RNA–Protein interactions for RNA: ENST00000622972.3

LINC00963-215, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 444 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-215ENST00000622972 SBNO1A3KN83 1393 aa8.41□□□□□ -1.06
LINC00963-215ENST00000622972 WASLO00401 505 aaPredicted RBP8.41□□□□□ -1.06
LINC00963-215ENST00000622972 GALR2O43603 387 aaPredicted RBP8.41□□□□□ -1.06
LINC00963-215ENST00000622972 MYOM1P52179 1685 aa8.4□□□□□ -1.06
LINC00963-215ENST00000622972 GABBR2O75899 941 aa8.4□□□□□ -1.06
LINC00963-215ENST00000622972 SF3B2Q13435 895 aaKnown RBP8.4□□□□□ -1.06
LINC00963-215ENST00000622972 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.38□□□□□ -1.07
LINC00963-215ENST00000622972 PRR36Q9H6K5 1346 aa8.38□□□□□ -1.07
LINC00963-215ENST00000622972 TIE1P35590 1138 aa8.38□□□□□ -1.07
LINC00963-215ENST00000622972 VPS72Q15906 364 aa8.38□□□□□ -1.07
LINC00963-215ENST00000622972 CCDC125Q86Z20 511 aa8.38□□□□□ -1.07
LINC00963-215ENST00000622972 SEPT12Q8IYM1 358 aa8.38□□□□□ -1.07
LINC00963-215ENST00000622972 NUDT16Q96DE0 195 aaKnown RBP8.38□□□□□ -1.07
LINC00963-215ENST00000622972 TMEM106CQ9BVX2 250 aa8.38□□□□□ -1.07
LINC00963-215ENST00000622972 SLIT2O94813 1529 aa8.38□□□□□ -1.07
LINC00963-215ENST00000622972 PLCH1Q4KWH8 1693 aa8.37□□□□□ -1.07
LINC00963-215ENST00000622972 FAM83GA6ND36 823 aa8.37□□□□□ -1.07
LINC00963-215ENST00000622972 GOLGA2Q08379 1002 aa8.37□□□□□ -1.07
LINC00963-215ENST00000622972 SP7Q8TDD2 431 aaPredicted RBP8.37□□□□□ -1.07
LINC00963-215ENST00000622972 CDK19Q9BWU1 502 aa8.37□□□□□ -1.07
LINC00963-215ENST00000622972 PRDM11Q9NQV5 511 aa8.37□□□□□ -1.07
LINC00963-215ENST00000622972 BTG4Q9NY30 223 aa8.37□□□□□ -1.07
LINC00963-215ENST00000622972 TRPC6Q9Y210 931 aa8.37□□□□□ -1.07
LINC00963-215ENST00000622972 ITSN1Q15811 1721 aa8.37□□□□□ -1.07
LINC00963-215ENST00000622972 ROCK2O75116 1388 aaKnown RBP8.36□□□□□ -1.07
LINC00963-215ENST00000622972 GLI3P10071 1580 aa8.36□□□□□ -1.07
LINC00963-215ENST00000622972 AKAP12Q02952 1782 aa8.36□□□□□ -1.07
LINC00963-215ENST00000622972 SRPK2P78362 688 aaKnown RBP8.36□□□□□ -1.07
LINC00963-215ENST00000622972 NUTM2GQ5VZR2 741 aa8.36□□□□□ -1.07
LINC00963-215ENST00000622972 ABCA3Q99758 1704 aa8.36□□□□□ -1.07
LINC00963-215ENST00000622972 NWD2Q9ULI1 1742 aa8.36□□□□□ -1.07
LINC00963-215ENST00000622972 ATP7BP35670 1465 aa8.36□□□□□ -1.07
LINC00963-215ENST00000622972 TRPM3Q9HCF6 1732 aaPredicted RBP8.35□□□□□ -1.07
LINC00963-215ENST00000622972 FAM98CQ17RN3 349 aaKnown RBP8.35□□□□□ -1.07
LINC00963-215ENST00000622972 KRT27Q7Z3Y8 459 aa8.35□□□□□ -1.07
LINC00963-215ENST00000622972 CABP2Q9NPB3 220 aa8.35□□□□□ -1.07
LINC00963-215ENST00000622972 STRN4Q9NRL3 753 aa8.35□□□□□ -1.07
LINC00963-215ENST00000622972 BRWD3Q6RI45 1802 aa8.35□□□□□ -1.07
LINC00963-215ENST00000622972 NRKQ7Z2Y5 1582 aa8.35□□□□□ -1.07
LINC00963-215ENST00000622972 CRYBG1Q9Y4K1 1723 aa8.34□□□□□ -1.07
LINC00963-215ENST00000622972 ACEP12821 1306 aa8.34□□□□□ -1.07
LINC00963-215ENST00000622972 EVA1CP58658 441 aa8.34□□□□□ -1.07
LINC00963-215ENST00000622972 ZC3H6P61129 1189 aaKnown RBP8.34□□□□□ -1.07
LINC00963-215ENST00000622972 CHRNA2Q15822 529 aa8.34□□□□□ -1.07
LINC00963-215ENST00000622972 DCBLD2Q96PD2 775 aa8.34□□□□□ -1.07
LINC00963-215ENST00000622972 MON2Q7Z3U7 1717 aa8.34□□□□□ -1.07
LINC00963-215ENST00000622972 USP47Q96K76 1375 aa8.34□□□□□ -1.07
LINC00963-215ENST00000622972 ALS2Q96Q42 1657 aa8.34□□□□□ -1.08
LINC00963-215ENST00000622972 CENPJQ9HC77 1338 aaPredicted RBP8.33□□□□□ -1.08
LINC00963-215ENST00000622972 COL14A1Q05707 1796 aaKnown RBP8.33□□□□□ -1.08
LINC00963-215ENST00000622972 ZBTB7CA1YPR0 619 aa8.33□□□□□ -1.08
LINC00963-215ENST00000622972 BLMP54132 1417 aaPredicted RBP8.33□□□□□ -1.08
LINC00963-215ENST00000622972 DEFB132Q7Z7B7 95 aa8.33□□□□□ -1.08
LINC00963-215ENST00000622972 ABTB2Q8N961 1025 aa8.33□□□□□ -1.08
LINC00963-215ENST00000622972 TESK2Q96S53 571 aa8.33□□□□□ -1.08
LINC00963-215ENST00000622972 TIMELESSQ9UNS1 1208 aa8.33□□□□□ -1.08
LINC00963-215ENST00000622972 TTLL13PA6NNM8 815 aa8.32□□□□□ -1.08
LINC00963-215ENST00000622972 BAG6P46379 1132 aa8.32□□□□□ -1.08
LINC00963-215ENST00000622972 PAXIP1Q6ZW49 1069 aaPredicted RBP8.32□□□□□ -1.08
LINC00963-215ENST00000622972 SPRYD3Q8NCJ5 442 aa8.32□□□□□ -1.08
LINC00963-215ENST00000622972 CFAP44Q96MT7 982 aa8.32□□□□□ -1.08
LINC00963-215ENST00000622972 BMP2KQ9NSY1 1161 aaPredicted RBP8.32□□□□□ -1.08
LINC00963-215ENST00000622972 USP35Q9P2H5 1018 aa8.32□□□□□ -1.08
LINC00963-215ENST00000622972 KIAA0232Q92628 1395 aa8.32□□□□□ -1.08
LINC00963-215ENST00000622972 SBNO2Q9Y2G9 1366 aa8.32□□□□□ -1.08
LINC00963-215ENST00000622972 ONECUT3O60422 494 aaPredicted RBP8.31□□□□□ -1.08
LINC00963-215ENST00000622972 MKRN3Q13064 507 aaKnown RBP8.31□□□□□ -1.08
LINC00963-215ENST00000622972 FAM182BQ5T319 152 aa8.31□□□□□ -1.08
LINC00963-215ENST00000622972 NLRP13Q86W25 1043 aa8.31□□□□□ -1.08
LINC00963-215ENST00000622972 CARD11Q9BXL7 1154 aa8.31□□□□□ -1.08
LINC00963-215ENST00000622972 NRAPQ86VF7 1730 aa8.31□□□□□ -1.08
LINC00963-215ENST00000622972 CD163L1Q9NR16 1453 aa8.31□□□□□ -1.08
LINC00963-215ENST00000622972 SPATA31A5Q5VU36 1347 aa8.3□□□□□ -1.08
LINC00963-215ENST00000622972 SPATA31A7Q8IWB4 1347 aa8.3□□□□□ -1.08
LINC00963-215ENST00000622972 PPIP5K1Q6PFW1 1433 aa8.3□□□□□ -1.08
LINC00963-215ENST00000622972 PLEKHG3A1L390 1219 aa8.3□□□□□ -1.08
LINC00963-215ENST00000622972 PLCB2Q00722 1185 aa8.3□□□□□ -1.08
LINC00963-215ENST00000622972 EFCAB3Q8N7B9 438 aa8.3□□□□□ -1.08
LINC00963-215ENST00000622972 RYDENQ9NUL5 291 aaKnown RBP8.3□□□□□ -1.08
LINC00963-215ENST00000622972 EVC2Q86UK5 1308 aa8.29□□□□□ -1.08
LINC00963-215ENST00000622972 ST20-MTHFSA0A0A6YYL1 179 aa8.29□□□□□ -1.08
LINC00963-215ENST00000622972 NLRP6P59044 892 aa8.29□□□□□ -1.08
LINC00963-215ENST00000622972 CABP1Q9NZU7 370 aa8.29□□□□□ -1.08
LINC00963-215ENST00000622972 TRIM35Q9UPQ4 493 aa8.29□□□□□ -1.08
LINC00963-215ENST00000622972 POLR3AO14802 1390 aaPredicted RBP8.29□□□□□ -1.08
LINC00963-215ENST00000622972 PIK3C2AO00443 1686 aa8.29□□□□□ -1.08
LINC00963-215ENST00000622972 PHRF1Q9P1Y6 1649 aaKnown RBP8.29□□□□□ -1.08
LINC00963-215ENST00000622972 C11orf95C9JLR9 678 aaPredicted RBP8.28□□□□□ -1.08
LINC00963-215ENST00000622972 SOX12O15370 315 aa8.28□□□□□ -1.08
LINC00963-215ENST00000622972 ATMINO43313 823 aaPredicted RBP8.28□□□□□ -1.08
LINC00963-215ENST00000622972 PDE3BQ13370 1112 aa8.28□□□□□ -1.08
LINC00963-215ENST00000622972 NKX1-1Q15270 411 aaPredicted RBP8.28□□□□□ -1.08
LINC00963-215ENST00000622972 SPATA31A1Q5TZJ5 1347 aa8.28□□□□□ -1.08
LINC00963-215ENST00000622972 USP54Q70EL1 1684 aa8.27□□□□□ -1.08
LINC00963-215ENST00000622972 GCP02774 474 aa8.27□□□□□ -1.09
LINC00963-215ENST00000622972 HSPA5P11021 654 aaKnown RBP8.27□□□□□ -1.09
LINC00963-215ENST00000622972 ATN1P54259 1190 aaPredicted RBP8.27□□□□□ -1.09
LINC00963-215ENST00000622972 EN1Q05925 392 aaPredicted RBP8.27□□□□□ -1.09
LINC00963-215ENST00000622972 ASTLQ6HA08 431 aaPredicted RBP8.27□□□□□ -1.09
LINC00963-215ENST00000622972 PSDA5PKW4 1024 aaPredicted RBP8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms