RNA–Protein interactions for RNA: ENST00000618999.4

SRGAP3-213, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5 BASIC

Gene SRGAP3, Length 3,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-213ENST00000618999 MED14O60244 1454 aa8.9□□□□□ -0.99
SRGAP3-213ENST00000618999 NSD2O96028 1365 aa8.89□□□□□ -0.99
SRGAP3-213ENST00000618999 KDM4FA0A1W2PPD8 638 aa8.89□□□□□ -0.99
SRGAP3-213ENST00000618999 ZRANB1Q9UGI0 708 aa8.89□□□□□ -0.99
SRGAP3-213ENST00000618999 PIK3R4Q99570 1358 aa8.89□□□□□ -0.99
SRGAP3-213ENST00000618999 MYOM1P52179 1685 aa8.89□□□□□ -0.99
SRGAP3-213ENST00000618999 ZNF428Q96B54 188 aa8.89□□□□□ -0.99
SRGAP3-213ENST00000618999 ESCO1Q5FWF5 840 aa8.88□□□□□ -0.99
SRGAP3-213ENST00000618999 STK24Q9Y6E0 443 aa8.88□□□□□ -0.99
SRGAP3-213ENST00000618999 APAF1O14727 1248 aa8.88□□□□□ -0.99
SRGAP3-213ENST00000618999 NKX1-1Q15270 411 aaPredicted RBP8.88□□□□□ -0.99
SRGAP3-213ENST00000618999 L1TD1Q5T7N2 865 aaKnown RBP8.88□□□□□ -0.99
SRGAP3-213ENST00000618999 KCNV2Q8TDN2 545 aa8.88□□□□□ -0.99
SRGAP3-213ENST00000618999 C20orf194Q5TEA3 1177 aa8.87□□□□□ -0.99
SRGAP3-213ENST00000618999 PLEKHG3A1L390 1219 aa8.87□□□□□ -0.99
SRGAP3-213ENST00000618999 FRAT2O75474 233 aaPredicted RBP8.87□□□□□ -0.99
SRGAP3-213ENST00000618999 DMRT2Q9Y5R5 561 aa8.87□□□□□ -0.99
SRGAP3-213ENST00000618999 NUTM2GQ5VZR2 741 aa8.87□□□□□ -0.99
SRGAP3-213ENST00000618999 POLA2Q14181 598 aa8.86□□□□□ -0.99
SRGAP3-213ENST00000618999 SLKQ9H2G2 1235 aaPredicted RBP8.86□□□□□ -0.99
SRGAP3-213ENST00000618999 TTC21BQ7Z4L5 1316 aa8.86□□□□□ -0.99
SRGAP3-213ENST00000618999 SETD1AO15047 1707 aaKnown RBP8.86□□□□□ -0.99
SRGAP3-213ENST00000618999 CPS1P31327 1500 aa8.86□□□□□ -0.99
SRGAP3-213ENST00000618999 ZMYND15Q9H091 742 aa8.86□□□□□ -0.99
SRGAP3-213ENST00000618999 PTCH1Q13635 1447 aa8.86□□□□□ -0.99
SRGAP3-213ENST00000618999 PSME1Q06323 249 aa8.86□□□□□ -0.99
SRGAP3-213ENST00000618999 PHF8Q9UPP1 1060 aa8.86□□□□□ -0.99
SRGAP3-213ENST00000618999 DIAPH1O60610 1272 aaKnown RBP8.86□□□□□ -0.99
SRGAP3-213ENST00000618999 RRS1Q15050 365 aaKnown RBP8.86□□□□□ -0.99
SRGAP3-213ENST00000618999 FOXD4L5Q5VV16 416 aaPredicted RBP8.86□□□□□ -0.99
SRGAP3-213ENST00000618999 FOXD4L4Q8WXT5 416 aaPredicted RBP8.86□□□□□ -0.99
SRGAP3-213ENST00000618999 ATP7BP35670 1465 aa8.85□□□□□ -0.99
SRGAP3-213ENST00000618999 POLR3AO14802 1390 aaPredicted RBP8.85□□□□□ -0.99
SRGAP3-213ENST00000618999 MAPK8IP3Q9UPT6 1336 aa8.85□□□□□ -0.99
SRGAP3-213ENST00000618999 ATF3P18847 181 aa8.85□□□□□ -0.99
SRGAP3-213ENST00000618999 NLRP6P59044 892 aa8.85□□□□□ -0.99
SRGAP3-213ENST00000618999 RRP7AQ9Y3A4 280 aaKnown RBP8.85□□□□□ -0.99
SRGAP3-213ENST00000618999 EDC4Q6P2E9 1401 aaKnown RBP8.85□□□□□ -0.99
SRGAP3-213ENST00000618999 GLIPR1L2Q4G1C9 344 aa8.85□□□□□ -0.99
SRGAP3-213ENST00000618999 KRI1Q8N9T8 703 aaKnown RBP8.85□□□□□ -0.99
SRGAP3-213ENST00000618999 EMILIN1Q9Y6C2 1016 aa8.85□□□□□ -0.99
SRGAP3-213ENST00000618999 CD163L1Q9NR16 1453 aa8.85□□□□□ -0.99
SRGAP3-213ENST00000618999 ABTB2Q8N961 1025 aa8.84□□□□□ -0.99
SRGAP3-213ENST00000618999 C1orf115Q9H7X2 142 aa8.84□□□□□ -0.99
SRGAP3-213ENST00000618999 POLKQ9UBT6 870 aa8.84□□□□□ -0.99
SRGAP3-213ENST00000618999 DIP2AQ14689 1571 aa8.84□□□□□ -0.99
SRGAP3-213ENST00000618999 E9PSI1 815 aa8.84□□□□□ -0.99
SRGAP3-213ENST00000618999 FOXO3O43524 673 aa8.84□□□□□ -0.99
SRGAP3-213ENST00000618999 XPCQ01831 940 aaPredicted RBP8.84□□□□□ -0.99
SRGAP3-213ENST00000618999 CPSF1Q10570 1443 aaKnown RBP8.83□□□□□ -1
SRGAP3-213ENST00000618999 ABCB7O75027 752 aa8.83□□□□□ -1
SRGAP3-213ENST00000618999 RUNDC1Q96C34 613 aa8.83□□□□□ -1
SRGAP3-213ENST00000618999 C19orf44Q9H6X5 657 aa8.83□□□□□ -1
SRGAP3-213ENST00000618999 DUSP27Q5VZP5 1158 aa8.83□□□□□ -1
SRGAP3-213ENST00000618999 ORAI2Q96SN7 254 aa8.83□□□□□ -1
SRGAP3-213ENST00000618999 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.82□□□□□ -1
SRGAP3-213ENST00000618999 FAM43AQ8N2R8 423 aa8.82□□□□□ -1
SRGAP3-213ENST00000618999 TCP11L2Q8N4U5 519 aa8.82□□□□□ -1
SRGAP3-213ENST00000618999 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.82□□□□□ -1
SRGAP3-213ENST00000618999 INSRP06213 1382 aa8.82□□□□□ -1
SRGAP3-213ENST00000618999 AMPHP49418 695 aa8.82□□□□□ -1
SRGAP3-213ENST00000618999 KNDC1Q76NI1 1749 aa8.82□□□□□ -1
SRGAP3-213ENST00000618999 HMOX1P09601 288 aa8.82□□□□□ -1
SRGAP3-213ENST00000618999 C8orf34Q49A92 452 aa8.82□□□□□ -1
SRGAP3-213ENST00000618999 DCAF8Q5TAQ9 597 aa8.81□□□□□ -1
SRGAP3-213ENST00000618999 NECTIN2Q92692 538 aa8.81□□□□□ -1
SRGAP3-213ENST00000618999 CDK11BP21127 795 aaKnown RBP8.81□□□□□ -1
SRGAP3-213ENST00000618999 PNNQ9H307 717 aaKnown RBP8.81□□□□□ -1
SRGAP3-213ENST00000618999 KDM2BQ8NHM5 1336 aa8.81□□□□□ -1
SRGAP3-213ENST00000618999 USP6P35125 1406 aa8.81□□□□□ -1
SRGAP3-213ENST00000618999 NGEFQ8N5V2 710 aa8.81□□□□□ -1
SRGAP3-213ENST00000618999 RNF25Q96BH1 459 aaPredicted RBP8.81□□□□□ -1
SRGAP3-213ENST00000618999 TTC21AQ8NDW8 1320 aa8.81□□□□□ -1
SRGAP3-213ENST00000618999 BLMP54132 1417 aaPredicted RBP8.8□□□□□ -1
SRGAP3-213ENST00000618999 SLFN5Q08AF3 891 aa8.8□□□□□ -1
SRGAP3-213ENST00000618999 COG6Q9Y2V7 657 aa8.8□□□□□ -1
SRGAP3-213ENST00000618999 ZNF142P52746 1687 aaPredicted RBP8.8□□□□□ -1
SRGAP3-213ENST00000618999 TMEM94Q12767 1356 aa8.8□□□□□ -1
SRGAP3-213ENST00000618999 CLUAP1Q96AJ1 413 aa8.8□□□□□ -1
SRGAP3-213ENST00000618999 NAP1L5Q96NT1 182 aaPredicted RBP8.8□□□□□ -1
SRGAP3-213ENST00000618999 GOLGA6L3A6NEY3 463 aa8.8□□□□□ -1
SRGAP3-213ENST00000618999 SEMA3EO15041 775 aa8.8□□□□□ -1
SRGAP3-213ENST00000618999 BCAR3O75815 825 aa8.79□□□□□ -1
SRGAP3-213ENST00000618999 BCL11BQ9C0K0 894 aaPredicted RBP8.79□□□□□ -1
SRGAP3-213ENST00000618999 ADGRL3Q9HAR2 1447 aa8.79□□□□□ -1
SRGAP3-213ENST00000618999 CDC42BPGQ6DT37 1551 aa8.79□□□□□ -1
SRGAP3-213ENST00000618999 HSP90AA1P07900 732 aaKnown RBP8.79□□□□□ -1
SRGAP3-213ENST00000618999 FTSJ3Q8IY81 847 aaKnown RBP8.79□□□□□ -1
SRGAP3-213ENST00000618999 LTV1Q96GA3 475 aaPredicted RBP8.79□□□□□ -1
SRGAP3-213ENST00000618999 RWDD1Q9H446 243 aaPredicted RBP8.79□□□□□ -1
SRGAP3-213ENST00000618999 GTPBP6O43824 516 aaPredicted RBP8.79□□□□□ -1
SRGAP3-213ENST00000618999 CADPS2Q86UW7 1296 aa8.79□□□□□ -1
SRGAP3-213ENST00000618999 ANKARQ7Z5J8 1434 aa8.79□□□□□ -1
SRGAP3-213ENST00000618999 PRKAR2BP31323 418 aa8.78□□□□□ -1
SRGAP3-213ENST00000618999 ZC3H15Q8WU90 426 aaKnown RBP8.78□□□□□ -1
SRGAP3-213ENST00000618999 PDE3AQ14432 1141 aa8.78□□□□□ -1
SRGAP3-213ENST00000618999 HSP90AB2PQ58FF8 381 aa8.78□□□□□ -1
SRGAP3-213ENST00000618999 HS6ST3Q8IZP7 471 aa8.78□□□□□ -1
SRGAP3-213ENST00000618999 NKTRP30414 1462 aaKnown RBP8.78□□□□□ -1
SRGAP3-213ENST00000618999 KRT28Q7Z3Y7 464 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms