RNA–Protein interactions for RNA: ENST00000621323.4

PDE4D-227, Transcript of phosphodiesterase 4D, humanhuman

TSL 3

Gene PDE4D, Length 709 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-227ENST00000621323 NBPF8Q3BBV2 869 aa9.89□□□□□ -0.83
PDE4D-227ENST00000621323 NBPF14Q5TI25 921 aa9.89□□□□□ -0.83
PDE4D-227ENST00000621323 FAM196AQ6ZSG2 479 aa9.89□□□□□ -0.83
PDE4D-227ENST00000621323 ZFP91Q96JP5 570 aaPredicted RBP9.89□□□□□ -0.83
PDE4D-227ENST00000621323 CHD4Q14839 1912 aa9.89□□□□□ -0.83
PDE4D-227ENST00000621323 RRBP1Q9P2E9 1410 aaKnown RBP9.89□□□□□ -0.83
PDE4D-227ENST00000621323 SBNO1A3KN83 1393 aa9.88□□□□□ -0.83
PDE4D-227ENST00000621323 FMN2Q9NZ56 1722 aa9.88□□□□□ -0.83
PDE4D-227ENST00000621323 PELP1Q8IZL8 1130 aaKnown RBP9.88□□□□□ -0.83
PDE4D-227ENST00000621323 COL14A1Q05707 1796 aaKnown RBP9.88□□□□□ -0.83
PDE4D-227ENST00000621323 PLEKHH1Q9ULM0 1364 aa9.88□□□□□ -0.83
PDE4D-227ENST00000621323 SHANK3Q9BYB0 1731 aa9.87□□□□□ -0.83
PDE4D-227ENST00000621323 RYDENQ9NUL5 291 aaKnown RBP9.87□□□□□ -0.83
PDE4D-227ENST00000621323 TECPR2O15040 1411 aa9.87□□□□□ -0.83
PDE4D-227ENST00000621323 ARHGEF10O15013 1369 aa9.87□□□□□ -0.83
PDE4D-227ENST00000621323 NRXN1Q9ULB1 1477 aa9.86□□□□□ -0.83
PDE4D-227ENST00000621323 POTEJP0CG39 1038 aa9.86□□□□□ -0.83
PDE4D-227ENST00000621323 SYT17Q9BSW7 474 aa9.86□□□□□ -0.83
PDE4D-227ENST00000621323 FHDC1Q9C0D6 1143 aaPredicted RBP9.86□□□□□ -0.83
PDE4D-227ENST00000621323 SPATA31A1Q5TZJ5 1347 aa9.85□□□□□ -0.83
PDE4D-227ENST00000621323 ZBTB7AO95365 584 aa9.85□□□□□ -0.83
PDE4D-227ENST00000621323 CHRM1P11229 460 aaPredicted RBP9.85□□□□□ -0.83
PDE4D-227ENST00000621323 WAPLQ7Z5K2 1190 aa9.85□□□□□ -0.83
PDE4D-227ENST00000621323 NUP155O75694 1391 aa9.85□□□□□ -0.83
PDE4D-227ENST00000621323 DLC1Q96QB1 1528 aa9.84□□□□□ -0.83
PDE4D-227ENST00000621323 NKX1-1Q15270 411 aaPredicted RBP9.84□□□□□ -0.83
PDE4D-227ENST00000621323 SGIP1Q9BQI5 828 aa9.84□□□□□ -0.83
PDE4D-227ENST00000621323 TRPM3Q9HCF6 1732 aaPredicted RBP9.83□□□□□ -0.84
PDE4D-227ENST00000621323 CRYBG1Q9Y4K1 1723 aa9.83□□□□□ -0.84
PDE4D-227ENST00000621323 GTPBP6O43824 516 aaPredicted RBP9.82□□□□□ -0.84
PDE4D-227ENST00000621323 LMOD2Q6P5Q4 547 aa9.82□□□□□ -0.84
PDE4D-227ENST00000621323 PHF8Q9UPP1 1060 aa9.82□□□□□ -0.84
PDE4D-227ENST00000621323 ALS2Q96Q42 1657 aa9.82□□□□□ -0.84
PDE4D-227ENST00000621323 RGPD3A6NKT7 1758 aaPredicted RBP9.82□□□□□ -0.84
PDE4D-227ENST00000621323 RGPD4Q7Z3J3 1758 aa9.82□□□□□ -0.84
PDE4D-227ENST00000621323 PSME1Q06323 249 aa9.81□□□□□ -0.84
PDE4D-227ENST00000621323 ZNF467Q7Z7K2 595 aaPredicted RBP9.81□□□□□ -0.84
PDE4D-227ENST00000621323 MAP3K5Q99683 1374 aa9.8□□□□□ -0.84
PDE4D-227ENST00000621323 PAK3O75914 559 aaPredicted RBP9.8□□□□□ -0.84
PDE4D-227ENST00000621323 RGPD8O14715 1765 aaPredicted RBP9.8□□□□□ -0.84
PDE4D-227ENST00000621323 KNDC1Q76NI1 1749 aa9.79□□□□□ -0.84
PDE4D-227ENST00000621323 PEAK1Q9H792 1746 aa9.79□□□□□ -0.84
PDE4D-227ENST00000621323 IFT172Q9UG01 1749 aa9.79□□□□□ -0.84
PDE4D-227ENST00000621323 METRNQ9UJH8 293 aa9.79□□□□□ -0.84
PDE4D-227ENST00000621323 ROCK1Q13464 1354 aa9.78□□□□□ -0.84
PDE4D-227ENST00000621323 ABCC11Q96J66 1382 aa9.78□□□□□ -0.84
PDE4D-227ENST00000621323 HSPA6P17066 643 aa9.78□□□□□ -0.84
PDE4D-227ENST00000621323 PTF1AQ7RTS3 328 aa9.78□□□□□ -0.84
PDE4D-227ENST00000621323 STK26Q9P289 416 aa9.78□□□□□ -0.84
PDE4D-227ENST00000621323 PCNTO95613 3336 aa9.78□□□□□ -0.84
PDE4D-227ENST00000621323 PPLO60437 1756 aa9.78□□□□□ -0.84
PDE4D-227ENST00000621323 SSH2Q76I76 1423 aa9.77□□□□□ -0.85
PDE4D-227ENST00000621323 FAM50AQ14320 339 aaKnown RBP9.77□□□□□ -0.85
PDE4D-227ENST00000621323 BARGINQ6ZT62 677 aa9.77□□□□□ -0.85
PDE4D-227ENST00000621323 CDAN1Q8IWY9 1227 aa9.77□□□□□ -0.85
PDE4D-227ENST00000621323 PHF12Q96QT6 1004 aa9.77□□□□□ -0.85
PDE4D-227ENST00000621323 PRDM11Q9NQV5 511 aa9.77□□□□□ -0.85
PDE4D-227ENST00000621323 KIAA0232Q92628 1395 aa9.76□□□□□ -0.85
PDE4D-227ENST00000621323 PLSCR1O15162 318 aa9.76□□□□□ -0.85
PDE4D-227ENST00000621323 PDE3BQ13370 1112 aa9.76□□□□□ -0.85
PDE4D-227ENST00000621323 KIF1BO60333 1816 aa9.76□□□□□ -0.85
PDE4D-227ENST00000621323 ADGRF5Q8IZF2 1346 aa9.76□□□□□ -0.85
PDE4D-227ENST00000621323 ATP10DQ9P241 1426 aa9.75□□□□□ -0.85
PDE4D-227ENST00000621323 SLC34A2O95436 690 aa9.75□□□□□ -0.85
PDE4D-227ENST00000621323 CHRNA2Q15822 529 aa9.75□□□□□ -0.85
PDE4D-227ENST00000621323 MTFR1LQ9H019 292 aa9.75□□□□□ -0.85
PDE4D-227ENST00000621323 STRN4Q9NRL3 753 aa9.75□□□□□ -0.85
PDE4D-227ENST00000621323 USP35Q9P2H5 1018 aa9.75□□□□□ -0.85
PDE4D-227ENST00000621323 PARP4Q9UKK3 1724 aaKnown RBP9.74□□□□□ -0.85
PDE4D-227ENST00000621323 PDAP1Q13442 181 aaKnown RBP9.74□□□□□ -0.85
PDE4D-227ENST00000621323 PMFBP1Q8TBY8 1022 aa9.74□□□□□ -0.85
PDE4D-227ENST00000621323 ARXQ96QS3 562 aa9.74□□□□□ -0.85
PDE4D-227ENST00000621323 RPGRIP1LQ68CZ1 1315 aa9.74□□□□□ -0.85
PDE4D-227ENST00000621323 OVOS2A0A0G2JMS6 1433 aa9.73□□□□□ -0.85
PDE4D-227ENST00000621323 OVOS2A0A0J9YW53 1432 aa9.73□□□□□ -0.85
PDE4D-227ENST00000621323 OVOS2Q6IE36 1432 aa9.73□□□□□ -0.85
PDE4D-227ENST00000621323 GPR162Q16538 588 aa9.73□□□□□ -0.85
PDE4D-227ENST00000621323 TMEM132EQ6IEE7 984 aa9.73□□□□□ -0.85
PDE4D-227ENST00000621323 MAMSTRQ6ZN01 415 aa9.73□□□□□ -0.85
PDE4D-227ENST00000621323 WDR70Q9NW82 654 aa9.73□□□□□ -0.85
PDE4D-227ENST00000621323 ANKARQ7Z5J8 1434 aa9.73□□□□□ -0.85
PDE4D-227ENST00000621323 YTHDC2Q9H6S0 1430 aaKnown RBP9.73□□□□□ -0.85
PDE4D-227ENST00000621323 ATP7BP35670 1465 aa9.72□□□□□ -0.85
PDE4D-227ENST00000621323 PHRF1Q9P1Y6 1649 aaKnown RBP9.72□□□□□ -0.85
PDE4D-227ENST00000621323 LARP1Q6PKG0 1096 aaKnown RBP9.72□□□□□ -0.85
PDE4D-227ENST00000621323 PCDHB8Q9UN66 801 aa9.72□□□□□ -0.85
PDE4D-227ENST00000621323 PCDHB13Q9Y5F0 798 aa9.72□□□□□ -0.85
PDE4D-227ENST00000621323 ACIN1Q9UKV3 1341 aaKnown RBP9.72□□□□□ -0.85
PDE4D-227ENST00000621323 SBF2Q86WG5 1849 aa9.72□□□□□ -0.85
PDE4D-227ENST00000621323 LRRC37A3O60309 1634 aa9.71□□□□□ -0.85
PDE4D-227ENST00000621323 LMO7Q8WWI1 1683 aa9.71□□□□□ -0.85
PDE4D-227ENST00000621323 SLC15A2Q16348 729 aa9.71□□□□□ -0.86
PDE4D-227ENST00000621323 COL13A1Q5TAT6 717 aaPredicted RBP9.71□□□□□ -0.86
PDE4D-227ENST00000621323 TCP11L2Q8N4U5 519 aa9.71□□□□□ -0.86
PDE4D-227ENST00000621323 ADCY9O60503 1353 aa9.71□□□□□ -0.86
PDE4D-227ENST00000621323 PAPPAQ13219 1627 aa9.71□□□□□ -0.86
PDE4D-227ENST00000621323 STK32BQ9NY57 414 aa9.7□□□□□ -0.86
PDE4D-227ENST00000621323 PRR36Q9H6K5 1346 aa9.7□□□□□ -0.86
PDE4D-227ENST00000621323 PIK3C2GO75747 1445 aa9.7□□□□□ -0.86
PDE4D-227ENST00000621323 YBX3P16989 372 aaKnown RBP eCLIP9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms