RNA–Protein interactions for RNA: ENST00000621040.4

GTF2I-219, Transcript of general transcription factor IIi, humanhuman

TSL 2

Gene GTF2I, Length 3,437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2I-219ENST00000621040 NHSQ6T4R5 1651 aa11.92□□□□□ -0.5
GTF2I-219ENST00000621040 EIF4G2P78344 907 aaKnown RBP eCLIP11.92□□□□□ -0.5
GTF2I-219ENST00000621040 CARD14Q9BXL6 1004 aa11.92□□□□□ -0.5
GTF2I-219ENST00000621040 SOCS7O14512 581 aa11.92□□□□□ -0.5
GTF2I-219ENST00000621040 ARHGEF25Q86VW2 580 aa11.92□□□□□ -0.5
GTF2I-219ENST00000621040 TRPC5Q9UL62 973 aaPredicted RBP11.92□□□□□ -0.5
GTF2I-219ENST00000621040 RBM6P78332 1123 aaKnown RBP11.92□□□□□ -0.5
GTF2I-219ENST00000621040 NLRP13Q86W25 1043 aa11.92□□□□□ -0.5
GTF2I-219ENST00000621040 NUTM2BA6NNL0 878 aaPredicted RBP11.91□□□□□ -0.5
GTF2I-219ENST00000621040 NUTM2EB1AL46 878 aaPredicted RBP11.91□□□□□ -0.5
GTF2I-219ENST00000621040 GCP02774 474 aa11.91□□□□□ -0.5
GTF2I-219ENST00000621040 NUTM2AQ8IVF1 878 aaPredicted RBP11.91□□□□□ -0.5
GTF2I-219ENST00000621040 C8orf37Q96NL8 207 aa11.91□□□□□ -0.5
GTF2I-219ENST00000621040 USP21Q9UK80 565 aa11.91□□□□□ -0.5
GTF2I-219ENST00000621040 NSD2O96028 1365 aa11.91□□□□□ -0.5
GTF2I-219ENST00000621040 TERF2IPQ9NYB0 399 aa11.91□□□□□ -0.5
GTF2I-219ENST00000621040 NPC1L1Q9UHC9 1359 aa11.91□□□□□ -0.5
GTF2I-219ENST00000621040 CRB1P82279 1406 aa11.9□□□□□ -0.5
GTF2I-219ENST00000621040 NSD3Q9BZ95 1437 aa11.9□□□□□ -0.5
GTF2I-219ENST00000621040 PLEKHG2Q9H7P9 1386 aa11.9□□□□□ -0.5
GTF2I-219ENST00000621040 ABTB2Q8N961 1025 aa11.9□□□□□ -0.5
GTF2I-219ENST00000621040 VIRMAQ69YN4 1812 aaKnown RBP11.9□□□□□ -0.51
GTF2I-219ENST00000621040 MEX3CQ5U5Q3 659 aaKnown RBP11.89□□□□□ -0.51
GTF2I-219ENST00000621040 GJD4Q96KN9 370 aaPredicted RBP11.89□□□□□ -0.51
GTF2I-219ENST00000621040 PHF23Q9BUL5 403 aaPredicted RBP11.89□□□□□ -0.51
GTF2I-219ENST00000621040 SPATA31A1Q5TZJ5 1347 aa11.89□□□□□ -0.51
GTF2I-219ENST00000621040 ADAMTS2O95450 1211 aa11.89□□□□□ -0.51
GTF2I-219ENST00000621040 ADAMTS7Q9UKP4 1686 aa11.89□□□□□ -0.51
GTF2I-219ENST00000621040 EP400Q96L91 3159 aa11.89□□□□□ -0.51
GTF2I-219ENST00000621040 HDGFL2Q7Z4V5 671 aaPredicted RBP11.89□□□□□ -0.51
GTF2I-219ENST00000621040 KCNH5Q8NCM2 988 aa11.89□□□□□ -0.51
GTF2I-219ENST00000621040 QTRT2Q9H974 415 aaKnown RBP11.88□□□□□ -0.51
GTF2I-219ENST00000621040 KIF7Q2M1P5 1343 aa11.88□□□□□ -0.51
GTF2I-219ENST00000621040 CCDC7Q96M83 1385 aa11.88□□□□□ -0.51
GTF2I-219ENST00000621040 NUP188Q5SRE5 1749 aa11.88□□□□□ -0.51
GTF2I-219ENST00000621040 BARGINQ6ZT62 677 aa11.88□□□□□ -0.51
GTF2I-219ENST00000621040 NME9Q86XW9 330 aa11.88□□□□□ -0.51
GTF2I-219ENST00000621040 TOGARAM1Q9Y4F4 1720 aa11.87□□□□□ -0.51
GTF2I-219ENST00000621040 FYB1O15117 783 aa11.87□□□□□ -0.51
GTF2I-219ENST00000621040 RXRBP28702 533 aa11.87□□□□□ -0.51
GTF2I-219ENST00000621040 NGLY1Q96IV0 654 aa11.87□□□□□ -0.51
GTF2I-219ENST00000621040 QSER1Q2KHR3 1735 aa11.87□□□□□ -0.51
GTF2I-219ENST00000621040 COL3A1P02461 1466 aaPredicted RBP11.86□□□□□ -0.51
GTF2I-219ENST00000621040 ZRANB1Q9UGI0 708 aa11.86□□□□□ -0.51
GTF2I-219ENST00000621040 CICQ96RK0 1608 aaPredicted RBP11.86□□□□□ -0.51
GTF2I-219ENST00000621040 LY75O60449 1722 aa11.85□□□□□ -0.51
GTF2I-219ENST00000621040 COL24A1Q17RW2 1714 aa11.85□□□□□ -0.51
GTF2I-219ENST00000621040 THRAP3Q9Y2W1 955 aaKnown RBP11.85□□□□□ -0.51
GTF2I-219ENST00000621040 PER1O15534 1290 aaPredicted RBP11.85□□□□□ -0.51
GTF2I-219ENST00000621040 AXIN2Q9Y2T1 843 aa11.85□□□□□ -0.51
GTF2I-219ENST00000621040 ZNF831Q5JPB2 1677 aa11.85□□□□□ -0.51
GTF2I-219ENST00000621040 WDR17Q8IZU2 1322 aa11.85□□□□□ -0.51
GTF2I-219ENST00000621040 PAK3O75914 559 aaPredicted RBP11.85□□□□□ -0.51
GTF2I-219ENST00000621040 BTG4Q9NY30 223 aa11.85□□□□□ -0.51
GTF2I-219ENST00000621040 SALL2Q9Y467 1007 aaPredicted RBP11.85□□□□□ -0.51
GTF2I-219ENST00000621040 PAPPAQ13219 1627 aa11.84□□□□□ -0.51
GTF2I-219ENST00000621040 WASHC2AQ641Q2 1341 aa11.84□□□□□ -0.51
GTF2I-219ENST00000621040 NLRP6P59044 892 aa11.84□□□□□ -0.51
GTF2I-219ENST00000621040 INSRP06213 1382 aa11.84□□□□□ -0.51
GTF2I-219ENST00000621040 RBM19Q9Y4C8 960 aaKnown RBP11.84□□□□□ -0.51
GTF2I-219ENST00000621040 TNS2Q63HR2 1409 aa11.84□□□□□ -0.51
GTF2I-219ENST00000621040 DOT1LQ8TEK3 1739 aa11.83□□□□□ -0.51
GTF2I-219ENST00000621040 ERBB3P21860 1342 aa11.82□□□□□ -0.52
GTF2I-219ENST00000621040 MSH5O43196 834 aa11.82□□□□□ -0.52
GTF2I-219ENST00000621040 ITGB4P16144 1822 aa11.82□□□□□ -0.52
GTF2I-219ENST00000621040 NUTM2GQ5VZR2 741 aa11.82□□□□□ -0.52
GTF2I-219ENST00000621040 PRDM11Q9NQV5 511 aa11.82□□□□□ -0.52
GTF2I-219ENST00000621040 BTAF1O14981 1849 aa11.81□□□□□ -0.52
GTF2I-219ENST00000621040 AMER1Q5JTC6 1135 aaPredicted RBP11.81□□□□□ -0.52
GTF2I-219ENST00000621040 IP6K1Q92551 441 aa11.81□□□□□ -0.52
GTF2I-219ENST00000621040 CGNL1Q0VF96 1302 aa11.8□□□□□ -0.52
GTF2I-219ENST00000621040 SIPA1L3O60292 1781 aaPredicted RBP11.8□□□□□ -0.52
GTF2I-219ENST00000621040 MAP3K19Q56UN5 1328 aa11.8□□□□□ -0.52
GTF2I-219ENST00000621040 TMC1Q8TDI8 760 aa11.8□□□□□ -0.52
GTF2I-219ENST00000621040 CARD10Q9BWT7 1032 aa11.8□□□□□ -0.52
GTF2I-219ENST00000621040 OVOS2A0A0G2JMS6 1433 aa11.79□□□□□ -0.52
GTF2I-219ENST00000621040 CHRNA2Q15822 529 aa11.79□□□□□ -0.52
GTF2I-219ENST00000621040 ZC3H6P61129 1189 aaKnown RBP11.79□□□□□ -0.52
GTF2I-219ENST00000621040 LARP1Q6PKG0 1096 aaKnown RBP11.79□□□□□ -0.52
GTF2I-219ENST00000621040 FLT4P35916 1363 aa11.79□□□□□ -0.52
GTF2I-219ENST00000621040 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.79□□□□□ -0.52
GTF2I-219ENST00000621040 SCN11AQ9UI33 1791 aa11.78□□□□□ -0.52
GTF2I-219ENST00000621040 UPF1Q92900 1129 aaKnown RBP eCLIP11.78□□□□□ -0.52
GTF2I-219ENST00000621040 POLR3GLQ9BT43 218 aa11.78□□□□□ -0.52
GTF2I-219ENST00000621040 MEGF6O75095 1541 aa11.78□□□□□ -0.52
GTF2I-219ENST00000621040 CASZ1Q86V15 1759 aa11.78□□□□□ -0.52
GTF2I-219ENST00000621040 HOXC9P31274 260 aa11.78□□□□□ -0.52
GTF2I-219ENST00000621040 DEKP35659 375 aaKnown RBP11.77□□□□□ -0.53
GTF2I-219ENST00000621040 LMOD2Q6P5Q4 547 aa11.77□□□□□ -0.53
GTF2I-219ENST00000621040 TAF1LQ8IZX4 1826 aa11.77□□□□□ -0.53
GTF2I-219ENST00000621040 FANCIQ9NVI1 1328 aa11.77□□□□□ -0.53
GTF2I-219ENST00000621040 TUBGCP6Q96RT7 1819 aa11.77□□□□□ -0.53
GTF2I-219ENST00000621040 COG3Q96JB2 828 aa11.77□□□□□ -0.53
GTF2I-219ENST00000621040 PANK3Q9H999 370 aa11.77□□□□□ -0.53
GTF2I-219ENST00000621040 TCP11L2Q8N4U5 519 aa11.76□□□□□ -0.53
GTF2I-219ENST00000621040 SEPT12Q8IYM1 358 aa11.76□□□□□ -0.53
GTF2I-219ENST00000621040 LRP5O75197 1615 aa11.75□□□□□ -0.53
GTF2I-219ENST00000621040 CDCA7Q9BWT1 371 aaPredicted RBP11.74□□□□□ -0.53
GTF2I-219ENST00000621040 UBR2Q8IWV8 1755 aa11.74□□□□□ -0.53
GTF2I-219ENST00000621040 GGNBP2Q9H3C7 697 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms