RNA–Protein interactions for RNA: ENST00000625275.2

R3HCC1-210, Transcript of R3H domain and coiled-coil containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene R3HCC1, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-210ENST00000625275 SBF2Q86WG5 1849 aa27.96■■■□□ 2.07
R3HCC1-210ENST00000625275 PDE3BQ13370 1112 aa27.95■■■□□ 2.06
R3HCC1-210ENST00000625275 PEAK1Q9H792 1746 aa27.93■■■□□ 2.06
R3HCC1-210ENST00000625275 ARHGEF25Q86VW2 580 aa27.93■■■□□ 2.06
R3HCC1-210ENST00000625275 TMC1Q8TDI8 760 aa27.93■■■□□ 2.06
R3HCC1-210ENST00000625275 SOX12O15370 315 aa27.92■■■□□ 2.06
R3HCC1-210ENST00000625275 RREB1Q92766 1687 aa27.92■■■□□ 2.06
R3HCC1-210ENST00000625275 USP31Q70CQ4 1352 aa27.92■■■□□ 2.06
R3HCC1-210ENST00000625275 EN1Q05925 392 aaPredicted RBP27.91■■■□□ 2.06
R3HCC1-210ENST00000625275 SRCAPQ6ZRS2 3230 aa27.91■■■□□ 2.06
R3HCC1-210ENST00000625275 WDR17Q8IZU2 1322 aa27.91■■■□□ 2.06
R3HCC1-210ENST00000625275 EDC4Q6P2E9 1401 aaKnown RBP27.9■■■□□ 2.06
R3HCC1-210ENST00000625275 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.9■■■□□ 2.06
R3HCC1-210ENST00000625275 PUS7Q96PZ0 661 aaKnown RBP27.9■■■□□ 2.06
R3HCC1-210ENST00000625275 AXIN2Q9Y2T1 843 aa27.9■■■□□ 2.06
R3HCC1-210ENST00000625275 LRP5O75197 1615 aa27.9■■■□□ 2.06
R3HCC1-210ENST00000625275 TRIM37O94972 964 aa27.89■■■□□ 2.06
R3HCC1-210ENST00000625275 TOM1L2Q6ZVM7 507 aa27.89■■■□□ 2.06
R3HCC1-210ENST00000625275 HDGFL2Q7Z4V5 671 aaPredicted RBP27.89■■■□□ 2.06
R3HCC1-210ENST00000625275 SLC12A5Q9H2X9 1139 aa27.89■■■□□ 2.06
R3HCC1-210ENST00000625275 A0A1W2PP64 1363 aa27.89■■■□□ 2.05
R3HCC1-210ENST00000625275 TESK2Q96S53 571 aa27.88■■■□□ 2.05
R3HCC1-210ENST00000625275 NUP188Q5SRE5 1749 aa27.87■■■□□ 2.05
R3HCC1-210ENST00000625275 ST20-MTHFSA0A0A6YYL1 179 aa27.87■■■□□ 2.05
R3HCC1-210ENST00000625275 TERF2IPQ9NYB0 399 aa27.87■■■□□ 2.05
R3HCC1-210ENST00000625275 NINLQ9Y2I6 1382 aa27.86■■■□□ 2.05
R3HCC1-210ENST00000625275 EIF4G2P78344 907 aaKnown RBP eCLIP27.86■■■□□ 2.05
R3HCC1-210ENST00000625275 NME9Q86XW9 330 aa27.86■■■□□ 2.05
R3HCC1-210ENST00000625275 OVOS2A0A0G2JMS6 1433 aa27.84■■■□□ 2.05
R3HCC1-210ENST00000625275 OVOS2A0A0J9YW53 1432 aa27.84■■■□□ 2.05
R3HCC1-210ENST00000625275 OVOS2Q6IE36 1432 aa27.84■■■□□ 2.05
R3HCC1-210ENST00000625275 RGPD3A6NKT7 1758 aaPredicted RBP27.84■■■□□ 2.05
R3HCC1-210ENST00000625275 RGPD4Q7Z3J3 1758 aa27.84■■■□□ 2.05
R3HCC1-210ENST00000625275 PARD3Q8TEW0 1356 aa27.83■■■□□ 2.05
R3HCC1-210ENST00000625275 HSPA5P11021 654 aaKnown RBP27.83■■■□□ 2.04
R3HCC1-210ENST00000625275 SLC24A1O60721 1099 aa27.82■■■□□ 2.04
R3HCC1-210ENST00000625275 EZH2Q15910 746 aaKnown RBP27.82■■■□□ 2.04
R3HCC1-210ENST00000625275 APBA3O96018 575 aa27.81■■■□□ 2.04
R3HCC1-210ENST00000625275 CSB-PGBD3P0DP91 1061 aa27.81■■■□□ 2.04
R3HCC1-210ENST00000625275 CAMKK2Q96RR4 588 aa27.81■■■□□ 2.04
R3HCC1-210ENST00000625275 PSDA5PKW4 1024 aaPredicted RBP27.8■■■□□ 2.04
R3HCC1-210ENST00000625275 C11orf95C9JLR9 678 aaPredicted RBP27.8■■■□□ 2.04
R3HCC1-210ENST00000625275 DDB1Q16531 1140 aa27.8■■■□□ 2.04
R3HCC1-210ENST00000625275 CARD10Q9BWT7 1032 aa27.8■■■□□ 2.04
R3HCC1-210ENST00000625275 FAM208AQ9UK61 1670 aaKnown RBP27.79■■■□□ 2.04
R3HCC1-210ENST00000625275 CDCA7Q9BWT1 371 aaPredicted RBP27.79■■■□□ 2.04
R3HCC1-210ENST00000625275 CCDC7Q96M83 1385 aa27.77■■■□□ 2.04
R3HCC1-210ENST00000625275 KIF20BQ96Q89 1820 aa27.76■■■□□ 2.03
R3HCC1-210ENST00000625275 ERBB3P21860 1342 aa27.74■■■□□ 2.03
R3HCC1-210ENST00000625275 KAT6BQ8WYB5 2073 aa27.73■■■□□ 2.03
R3HCC1-210ENST00000625275 MYOM1P52179 1685 aa27.73■■■□□ 2.03
R3HCC1-210ENST00000625275 ANKRD36BQ8N2N9 1353 aa27.73■■■□□ 2.03
R3HCC1-210ENST00000625275 R3HDM1Q15032 1099 aaKnown RBP27.72■■■□□ 2.03
R3HCC1-210ENST00000625275 TNS2Q63HR2 1409 aa27.72■■■□□ 2.03
R3HCC1-210ENST00000625275 TMF1P82094 1093 aa27.71■■■□□ 2.03
R3HCC1-210ENST00000625275 BCL9O00512 1426 aa27.71■■■□□ 2.03
R3HCC1-210ENST00000625275 MARCH10Q8NA82 808 aaPredicted RBP27.7■■■□□ 2.02
R3HCC1-210ENST00000625275 RGPD2P0DJD1 1756 aa27.69■■■□□ 2.02
R3HCC1-210ENST00000625275 NHSQ6T4R5 1651 aa27.68■■■□□ 2.02
R3HCC1-210ENST00000625275 NLRP2Q9NX02 1062 aa27.67■■■□□ 2.02
R3HCC1-210ENST00000625275 ANKRD24Q8TF21 1146 aa27.65■■■□□ 2.02
R3HCC1-210ENST00000625275 COG3Q96JB2 828 aa27.65■■■□□ 2.02
R3HCC1-210ENST00000625275 EXOC5O00471 708 aa27.64■■■□□ 2.02
R3HCC1-210ENST00000625275 BCL11BQ9C0K0 894 aaPredicted RBP27.64■■■□□ 2.01
R3HCC1-210ENST00000625275 CDCA8Q53HL2 280 aa27.62■■■□□ 2.01
R3HCC1-210ENST00000625275 IP6K1Q92551 441 aa27.62■■■□□ 2.01
R3HCC1-210ENST00000625275 NBPF14Q5TI25 921 aa27.61■■■□□ 2.01
R3HCC1-210ENST00000625275 BTAF1O14981 1849 aa27.6■■■□□ 2.01
R3HCC1-210ENST00000625275 PLSCR1O15162 318 aa27.6■■■□□ 2.01
R3HCC1-210ENST00000625275 IL2RBP14784 551 aa27.6■■■□□ 2.01
R3HCC1-210ENST00000625275 PTF1AQ7RTS3 328 aa27.6■■■□□ 2.01
R3HCC1-210ENST00000625275 MAP3K19Q56UN5 1328 aa27.59■■■□□ 2.01
R3HCC1-210ENST00000625275 SHANK3Q9BYB0 1731 aa27.57■■■□□ 2
R3HCC1-210ENST00000625275 RTL1A6NKG5 1358 aa27.57■■■□□ 2
R3HCC1-210ENST00000625275 FYB1O15117 783 aa27.55■■■□□ 2
R3HCC1-210ENST00000625275 HOXC9P31274 260 aa27.55■■■□□ 2
R3HCC1-210ENST00000625275 LTV1Q96GA3 475 aaPredicted RBP27.55■■■□□ 2
R3HCC1-210ENST00000625275 CASZ1Q86V15 1759 aa27.54■■■□□ 2
R3HCC1-210ENST00000625275 AMPHP49418 695 aa27.54■■■□□ 2
R3HCC1-210ENST00000625275 FBLN1P23142 703 aa27.53■■■□□ 2
R3HCC1-210ENST00000625275 GGNBP2Q9H3C7 697 aa27.53■■■□□ 2
R3HCC1-210ENST00000625275 KIF7Q2M1P5 1343 aa27.52■■■□□ 2
R3HCC1-210ENST00000625275 DOT1LQ8TEK3 1739 aa27.51■■□□□ 1.99
R3HCC1-210ENST00000625275 ANKRD26Q9UPS8 1709 aa27.5■■□□□ 1.99
R3HCC1-210ENST00000625275 MAP2P11137 1827 aaKnown RBP27.5■■□□□ 1.99
R3HCC1-210ENST00000625275 WASHC2AQ641Q2 1341 aa27.49■■□□□ 1.99
R3HCC1-210ENST00000625275 KCNQ2O43526 872 aa27.49■■□□□ 1.99
R3HCC1-210ENST00000625275 NSD3Q9BZ95 1437 aa27.49■■□□□ 1.99
R3HCC1-210ENST00000625275 RRS1Q15050 365 aaKnown RBP27.48■■□□□ 1.99
R3HCC1-210ENST00000625275 POLR3GLQ9BT43 218 aa27.48■■□□□ 1.99
R3HCC1-210ENST00000625275 PROM2Q8N271 834 aa27.47■■□□□ 1.99
R3HCC1-210ENST00000625275 ACSBG1Q96GR2 724 aa27.47■■□□□ 1.99
R3HCC1-210ENST00000625275 ANO8Q9HCE9 1232 aaPredicted RBP27.47■■□□□ 1.99
R3HCC1-210ENST00000625275 SMG6Q86US8 1419 aaKnown RBP27.46■■□□□ 1.99
R3HCC1-210ENST00000625275 TXNRD1Q16881 649 aa27.45■■□□□ 1.99
R3HCC1-210ENST00000625275 MEGF6O75095 1541 aa27.45■■□□□ 1.98
R3HCC1-210ENST00000625275 PAPPAQ13219 1627 aa27.45■■□□□ 1.98
R3HCC1-210ENST00000625275 CARD14Q9BXL6 1004 aa27.44■■□□□ 1.98
R3HCC1-210ENST00000625275 KIF24Q5T7B8 1368 aa27.43■■□□□ 1.98
R3HCC1-210ENST00000625275 FLT4P35916 1363 aa27.42■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms