	□□□□□ -0.69
LINC02028-223	ENST00000625668	C6orf229	H3BNL8	230 aa		10.72	□□□□□ -0.69
LINC02028-223	ENST00000625668	KIFC2	Q96AC6	838 aa		10.72	□□□□□ -0.69
LINC02028-223	ENST00000625668	CCNYL3	P0C7X3	344 aa		10.71	□□□□□ -0.69
LINC02028-223	ENST00000625668	MS4A1	P11836	297 aa		10.71	□□□□□ -0.69
LINC02028-223	ENST00000625668	SH3BP2	P78314	561 aa		10.71	□□□□□ -0.69
LINC02028-223	ENST00000625668	BARGIN	Q6ZT62	677 aa		10.71	□□□□□ -0.69
LINC02028-223	ENST00000625668	ARAP3	Q8WWN8	1544 aa		10.71	□□□□□ -0.69
LINC02028-223	ENST00000625668	CFAP74	Q9C0B2	1584 aa		10.7	□□□□□ -0.7
LINC02028-223	ENST00000625668	ARHGAP5	Q13017	1502 aa		10.7	□□□□□ -0.7
LINC02028-223	ENST00000625668	MAP3K1	Q13233	1512 aa		10.7	□□□□□ -0.7
LINC02028-223	ENST00000625668	LRRC9	Q6ZRR7	1453 aa		10.7	□□□□□ -0.7
LINC02028-223	ENST00000625668	TERT	O14746	1132 aa	Known RBP	10.7	□□□□□ -0.7
LINC02028-223	ENST00000625668	PTPRN	Q16849	979 aa		10.7	□□□□□ -0.7
LINC02028-223	ENST00000625668	LCE2C	Q5TA81	110 aa		10.7	□□□□□ -0.7
LINC02028-223	ENST00000625668	EHBP1	Q8NDI1	1231 aa		10.7	□□□□□ -0.7
LINC02028-223	ENST00000625668	MYO5C	Q9NQX4	1742 aa		10.7	□□□□□ -0.7
LINC02028-223	ENST00000625668	PREX2	Q70Z35	1606 aa		10.69	□□□□□ -0.7
LINC02028-223	ENST00000625668	AKNA	Q7Z591	1439 aa		10.69	□□□□□ -0.7
LINC02028-223	ENST00000625668	PHLDB1	Q86UU1	1377 aa		10.69	□□□□□ -0.7
LINC02028-223	ENST00000625668	NDUFV2	P19404	249 aa		10.69	□□□□□ -0.7
LINC02028-223	ENST00000625668	AMHR2	Q16671	573 aa		10.69	□□□□□ -0.7
LINC02028-223	ENST00000625668	EVA1B	Q9NVM1	165 aa		10.69	□□□□□ -0.7
LINC02028-223	ENST00000625668	MOXD2P	A6NHM9	499 aa		10.68	□□□□□ -0.7
LINC02028-223	ENST00000625668	ZMYND10	O75800	440 aa		10.68	□□□□□ -0.7
LINC02028-223	ENST00000625668	FRMPD1	Q5SYB0	1578 aa		10.68	□□□□□ -0.7
LINC02028-223	ENST00000625668	GPATCH8	Q9UKJ3	1502 aa	Known RBP	10.68	□□□□□ -0.7
LINC02028-223	ENST00000625668	NCOA2	Q15596	1464 aa		10.68	□□□□□ -0.7
LINC02028-223	ENST00000625668	CCNB3	Q8WWL7	1395 aa		10.67	□□□□□ -0.7
LINC02028-223	ENST00000625668	UNC93B1	Q9H1C4	597 aa		10.67	□□□□□ -0.7
LINC02028-223	ENST00000625668	DENND4B	O75064	1496 aa	Predicted RBP	10.67	□□□□□ -0.7
LINC02028-223	ENST00000625668	RAPGEF3	O95398	923 aa		10.66	□□□□□ -0.7
LINC02028-223	ENST00000625668	TTLL12	Q14166	644 aa	Predicted RBP	10.66	□□□□□ -0.7
LINC02028-223	ENST00000625668	KANK4	Q5T7N3	995 aa	Predicted RBP	10.66	□□□□□ -0.7
LINC02028-223	ENST00000625668	EFCAB2	Q5VUJ9	269 aa		10.66	□□□□□ -0.7
LINC02028-223	ENST00000625668	DESI1	Q6ICB0	168 aa		10.66	□□□□□ -0.7
LINC02028-223	ENST00000625668	POGZ	Q7Z3K3	1410 aa		10.66	□□□□□ -0.7
LINC02028-223	ENST00000625668	ABCC1	P33527	1531 aa		10.65	□□□□□ -0.7
LINC02028-223	ENST00000625668	KCNH2	Q12809	1159 aa		10.65	□□□□□ -0.7
LINC02028-223	ENST00000625668	PRR7	Q8TB68	274 aa		10.65	□□□□□ -0.7
LINC02028-223	ENST00000625668	WASF2	Q9Y6W5	498 aa		10.65	□□□□□ -0.7
LINC02028-223	ENST00000625668	SCAPER	Q9BY12	1400 aa		10.65	□□□□□ -0.7
LINC02028-223	ENST00000625668	SUPT6H	Q7KZ85	1726 aa	Known RBP	10.64	□□□□□ -0.71
LINC02028-223	ENST00000625668	SPDYE5	A6NIY4	337 aa		10.64	□□□□□ -0.71
LINC02028-223	ENST00000625668	MTMR2	Q13614	643 aa		10.64	□□□□□ -0.71
LINC02028-223	ENST00000625668	GIGYF2	Q6Y7W6	1299 aa	Known RBP	10.64	□□□□□ -0.71
LINC02028-223	ENST00000625668	TRIM46	Q7Z4K8	759 aa		10.64	□□□□□ -0.71
LINC02028-223	ENST00000625668	STK17A	Q9UEE5	414 aa		10.64	□□□□□ -0.71
LINC02028-223	ENST00000625668	SAMD9L	Q8IVG5	1584 aa		10.64	□□□□□ -0.71
LINC02028-223	ENST00000625668	CDC42BPA	Q5VT25	1732 aa		10.64	□□□□□ -0.71
LINC02028-223	ENST00000625668	CDC42BPB	Q9Y5S2	1711 aa		10.64	□□□□□ -0.71
LINC02028-223	ENST00000625668	CAPN5	O15484	640 aa	Predicted RBP	10.63	□□□□□ -0.71
LINC02028-223	ENST00000625668	GJA5	P36382	358 aa		10.63	□□□□□ -0.71
LINC02028-223	ENST00000625668	INSM1	Q01101	510 aa	Predicted RBP	10.63	□□□□□ -0.71
LINC02028-223	ENST00000625668	BAP1	Q92560	729 aa		10.63	□□□□□ -0.71
LINC02028-223	ENST00000625668	ARHGEF12	Q9NZN5	1544 aa		10.63	□□□□□ -0.71
LINC02028-223	ENST00000625668	ZC3H15	Q8WU90	426 aa	Known RBP	10.62	□□□□□ -0.71
LINC02028-223	ENST00000625668	CFDP1	Q9UEE9	299 aa	Predicted RBP	10.62	□□□□□ -0.71
LINC02028-223	ENST00000625668	ZNF777	Q9ULD5	760 aa	Predicted RBP	10.62	□□□□□ -0.71
LINC02028-223	ENST00000625668	ITSN2	Q9NZM3	1697 aa		10.62	□□□□□ -0.71
LINC02028-223	ENST00000625668	ZMYM4	Q5VZL5	1548 aa		10.62	□□□□□ -0.71
LINC02028-223	ENST00000625668	SYCP2	Q9BX26	1530 aa		10.62	□□□□□ -0.71
LINC02028-223	ENST00000625668	RICTOR	Q6R327	1708 aa		10.61	□□□□□ -0.71
LINC02028-223	ENST00000625668	BMP1	P13497	986 aa		10.61	□□□□□ -0.71

Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms