RNA–Protein interactions for RNA: ENST00000619890.1

SSX4B-202, Transcript of SSX family member 4B, humanhuman

TSL 5 BASIC

Gene SSX4B, Length 1,092 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4B-202ENST00000619890 SGIP1Q9BQI5 828 aa8.72□□□□□ -1.01
SSX4B-202ENST00000619890 SPATA31A1Q5TZJ5 1347 aa8.72□□□□□ -1.01
SSX4B-202ENST00000619890 THSD7AQ9UPZ6 1657 aa8.72□□□□□ -1.01
SSX4B-202ENST00000619890 TNS3Q68CZ2 1445 aa8.71□□□□□ -1.01
SSX4B-202ENST00000619890 ANKARQ7Z5J8 1434 aa8.71□□□□□ -1.01
SSX4B-202ENST00000619890 TULP4Q9NRJ4 1543 aa8.71□□□□□ -1.01
SSX4B-202ENST00000619890 PLSCR1O15162 318 aa8.71□□□□□ -1.02
SSX4B-202ENST00000619890 GALR2O43603 387 aaPredicted RBP8.71□□□□□ -1.02
SSX4B-202ENST00000619890 PDE3BQ13370 1112 aa8.71□□□□□ -1.02
SSX4B-202ENST00000619890 WAPLQ7Z5K2 1190 aa8.71□□□□□ -1.02
SSX4B-202ENST00000619890 STK26Q9P289 416 aa8.71□□□□□ -1.02
SSX4B-202ENST00000619890 PLEKHH1Q9ULM0 1364 aa8.71□□□□□ -1.02
SSX4B-202ENST00000619890 QRICH2Q9H0J4 1663 aa8.7□□□□□ -1.02
SSX4B-202ENST00000619890 COL13A1Q5TAT6 717 aaPredicted RBP8.7□□□□□ -1.02
SSX4B-202ENST00000619890 PHF8Q9UPP1 1060 aa8.7□□□□□ -1.02
SSX4B-202ENST00000619890 KDM2AQ9Y2K7 1162 aa8.7□□□□□ -1.02
SSX4B-202ENST00000619890 SBNO1A3KN83 1393 aa8.7□□□□□ -1.02
SSX4B-202ENST00000619890 TOPAZ1Q8N9V7 1692 aa8.69□□□□□ -1.02
SSX4B-202ENST00000619890 PRELPP51888 382 aa8.69□□□□□ -1.02
SSX4B-202ENST00000619890 PRAM1Q96QH2 718 aa8.69□□□□□ -1.02
SSX4B-202ENST00000619890 ARHGEF10O15013 1369 aa8.69□□□□□ -1.02
SSX4B-202ENST00000619890 MYOM1P52179 1685 aa8.69□□□□□ -1.02
SSX4B-202ENST00000619890 NRAPQ86VF7 1730 aa8.68□□□□□ -1.02
SSX4B-202ENST00000619890 RGPD8O14715 1765 aaPredicted RBP8.68□□□□□ -1.02
SSX4B-202ENST00000619890 DNAJC5GQ8N7S2 189 aa8.68□□□□□ -1.02
SSX4B-202ENST00000619890 ARXQ96QS3 562 aa8.68□□□□□ -1.02
SSX4B-202ENST00000619890 BCL11BQ9C0K0 894 aaPredicted RBP8.68□□□□□ -1.02
SSX4B-202ENST00000619890 MTFR1LQ9H019 292 aa8.68□□□□□ -1.02
SSX4B-202ENST00000619890 POGKQ9P215 609 aa8.68□□□□□ -1.02
SSX4B-202ENST00000619890 TONSLQ96HA7 1378 aa8.68□□□□□ -1.02
SSX4B-202ENST00000619890 ATP7BP35670 1465 aa8.67□□□□□ -1.02
SSX4B-202ENST00000619890 BARGINQ6ZT62 677 aa8.67□□□□□ -1.02
SSX4B-202ENST00000619890 CASZ1Q86V15 1759 aa8.67□□□□□ -1.02
SSX4B-202ENST00000619890 PHF12Q96QT6 1004 aa8.67□□□□□ -1.02
SSX4B-202ENST00000619890 MAP3K5Q99683 1374 aa8.67□□□□□ -1.02
SSX4B-202ENST00000619890 SHANK3Q9BYB0 1731 aa8.66□□□□□ -1.02
SSX4B-202ENST00000619890 CLSPNQ9HAW4 1339 aa8.66□□□□□ -1.02
SSX4B-202ENST00000619890 L3MBTL2Q969R5 705 aa8.66□□□□□ -1.02
SSX4B-202ENST00000619890 USP35Q9P2H5 1018 aa8.66□□□□□ -1.02
SSX4B-202ENST00000619890 TRAK1Q9UPV9 953 aa8.66□□□□□ -1.02
SSX4B-202ENST00000619890 ABCA3Q99758 1704 aa8.66□□□□□ -1.02
SSX4B-202ENST00000619890 ROCK2O75116 1388 aaKnown RBP8.65□□□□□ -1.02
SSX4B-202ENST00000619890 GPRASP1Q5JY77 1395 aa8.65□□□□□ -1.02
SSX4B-202ENST00000619890 SLC15A2Q16348 729 aa8.65□□□□□ -1.02
SSX4B-202ENST00000619890 SIN3AQ96ST3 1273 aa8.65□□□□□ -1.02
SSX4B-202ENST00000619890 PRDM11Q9NQV5 511 aa8.65□□□□□ -1.02
SSX4B-202ENST00000619890 STRN4Q9NRL3 753 aa8.65□□□□□ -1.02
SSX4B-202ENST00000619890 PCDH10Q9P2E7 1040 aa8.65□□□□□ -1.02
SSX4B-202ENST00000619890 TRPM3Q9HCF6 1732 aaPredicted RBP8.65□□□□□ -1.03
SSX4B-202ENST00000619890 COL14A1Q05707 1796 aaKnown RBP8.64□□□□□ -1.03
SSX4B-202ENST00000619890 C11orf95C9JLR9 678 aaPredicted RBP8.64□□□□□ -1.03
SSX4B-202ENST00000619890 NEUROD1Q13562 356 aa8.64□□□□□ -1.03
SSX4B-202ENST00000619890 PTF1AQ7RTS3 328 aa8.64□□□□□ -1.03
SSX4B-202ENST00000619890 PELP1Q8IZL8 1130 aaKnown RBP8.64□□□□□ -1.03
SSX4B-202ENST00000619890 TNS4Q8IZW8 715 aa8.64□□□□□ -1.03
SSX4B-202ENST00000619890 GPBP1L1Q9HC44 474 aaPredicted RBP8.64□□□□□ -1.03
SSX4B-202ENST00000619890 STK32BQ9NY57 414 aa8.64□□□□□ -1.03
SSX4B-202ENST00000619890 ALS2Q96Q42 1657 aa8.63□□□□□ -1.03
SSX4B-202ENST00000619890 CENPJQ9HC77 1338 aaPredicted RBP8.63□□□□□ -1.03
SSX4B-202ENST00000619890 SAFB2Q14151 953 aaKnown RBP eCLIP8.63□□□□□ -1.03
SSX4B-202ENST00000619890 CHRNA2Q15822 529 aa8.63□□□□□ -1.03
SSX4B-202ENST00000619890 PMFBP1Q8TBY8 1022 aa8.63□□□□□ -1.03
SSX4B-202ENST00000619890 ATP10DQ9P241 1426 aa8.63□□□□□ -1.03
SSX4B-202ENST00000619890 SBNO2Q9Y2G9 1366 aa8.62□□□□□ -1.03
SSX4B-202ENST00000619890 MINK1Q8N4C8 1332 aaPredicted RBP8.62□□□□□ -1.03
SSX4B-202ENST00000619890 PCNTO95613 3336 aa8.62□□□□□ -1.03
SSX4B-202ENST00000619890 WASLO00401 505 aaPredicted RBP8.62□□□□□ -1.03
SSX4B-202ENST00000619890 APLP1P51693 650 aa8.62□□□□□ -1.03
SSX4B-202ENST00000619890 CRYBG1Q9Y4K1 1723 aa8.61□□□□□ -1.03
SSX4B-202ENST00000619890 GRIN3BO60391 1043 aa8.61□□□□□ -1.03
SSX4B-202ENST00000619890 EVA1CP58658 441 aa8.61□□□□□ -1.03
SSX4B-202ENST00000619890 TXNRD1Q16881 649 aa8.61□□□□□ -1.03
SSX4B-202ENST00000619890 NBPF1Q3BBV0 1214 aa8.61□□□□□ -1.03
SSX4B-202ENST00000619890 TCP11L2Q8N4U5 519 aa8.61□□□□□ -1.03
SSX4B-202ENST00000619890 YBX3P16989 372 aaKnown RBP eCLIP8.6□□□□□ -1.03
SSX4B-202ENST00000619890 LARP1Q6PKG0 1096 aaKnown RBP8.6□□□□□ -1.03
SSX4B-202ENST00000619890 HIRIP3Q9BW71 556 aaPredicted RBP8.6□□□□□ -1.03
SSX4B-202ENST00000619890 KIAA0232Q92628 1395 aa8.6□□□□□ -1.03
SSX4B-202ENST00000619890 PRR36Q9H6K5 1346 aa8.59□□□□□ -1.03
SSX4B-202ENST00000619890 PHRF1Q9P1Y6 1649 aaKnown RBP8.59□□□□□ -1.03
SSX4B-202ENST00000619890 NLGN2Q8NFZ4 835 aa8.59□□□□□ -1.03
SSX4B-202ENST00000619890 ZNF526Q8TF50 670 aaPredicted RBP8.59□□□□□ -1.03
SSX4B-202ENST00000619890 TIMELESSQ9UNS1 1208 aa8.59□□□□□ -1.03
SSX4B-202ENST00000619890 THRAP3Q9Y2W1 955 aaKnown RBP8.59□□□□□ -1.03
SSX4B-202ENST00000619890 POLR3AO14802 1390 aaPredicted RBP8.59□□□□□ -1.03
SSX4B-202ENST00000619890 BRD4O60885 1362 aaPredicted RBP8.59□□□□□ -1.03
SSX4B-202ENST00000619890 AKAP12Q02952 1782 aa8.58□□□□□ -1.04
SSX4B-202ENST00000619890 ZC3H6P61129 1189 aaKnown RBP8.58□□□□□ -1.04
SSX4B-202ENST00000619890 ASTLQ6HA08 431 aaPredicted RBP8.58□□□□□ -1.04
SSX4B-202ENST00000619890 KLHL34Q8N239 644 aa8.58□□□□□ -1.04
SSX4B-202ENST00000619890 MS4A3Q96HJ5 214 aa8.58□□□□□ -1.04
SSX4B-202ENST00000619890 PCGF6Q9BYE7 350 aa8.58□□□□□ -1.04
SSX4B-202ENST00000619890 CCDC61Q9Y6R9 512 aa8.58□□□□□ -1.04
SSX4B-202ENST00000619890 EVC2Q86UK5 1308 aa8.57□□□□□ -1.04
SSX4B-202ENST00000619890 PPIP5K1Q6PFW1 1433 aa8.57□□□□□ -1.04
SSX4B-202ENST00000619890 SSH2Q76I76 1423 aa8.57□□□□□ -1.04
SSX4B-202ENST00000619890 KIF3CO14782 793 aa8.57□□□□□ -1.04
SSX4B-202ENST00000619890 JMYQ8N9B5 988 aa8.57□□□□□ -1.04
SSX4B-202ENST00000619890 NUDT16Q96DE0 195 aaKnown RBP8.57□□□□□ -1.04
SSX4B-202ENST00000619890 MON2Q7Z3U7 1717 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms