RNA–Protein interactions for RNA: ENST00000619555.4

TARDBP-221, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-221ENST00000619555 RGPD5Q99666 1765 aa15.87■□□□□ 0.13
TARDBP-221ENST00000619555 PARD3Q8TEW0 1356 aa15.87■□□□□ 0.13
TARDBP-221ENST00000619555 DDB1Q16531 1140 aa15.86■□□□□ 0.13
TARDBP-221ENST00000619555 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.86■□□□□ 0.13
TARDBP-221ENST00000619555 TMC1Q8TDI8 760 aa15.86■□□□□ 0.13
TARDBP-221ENST00000619555 SBNO2Q9Y2G9 1366 aa15.86■□□□□ 0.13
TARDBP-221ENST00000619555 CSB-PGBD3P0DP91 1061 aa15.85■□□□□ 0.13
TARDBP-221ENST00000619555 TONSLQ96HA7 1378 aa15.85■□□□□ 0.13
TARDBP-221ENST00000619555 NME9Q86XW9 330 aa15.84■□□□□ 0.13
TARDBP-221ENST00000619555 SLC12A5Q9H2X9 1139 aa15.84■□□□□ 0.13
TARDBP-221ENST00000619555 MON2Q7Z3U7 1717 aa15.84■□□□□ 0.13
TARDBP-221ENST00000619555 NFAT5O94916 1531 aa15.84■□□□□ 0.13
TARDBP-221ENST00000619555 LRRC37A3O60309 1634 aa15.83■□□□□ 0.13
TARDBP-221ENST00000619555 PEAK1Q9H792 1746 aa15.83■□□□□ 0.13
TARDBP-221ENST00000619555 PTF1AQ7RTS3 328 aa15.83■□□□□ 0.12
TARDBP-221ENST00000619555 CARD10Q9BWT7 1032 aa15.83■□□□□ 0.12
TARDBP-221ENST00000619555 OVOS2A0A0G2JMS6 1433 aa15.83■□□□□ 0.12
TARDBP-221ENST00000619555 OVOS2A0A0J9YW53 1432 aa15.83■□□□□ 0.12
TARDBP-221ENST00000619555 OVOS2Q6IE36 1432 aa15.83■□□□□ 0.12
TARDBP-221ENST00000619555 CD163L1Q9NR16 1453 aa15.83■□□□□ 0.12
TARDBP-221ENST00000619555 RREB1Q92766 1687 aa15.83■□□□□ 0.12
TARDBP-221ENST00000619555 C11orf95C9JLR9 678 aaPredicted RBP15.82■□□□□ 0.12
TARDBP-221ENST00000619555 NBPF14Q5TI25 921 aa15.82■□□□□ 0.12
TARDBP-221ENST00000619555 PIAS4Q8N2W9 510 aaPredicted RBP15.82■□□□□ 0.12
TARDBP-221ENST00000619555 MARCH10Q8NA82 808 aaPredicted RBP15.82■□□□□ 0.12
TARDBP-221ENST00000619555 USP31Q70CQ4 1352 aa15.82■□□□□ 0.12
TARDBP-221ENST00000619555 NUP188Q5SRE5 1749 aa15.82■□□□□ 0.12
TARDBP-221ENST00000619555 SBF2Q86WG5 1849 aa15.82■□□□□ 0.12
TARDBP-221ENST00000619555 HDGFL2Q7Z4V5 671 aaPredicted RBP15.81■□□□□ 0.12
TARDBP-221ENST00000619555 CDCA7Q9BWT1 371 aaPredicted RBP15.81■□□□□ 0.12
TARDBP-221ENST00000619555 WNK3Q9BYP7 1800 aa15.81■□□□□ 0.12
TARDBP-221ENST00000619555 BCL11BQ9C0K0 894 aaPredicted RBP15.79■□□□□ 0.12
TARDBP-221ENST00000619555 EXOC5O00471 708 aa15.78■□□□□ 0.12
TARDBP-221ENST00000619555 ST20-MTHFSA0A0A6YYL1 179 aa15.77■□□□□ 0.12
TARDBP-221ENST00000619555 PLSCR1O15162 318 aa15.77■□□□□ 0.12
TARDBP-221ENST00000619555 TESK2Q96S53 571 aa15.77■□□□□ 0.12
TARDBP-221ENST00000619555 TERF2IPQ9NYB0 399 aa15.77■□□□□ 0.12
TARDBP-221ENST00000619555 USP54Q70EL1 1684 aa15.76■□□□□ 0.11
TARDBP-221ENST00000619555 A0A1W2PP64 1363 aa15.76■□□□□ 0.11
TARDBP-221ENST00000619555 CCDC7Q96M83 1385 aa15.76■□□□□ 0.11
TARDBP-221ENST00000619555 PUS7Q96PZ0 661 aaKnown RBP15.76■□□□□ 0.11
TARDBP-221ENST00000619555 NLRP2Q9NX02 1062 aa15.76■□□□□ 0.11
TARDBP-221ENST00000619555 EDC4Q6P2E9 1401 aaKnown RBP15.76■□□□□ 0.11
TARDBP-221ENST00000619555 ERBB3P21860 1342 aa15.75■□□□□ 0.11
TARDBP-221ENST00000619555 ABCC6O95255 1503 aa15.75■□□□□ 0.11
TARDBP-221ENST00000619555 PROM2Q8N271 834 aa15.75■□□□□ 0.11
TARDBP-221ENST00000619555 BCL9O00512 1426 aa15.75■□□□□ 0.11
TARDBP-221ENST00000619555 LTN1O94822 1766 aa15.75■□□□□ 0.11
TARDBP-221ENST00000619555 ANKRD24Q8TF21 1146 aa15.74■□□□□ 0.11
TARDBP-221ENST00000619555 ANO8Q9HCE9 1232 aaPredicted RBP15.74■□□□□ 0.11
TARDBP-221ENST00000619555 KAT6BQ8WYB5 2073 aa15.74■□□□□ 0.11
TARDBP-221ENST00000619555 KCNQ2O43526 872 aa15.73■□□□□ 0.11
TARDBP-221ENST00000619555 RGPD3A6NKT7 1758 aaPredicted RBP15.72■□□□□ 0.11
TARDBP-221ENST00000619555 RGPD4Q7Z3J3 1758 aa15.72■□□□□ 0.11
TARDBP-221ENST00000619555 TNS2Q63HR2 1409 aa15.71■□□□□ 0.11
TARDBP-221ENST00000619555 IL2RBP14784 551 aa15.71■□□□□ 0.11
TARDBP-221ENST00000619555 ACSBG1Q96GR2 724 aa15.71■□□□□ 0.11
TARDBP-221ENST00000619555 SPON1Q9HCB6 807 aa15.71■□□□□ 0.11
TARDBP-221ENST00000619555 FBLN1P23142 703 aa15.7■□□□□ 0.1
TARDBP-221ENST00000619555 TXNRD1Q16881 649 aa15.7■□□□□ 0.1
TARDBP-221ENST00000619555 IP6K1Q92551 441 aa15.7■□□□□ 0.1
TARDBP-221ENST00000619555 LTV1Q96GA3 475 aaPredicted RBP15.7■□□□□ 0.1
TARDBP-221ENST00000619555 PDGFDQ9GZP0 370 aaPredicted RBP15.7■□□□□ 0.1
TARDBP-221ENST00000619555 NINLQ9Y2I6 1382 aa15.68■□□□□ 0.1
TARDBP-221ENST00000619555 COG3Q96JB2 828 aa15.68■□□□□ 0.1
TARDBP-221ENST00000619555 PPP1R1BQ9UD71 204 aaPredicted RBP15.68■□□□□ 0.1
TARDBP-221ENST00000619555 SLC24A1O60721 1099 aa15.67■□□□□ 0.1
TARDBP-221ENST00000619555 MAP3K19Q56UN5 1328 aa15.67■□□□□ 0.1
TARDBP-221ENST00000619555 STK32BQ9NY57 414 aa15.66■□□□□ 0.1
TARDBP-221ENST00000619555 USP47Q96K76 1375 aa15.65■□□□□ 0.1
TARDBP-221ENST00000619555 NHSQ6T4R5 1651 aa15.65■□□□□ 0.1
TARDBP-221ENST00000619555 ZBTB7AO95365 584 aa15.65■□□□□ 0.1
TARDBP-221ENST00000619555 HOXC9P31274 260 aa15.65■□□□□ 0.1
TARDBP-221ENST00000619555 TMF1P82094 1093 aa15.65■□□□□ 0.1
TARDBP-221ENST00000619555 CASZ1Q86V15 1759 aa15.64■□□□□ 0.1
TARDBP-221ENST00000619555 ANKRD36BQ8N2N9 1353 aa15.64■□□□□ 0.09
TARDBP-221ENST00000619555 AMPHP49418 695 aa15.64■□□□□ 0.09
TARDBP-221ENST00000619555 SLC15A2Q16348 729 aa15.64■□□□□ 0.09
TARDBP-221ENST00000619555 DDX54Q8TDD1 881 aaKnown RBP15.64■□□□□ 0.09
TARDBP-221ENST00000619555 FYB1O15117 783 aa15.63■□□□□ 0.09
TARDBP-221ENST00000619555 GGNBP2Q9H3C7 697 aa15.63■□□□□ 0.09
TARDBP-221ENST00000619555 ATF5Q9Y2D1 282 aaPredicted RBP15.63■□□□□ 0.09
TARDBP-221ENST00000619555 MSH5O43196 834 aa15.62■□□□□ 0.09
TARDBP-221ENST00000619555 RRS1Q15050 365 aaKnown RBP15.62■□□□□ 0.09
TARDBP-221ENST00000619555 RGPD2P0DJD1 1756 aa15.62■□□□□ 0.09
TARDBP-221ENST00000619555 BTAF1O14981 1849 aa15.61■□□□□ 0.09
TARDBP-221ENST00000619555 PTGER2P43116 358 aa15.6■□□□□ 0.09
TARDBP-221ENST00000619555 FAM208AQ9UK61 1670 aaKnown RBP15.6■□□□□ 0.09
TARDBP-221ENST00000619555 LRRC4BQ9NT99 713 aa15.59■□□□□ 0.09
TARDBP-221ENST00000619555 NBPF6Q5VWK0 638 aa15.58■□□□□ 0.08
TARDBP-221ENST00000619555 USHBP1Q8N6Y0 703 aa15.58■□□□□ 0.08
TARDBP-221ENST00000619555 ZCRB1Q8TBF4 217 aaKnown RBP15.58■□□□□ 0.08
TARDBP-221ENST00000619555 NBPF4Q96M43 638 aa15.58■□□□□ 0.08
TARDBP-221ENST00000619555 PRIM1P49642 420 aaKnown RBP15.57■□□□□ 0.08
TARDBP-221ENST00000619555 ZNF827Q17R98 1081 aa15.57■□□□□ 0.08
TARDBP-221ENST00000619555 CDCA8Q53HL2 280 aa15.57■□□□□ 0.08
TARDBP-221ENST00000619555 CARD14Q9BXL6 1004 aa15.57■□□□□ 0.08
TARDBP-221ENST00000619555 MEGF6O75095 1541 aa15.57■□□□□ 0.08
TARDBP-221ENST00000619555 HSP90AB2PQ58FF8 381 aa15.56■□□□□ 0.08
TARDBP-221ENST00000619555 SYTL4Q96C24 671 aaPredicted RBP15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms