RNA–Protein interactions for RNA: ENST00000619533.1

CNTNAP4-208, Transcript of contactin associated protein like 4, human

Gene CNTNAP4, Length 1,856 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNTNAP4-208	ENST00000619533	NPM2	Q86SE8	214 aa	Known RBP	8.62	□□□□□ -1.03
CNTNAP4-208	ENST00000619533	QRICH2	Q9H0J4	1663 aa		8.61	□□□□□ -1.03
CNTNAP4-208	ENST00000619533	SSH2	Q76I76	1423 aa		8.61	□□□□□ -1.03
CNTNAP4-208	ENST00000619533	ABCB7	O75027	752 aa		8.61	□□□□□ -1.03
CNTNAP4-208	ENST00000619533	NLRP6	P59044	892 aa		8.61	□□□□□ -1.03
CNTNAP4-208	ENST00000619533	EN1	Q05925	392 aa	Predicted RBP	8.61	□□□□□ -1.03
CNTNAP4-208	ENST00000619533	LARP1	Q6PKG0	1096 aa	Known RBP	8.61	□□□□□ -1.03
CNTNAP4-208	ENST00000619533	FAM196A	Q6ZSG2	479 aa		8.61	□□□□□ -1.03
CNTNAP4-208	ENST00000619533	THSD7A	Q9UPZ6	1657 aa		8.61	□□□□□ -1.03
CNTNAP4-208	ENST00000619533	CPD	O75976	1380 aa		8.61	□□□□□ -1.03
CNTNAP4-208	ENST00000619533	PSD	A5PKW4	1024 aa	Predicted RBP	8.6	□□□□□ -1.03
CNTNAP4-208	ENST00000619533	BARGIN	Q6ZT62	677 aa		8.6	□□□□□ -1.03
CNTNAP4-208	ENST00000619533	TCP11L2	Q8N4U5	519 aa		8.6	□□□□□ -1.03
CNTNAP4-208	ENST00000619533	ROCK2	O75116	1388 aa	Known RBP	8.6	□□□□□ -1.03
CNTNAP4-208	ENST00000619533	RGPD1	P0DJD0	1748 aa		8.6	□□□□□ -1.03
CNTNAP4-208	ENST00000619533	NRK	Q7Z2Y5	1582 aa		8.6	□□□□□ -1.03
CNTNAP4-208	ENST00000619533	TRIM37	O94972	964 aa		8.6	□□□□□ -1.03
CNTNAP4-208	ENST00000619533	USP6	P35125	1406 aa		8.59	□□□□□ -1.03
CNTNAP4-208	ENST00000619533	ZNF692	Q9BU19	519 aa	Predicted RBP	8.59	□□□□□ -1.03
CNTNAP4-208	ENST00000619533	THRAP3	Q9Y2W1	955 aa	Known RBP	8.59	□□□□□ -1.03
CNTNAP4-208	ENST00000619533	CAMTA1	Q9Y6Y1	1673 aa		8.59	□□□□□ -1.03
CNTNAP4-208	ENST00000619533	APBA3	O96018	575 aa		8.58	□□□□□ -1.04
CNTNAP4-208	ENST00000619533	TRPM1	Q7Z4N2	1603 aa		8.58	□□□□□ -1.04
CNTNAP4-208	ENST00000619533	EZH2	Q15910	746 aa	Known RBP	8.57	□□□□□ -1.04
CNTNAP4-208	ENST00000619533	AATK	Q6ZMQ8	1374 aa		8.57	□□□□□ -1.04
CNTNAP4-208	ENST00000619533	R3HDM1	Q15032	1099 aa	Known RBP	8.57	□□□□□ -1.04
CNTNAP4-208	ENST00000619533	LMO7	Q8WWI1	1683 aa		8.57	□□□□□ -1.04
CNTNAP4-208	ENST00000619533	TTC21B	Q7Z4L5	1316 aa		8.57	□□□□□ -1.04
CNTNAP4-208	ENST00000619533	C11orf95	C9JLR9	678 aa	Predicted RBP	8.56	□□□□□ -1.04
CNTNAP4-208	ENST00000619533	TOM1L2	Q6ZVM7	507 aa		8.56	□□□□□ -1.04
CNTNAP4-208	ENST00000619533	KCNH5	Q8NCM2	988 aa		8.56	□□□□□ -1.04
CNTNAP4-208	ENST00000619533	CAMKK2	Q96RR4	588 aa		8.56	□□□□□ -1.04
CNTNAP4-208	ENST00000619533	DISP2	A7MBM2	1401 aa		8.56	□□□□□ -1.04
CNTNAP4-208	ENST00000619533	CRB1	P82279	1406 aa		8.56	□□□□□ -1.04
CNTNAP4-208	ENST00000619533	TTC21A	Q8NDW8	1320 aa		8.56	□□□□□ -1.04
CNTNAP4-208	ENST00000619533	COL5A2	P05997	1499 aa	Predicted RBP	8.56	□□□□□ -1.04
CNTNAP4-208	ENST00000619533	SLIT3	O75094	1523 aa		8.56	□□□□□ -1.04
CNTNAP4-208	ENST00000619533	SOX12	O15370	315 aa		8.55	□□□□□ -1.04
CNTNAP4-208	ENST00000619533	CSB-PGBD3	P0DP91	1061 aa		8.55	□□□□□ -1.04
CNTNAP4-208	ENST00000619533	CARD11	Q9BXL7	1154 aa		8.55	□□□□□ -1.04
CNTNAP4-208	ENST00000619533	KTN1	Q86UP2	1357 aa	Known RBP	8.55	□□□□□ -1.04
CNTNAP4-208	ENST00000619533	PARD3	Q8TEW0	1356 aa		8.55	□□□□□ -1.04
CNTNAP4-208	ENST00000619533	TNS1	Q9HBL0	1735 aa	Known RBP	8.55	□□□□□ -1.04
CNTNAP4-208	ENST00000619533	NBPF14	Q5TI25	921 aa		8.55	□□□□□ -1.04
CNTNAP4-208	ENST00000619533	DDB1	Q16531	1140 aa		8.54	□□□□□ -1.04
CNTNAP4-208	ENST00000619533	TONSL	Q96HA7	1378 aa		8.54	□□□□□ -1.04
CNTNAP4-208	ENST00000619533	LRP5	O75197	1615 aa		8.54	□□□□□ -1.04
CNTNAP4-208	ENST00000619533	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	8.53	□□□□□ -1.04
CNTNAP4-208	ENST00000619533	ARHGEF25	Q86VW2	580 aa		8.53	□□□□□ -1.04
CNTNAP4-208	ENST00000619533	TMC1	Q8TDI8	760 aa		8.53	□□□□□ -1.04
CNTNAP4-208	ENST00000619533	CDCA7	Q9BWT1	371 aa	Predicted RBP	8.53	□□□□□ -1.04
CNTNAP4-208	ENST00000619533	WDR17	Q8IZU2	1322 aa		8.53	□□□□□ -1.04
CNTNAP4-208	ENST00000619533	PIK3C2A	O00443	1686 aa		8.53	□□□□□ -1.04
CNTNAP4-208	ENST00000619533	CPSF1	Q10570	1443 aa	Known RBP	8.53	□□□□□ -1.04
CNTNAP4-208	ENST00000619533	EP400	Q96L91	3159 aa		8.53	□□□□□ -1.04
CNTNAP4-208	ENST00000619533	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	8.53	□□□□□ -1.04
CNTNAP4-208	ENST00000619533	AXIN2	Q9Y2T1	843 aa		8.53	□□□□□ -1.04
CNTNAP4-208	ENST00000619533	CARD10	Q9BWT7	1032 aa		8.52	□□□□□ -1.05
CNTNAP4-208	ENST00000619533	PARP4	Q9UKK3	1724 aa	Known RBP	8.52	□□□□□ -1.05
CNTNAP4-208	ENST00000619533	AKAP12	Q02952	1782 aa		8.52	□□□□□ -1.05
CNTNAP4-208	ENST00000619533	OVOS2	A0A0G2JMS6	1433 aa		8.52	□□□□□ -1.05
CNTNAP4-208	ENST00000619533	OVOS2	A0A0J9YW53	1432 aa		8.52	□□□□□ -1.05
CNTNAP4-208	ENST00000619533	OVOS2	Q6IE36	1432 aa		8.52	□□□□□ -1.05
CNTNAP4-208	ENST00000619533	FBXO3	Q9UK99	471 aa		8.51	□□□□□ -1.05
CNTNAP4-208	ENST00000619533	SBNO2	Q9Y2G9	1366 aa		8.51	□□□□□ -1.05
CNTNAP4-208	ENST00000619533	COL18A1	P39060	1754 aa		8.51	□□□□□ -1.05
CNTNAP4-208	ENST00000619533	EXOC5	O00471	708 aa		8.51	□□□□□ -1.05
CNTNAP4-208	ENST00000619533	EIF5B	O60841	1220 aa	Known RBP	8.51	□□□□□ -1.05
CNTNAP4-208	ENST00000619533	NME9	Q86XW9	330 aa		8.51	□□□□□ -1.05
CNTNAP4-208	ENST00000619533	TERF2IP	Q9NYB0	399 aa		8.51	□□□□□ -1.05
CNTNAP4-208	ENST00000619533	BCL11B	Q9C0K0	894 aa	Predicted RBP	8.5	□□□□□ -1.05
CNTNAP4-208	ENST00000619533	USP31	Q70CQ4	1352 aa		8.49	□□□□□ -1.05
CNTNAP4-208	ENST00000619533	CCDC7	Q96M83	1385 aa		8.49	□□□□□ -1.05
CNTNAP4-208	ENST00000619533	MARCH10	Q8NA82	808 aa	Predicted RBP	8.49	□□□□□ -1.05
CNTNAP4-208	ENST00000619533	SLC12A5	Q9H2X9	1139 aa		8.49	□□□□□ -1.05
CNTNAP4-208	ENST00000619533	NLRP2	Q9NX02	1062 aa		8.49	□□□□□ -1.05
CNTNAP4-208	ENST00000619533	LRRC37A3	O60309	1634 aa		8.49	□□□□□ -1.05
CNTNAP4-208	ENST00000619533	NFAT5	O94916	1531 aa		8.49	□□□□□ -1.05
CNTNAP4-208	ENST00000619533	PLSCR1	O15162	318 aa		8.49	□□□□□ -1.05
CNTNAP4-208	ENST00000619533	PUS7	Q96PZ0	661 aa	Known RBP	8.49	□□□□□ -1.05
CNTNAP4-208	ENST00000619533	FOXD4L1	Q9NU39	408 aa		8.49	□□□□□ -1.05
CNTNAP4-208	ENST00000619533	RREB1	Q92766	1687 aa		8.48	□□□□□ -1.05
CNTNAP4-208	ENST00000619533	NUP188	Q5SRE5	1749 aa		8.48	□□□□□ -1.05
CNTNAP4-208	ENST00000619533	MON2	Q7Z3U7	1717 aa		8.48	□□□□□ -1.05
CNTNAP4-208	ENST00000619533	EDC4	Q6P2E9	1401 aa	Known RBP	8.48	□□□□□ -1.05
CNTNAP4-208	ENST00000619533	PEAK1	Q9H792	1746 aa		8.47	□□□□□ -1.05
CNTNAP4-208	ENST00000619533	ANKRD24	Q8TF21	1146 aa		8.47	□□□□□ -1.05
CNTNAP4-208	ENST00000619533	SPON1	Q9HCB6	807 aa		8.47	□□□□□ -1.05
CNTNAP4-208	ENST00000619533	PPP1R1B	Q9UD71	204 aa	Predicted RBP	8.47	□□□□□ -1.05
CNTNAP4-208	ENST00000619533	ABCC6	O95255	1503 aa		8.47	□□□□□ -1.05
CNTNAP4-208	ENST00000619533	CD163L1	Q9NR16	1453 aa		8.47	□□□□□ -1.05
CNTNAP4-208	ENST00000619533	RGPD5	Q99666	1765 aa		8.47	□□□□□ -1.05
CNTNAP4-208	ENST00000619533	TRIM26	Q12899	539 aa	Predicted RBP	8.47	□□□□□ -1.05
CNTNAP4-208	ENST00000619533	PTF1A	Q7RTS3	328 aa		8.47	□□□□□ -1.05
CNTNAP4-208	ENST00000619533	WNK3	Q9BYP7	1800 aa		8.47	□□□□□ -1.05
CNTNAP4-208	ENST00000619533	ST20-MTHFS	A0A0A6YYL1	179 aa		8.46	□□□□□ -1.06
CNTNAP4-208	ENST00000619533	KCNQ2	O43526	872 aa		8.46	□□□□□ -1.06
CNTNAP4-208	ENST00000619533	IL2RB	P14784	551 aa		8.46	□□□□□ -1.06
CNTNAP4-208	ENST00000619533	BCL9	O00512	1426 aa		8.46	□□□□□ -1.06
CNTNAP4-208	ENST00000619533		A0A1W2PP64	1363 aa		8.46	□□□□□ -1.06

Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms